RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 ATP5IP56385 69 aaPredicted RBP11.95□□□□□ -0.5
LTBP3-211ENST00000528966 CLVS1Q8IUQ0 354 aaPredicted RBP11.95□□□□□ -0.5
LTBP3-211ENST00000528966 OR52I2Q8NH67 350 aa11.95□□□□□ -0.5
LTBP3-211ENST00000528966 NTN5Q8WTR8 489 aaPredicted RBP11.95□□□□□ -0.5
LTBP3-211ENST00000528966 IL22RA2Q969J5 263 aa11.95□□□□□ -0.5
LTBP3-211ENST00000528966 TMEM147Q9BVK8 224 aa11.95□□□□□ -0.5
LTBP3-211ENST00000528966 ICOSQ9Y6W8 199 aa11.95□□□□□ -0.5
LTBP3-211ENST00000528966 LY96Q9Y6Y9 160 aa11.95□□□□□ -0.5
LTBP3-211ENST00000528966 CCDC160A6NGH7 325 aa11.94□□□□□ -0.5
LTBP3-211ENST00000528966 CRYM-AS1A6NIL9 109 aa11.94□□□□□ -0.5
LTBP3-211ENST00000528966 LYPD5Q6UWN5 251 aa11.94□□□□□ -0.5
LTBP3-211ENST00000528966 RAB2BQ8WUD1 216 aa11.94□□□□□ -0.5
LTBP3-211ENST00000528966 RPUSD4Q96CM3 377 aaKnown RBP11.94□□□□□ -0.5
LTBP3-211ENST00000528966 C14orf166Q9Y224 244 aaKnown RBP11.94□□□□□ -0.5
LTBP3-211ENST00000528966 TRGV2A0A075B6R0 118 aa11.93□□□□□ -0.5
LTBP3-211ENST00000528966 CCR6P51684 374 aa11.93□□□□□ -0.5
LTBP3-211ENST00000528966 LSM3P62310 102 aaKnown RBP11.93□□□□□ -0.5
LTBP3-211ENST00000528966 SMCO1Q147U7 214 aa11.93□□□□□ -0.5
LTBP3-211ENST00000528966 GPR107Q5VW38 600 aa11.93□□□□□ -0.5
LTBP3-211ENST00000528966 BPIFCQ8NFQ6 507 aa11.93□□□□□ -0.5
LTBP3-211ENST00000528966 YIPF6Q96EC8 236 aa11.93□□□□□ -0.5
LTBP3-211ENST00000528966 SHANK2-AS3Q9BTD1 123 aa11.93□□□□□ -0.5
LTBP3-211ENST00000528966 MTFP1Q9UDX5 166 aa11.93□□□□□ -0.5
LTBP3-211ENST00000528966 A0A087X0K7 114 aa11.92□□□□□ -0.5
LTBP3-211ENST00000528966 PAX4O43316 350 aa11.92□□□□□ -0.5
LTBP3-211ENST00000528966 HPGDSO60760 199 aa11.92□□□□□ -0.5
LTBP3-211ENST00000528966 ZNF324O75467 553 aaPredicted RBP11.92□□□□□ -0.5
LTBP3-211ENST00000528966 RPL7P18124 248 aaKnown RBP11.92□□□□□ -0.5
LTBP3-211ENST00000528966 CNPY1Q3B7I2 92 aa11.92□□□□□ -0.5
LTBP3-211ENST00000528966 FAAP20Q6NZ36 180 aa11.92□□□□□ -0.5
LTBP3-211ENST00000528966 WFDC10BQ8IUB3 73 aa11.92□□□□□ -0.5
LTBP3-211ENST00000528966 FUNDC2Q9BWH2 189 aa11.92□□□□□ -0.5
LTBP3-211ENST00000528966 RNF213Q63HN8 5207 aa11.91□□□□□ -0.5
LTBP3-211ENST00000528966 K7EP13 123 aa11.91□□□□□ -0.5
LTBP3-211ENST00000528966 RAB3DO95716 219 aa11.91□□□□□ -0.5
LTBP3-211ENST00000528966 C1QBP02746 253 aa11.91□□□□□ -0.5
LTBP3-211ENST00000528966 Q6ZSA8 131 aa11.91□□□□□ -0.5
LTBP3-211ENST00000528966 FUT9Q9Y231 359 aa11.91□□□□□ -0.5
LTBP3-211ENST00000528966 PRSS46E5RG02 174 aa11.9□□□□□ -0.5
LTBP3-211ENST00000528966 OXTP01178 125 aa11.9□□□□□ -0.5
LTBP3-211ENST00000528966 S100A7P31151 101 aa11.9□□□□□ -0.5
LTBP3-211ENST00000528966 RAB11AP62491 216 aa11.9□□□□□ -0.5
LTBP3-211ENST00000528966 STEAP1BQ6NZ63 245 aa11.9□□□□□ -0.5
LTBP3-211ENST00000528966 LYZL2Q7Z4W2 148 aa11.9□□□□□ -0.5
LTBP3-211ENST00000528966 TMEM229BQ8NBD8 167 aa11.9□□□□□ -0.5
LTBP3-211ENST00000528966 C11orf72Q8NBR9 251 aa11.9□□□□□ -0.5
LTBP3-211ENST00000528966 OR1S1Q8NH92 325 aa11.9□□□□□ -0.5
LTBP3-211ENST00000528966 GSN-AS1Q9NRJ2 163 aa11.9□□□□□ -0.5
LTBP3-211ENST00000528966 TRGV1A0A0A0MS02 117 aa11.89□□□□□ -0.51
LTBP3-211ENST00000528966 TRAV12-3A0A0B4J271 114 aa11.89□□□□□ -0.51
LTBP3-211ENST00000528966 H3BMQ9 156 aa11.89□□□□□ -0.51
