RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 SHANK2-AS3Q9BTD1 123 aa11.73□□□□□ -0.53
NCAPD3-203ENST00000525964 HIST1H2BKO60814 126 aa11.73□□□□□ -0.53
NCAPD3-203ENST00000525964 HIST1H2BJP06899 126 aa11.73□□□□□ -0.53
NCAPD3-203ENST00000525964 HIST1H2BOP23527 126 aa11.73□□□□□ -0.53
NCAPD3-203ENST00000525964 HIST1H2BBP33778 126 aa11.73□□□□□ -0.53
NCAPD3-203ENST00000525964 HIST1H2BDP58876 126 aa11.73□□□□□ -0.53
NCAPD3-203ENST00000525964 HIST1H2BCP62807 126 aa11.73□□□□□ -0.53
NCAPD3-203ENST00000525964 HIST2H2BEQ16778 126 aa11.73□□□□□ -0.53
NCAPD3-203ENST00000525964 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.73□□□□□ -0.53
NCAPD3-203ENST00000525964 HIST1H2BHQ93079 126 aa11.73□□□□□ -0.53
NCAPD3-203ENST00000525964 HIST1H2BNQ99877 126 aa11.73□□□□□ -0.53
NCAPD3-203ENST00000525964 HIST1H2BMQ99879 126 aa11.73□□□□□ -0.53
NCAPD3-203ENST00000525964 ATP6V0E1O15342 81 aa11.72□□□□□ -0.53
NCAPD3-203ENST00000525964 PHLDA1Q8WV24 401 aaPredicted RBP11.72□□□□□ -0.53
NCAPD3-203ENST00000525964 THSD7BQ9C0I4 1608 aa11.72□□□□□ -0.53
NCAPD3-203ENST00000525964 PRB4P10163 310 aaPredicted RBP11.72□□□□□ -0.53
NCAPD3-203ENST00000525964 LINC00205P59089 165 aa11.72□□□□□ -0.53
NCAPD3-203ENST00000525964 OR2K2Q8NGT1 345 aa11.72□□□□□ -0.53
NCAPD3-203ENST00000525964 C1orf159Q96HA4 380 aa11.72□□□□□ -0.53
NCAPD3-203ENST00000525964 H3BUT2 72 aa11.72□□□□□ -0.53
NCAPD3-203ENST00000525964 HOXA3O43365 443 aaPredicted RBP11.72□□□□□ -0.53
NCAPD3-203ENST00000525964 DEFB130BP0DP73 79 aa11.72□□□□□ -0.53
NCAPD3-203ENST00000525964 DEFB130AP0DP74 79 aa11.72□□□□□ -0.53
NCAPD3-203ENST00000525964 ZFHX2Q9C0A1 2572 aaPredicted RBP11.72□□□□□ -0.53
NCAPD3-203ENST00000525964 YPEL3P61236 119 aaPredicted RBP11.71□□□□□ -0.53
NCAPD3-203ENST00000525964 C6orf226Q5I0X4 101 aa11.71□□□□□ -0.53
NCAPD3-203ENST00000525964 C14orf178Q8N769 122 aaPredicted RBP11.71□□□□□ -0.53
NCAPD3-203ENST00000525964 CFHR2P36980 270 aa11.71□□□□□ -0.53
NCAPD3-203ENST00000525964 A0A1B0GV90 55 aa11.71□□□□□ -0.54
NCAPD3-203ENST00000525964 LINC01619G3V211 115 aa11.71□□□□□ -0.54
NCAPD3-203ENST00000525964 PAX4O43316 350 aa11.71□□□□□ -0.54
NCAPD3-203ENST00000525964 ERCC8Q13216 396 aa11.71□□□□□ -0.54
NCAPD3-203ENST00000525964 MAPK1IP1LQ8NDC0 245 aa11.71□□□□□ -0.54
NCAPD3-203ENST00000525964 TRAV8-1A0A0A6YYK1 113 aa11.7□□□□□ -0.54
NCAPD3-203ENST00000525964 RHODO00212 210 aa11.7□□□□□ -0.54
NCAPD3-203ENST00000525964 MS4A6AQ9H2W1 248 aa11.7□□□□□ -0.54
NCAPD3-203ENST00000525964 ZNF581Q9P0T4 197 aa11.7□□□□□ -0.54
NCAPD3-203ENST00000525964 TCF20Q9UGU0 1960 aaKnown RBP11.7□□□□□ -0.54
NCAPD3-203ENST00000525964 IGHV3-64A0A075B6Q5 118 aa11.7□□□□□ -0.54
NCAPD3-203ENST00000525964 LSM4Q9Y4Z0 139 aaKnown RBP11.7□□□□□ -0.54
NCAPD3-203ENST00000525964 FAM90A2PQ658T7 463 aa11.7□□□□□ -0.54
NCAPD3-203ENST00000525964 PIP4P1Q86T03 277 aa11.7□□□□□ -0.54
NCAPD3-203ENST00000525964 DERL1Q9BUN8 251 aa11.7□□□□□ -0.54
NCAPD3-203ENST00000525964 LIME1Q9H400 295 aa11.7□□□□□ -0.54
NCAPD3-203ENST00000525964 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.69□□□□□ -0.54
NCAPD3-203ENST00000525964 M0R2P5 195 aa11.69□□□□□ -0.54
NCAPD3-203ENST00000525964 IGFL4Q6B9Z1 124 aa11.69□□□□□ -0.54
NCAPD3-203ENST00000525964 Q6ZRM9 215 aa11.69□□□□□ -0.54
NCAPD3-203ENST00000525964 PROK2Q9HC23 129 aa11.69□□□□□ -0.54
NCAPD3-203ENST00000525964 A0A0G2JRQ6 117 aa11.69□□□□□ -0.54
NCAPD3-203ENST00000525964 TMEM95Q3KNT9 176 aa11.69□□□□□ -0.54
NCAPD3-203ENST00000525964 SFTA2Q6UW10 78 aa11.69□□□□□ -0.54
NCAPD3-203ENST00000525964 ORAOV1Q8WV07 137 aa11.69□□□□□ -0.54
NCAPD3-203ENST00000525964 LOXP28300 417 aaPredicted RBP11.69□□□□□ -0.54
NCAPD3-203ENST00000525964 MLANAQ16655 118 aa11.69□□□□□ -0.54
NCAPD3-203ENST00000525964 CSTL1Q9H114 145 aa11.69□□□□□ -0.54
NCAPD3-203ENST00000525964 ERG28Q9UKR5 140 aa11.69□□□□□ -0.54
NCAPD3-203ENST00000525964 Q6ZR03 302 aa11.69□□□□□ -0.54
NCAPD3-203ENST00000525964 SHANK1Q9Y566 2161 aa11.69□□□□□ -0.54