LTBP3-211ENST00000528966 J3KRW8 73 aa11.89□□□□□ -0.51
LTBP3-211ENST00000528966 IAPPP10997 89 aa11.89□□□□□ -0.51
LTBP3-211ENST00000528966 EVI2AP22794 236 aa11.89□□□□□ -0.51
LTBP3-211ENST00000528966 KRTAP10-4P60372 401 aaPredicted RBP11.89□□□□□ -0.51
LTBP3-211ENST00000528966 CCDC190Q86UF4 302 aa11.89□□□□□ -0.51
LTBP3-211ENST00000528966 Q8N814 137 aa11.89□□□□□ -0.51
LTBP3-211ENST00000528966 LRRC20Q8TCA0 184 aa11.89□□□□□ -0.51
LTBP3-211ENST00000528966 PYGO2Q9BRQ0 406 aa11.89□□□□□ -0.51
LTBP3-211ENST00000528966 PAIP2BQ9ULR5 123 aaKnown RBP11.89□□□□□ -0.51
LTBP3-211ENST00000528966 GPR132Q9UNW8 380 aa11.89□□□□□ -0.51
LTBP3-211ENST00000528966 A0A0B4J2A0 478 aa11.88□□□□□ -0.51
LTBP3-211ENST00000528966 PRAC2D3DTV9 90 aa11.88□□□□□ -0.51
LTBP3-211ENST00000528966 TAS2R19P59542 299 aa11.88□□□□□ -0.51
LTBP3-211ENST00000528966 SURF2Q15527 256 aaPredicted RBP11.88□□□□□ -0.51
LTBP3-211ENST00000528966 SHPKQ9UHJ6 478 aa11.88□□□□□ -0.51
LTBP3-211ENST00000528966 HIGD1AQ9Y241 93 aa11.88□□□□□ -0.51
LTBP3-211ENST00000528966 LINC00854A0A1B0GVQ3 168 aa11.87□□□□□ -0.51
LTBP3-211ENST00000528966 MRPS12O15235 138 aaKnown RBP11.87□□□□□ -0.51
LTBP3-211ENST00000528966 IGHV3-53P01767 116 aa11.87□□□□□ -0.51
LTBP3-211ENST00000528966 RAP2BP61225 183 aa11.87□□□□□ -0.51
LTBP3-211ENST00000528966 MRPL23Q16540 153 aaKnown RBP11.87□□□□□ -0.51
LTBP3-211ENST00000528966 CTF1Q16619 201 aa11.87□□□□□ -0.51
LTBP3-211ENST00000528966 NEGR1Q7Z3B1 354 aa11.87□□□□□ -0.51
LTBP3-211ENST00000528966 NAA50Q9GZZ1 169 aaKnown RBP11.87□□□□□ -0.51
LTBP3-211ENST00000528966 ZNF331Q9NQX6 463 aaPredicted RBP11.87□□□□□ -0.51
LTBP3-211ENST00000528966 PRO0255Q9UI72 69 aa11.87□□□□□ -0.51
LTBP3-211ENST00000528966 PSCAO43653 123 aa11.86□□□□□ -0.51
LTBP3-211ENST00000528966 PRAF2O60831 178 aa11.86□□□□□ -0.51
LTBP3-211ENST00000528966 CRYGDP07320 174 aa11.86□□□□□ -0.51
LTBP3-211ENST00000528966 AKR1C4P17516 323 aa11.86□□□□□ -0.51
LTBP3-211ENST00000528966 CRYBA4P53673 196 aa11.86□□□□□ -0.51
LTBP3-211ENST00000528966 ZNF431Q8TF32 576 aaPredicted RBP11.86□□□□□ -0.51
LTBP3-211ENST00000528966 ST6GAL2Q96JF0 529 aa11.86□□□□□ -0.51
LTBP3-211ENST00000528966 PMS2P5A8MQ11 134 aa11.85□□□□□ -0.51
LTBP3-211ENST00000528966 FAM25AB3EWG3 89 aa11.85□□□□□ -0.51
LTBP3-211ENST00000528966 FAM25CB3EWG5 89 aa11.85□□□□□ -0.51
LTBP3-211ENST00000528966 FAM25GB3EWG6 89 aa11.85□□□□□ -0.51
LTBP3-211ENST00000528966 SPINK4O60575 86 aa11.85□□□□□ -0.51
LTBP3-211ENST00000528966 PITX3O75364 302 aa11.85□□□□□ -0.51
LTBP3-211ENST00000528966 HYPMO75409 117 aa11.85□□□□□ -0.51
LTBP3-211ENST00000528966 SNRPCP09234 159 aaKnown RBP11.85□□□□□ -0.51
LTBP3-211ENST00000528966 CT45A10P0DMU9 189 aa11.85□□□□□ -0.51
LTBP3-211ENST00000528966 AKR1C1Q04828 323 aa11.85□□□□□ -0.51
LTBP3-211ENST00000528966 ACOT7LQ6ZUV0 252 aa11.85□□□□□ -0.51
LTBP3-211ENST00000528966 ZBTB8BQ8NAP8 495 aaPredicted RBP11.85□□□□□ -0.51
LTBP3-211ENST00000528966 KLF12Q9Y4X4 402 aa11.85□□□□□ -0.51
LTBP3-211ENST00000528966 LRP2P98164 4655 aa11.85□□□□□ -0.51
LTBP3-211ENST00000528966 OR5G3P0C626 314 aa11.84□□□□□ -0.51
LTBP3-211ENST00000528966 CYP2G1PQ6ZSU1 146 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms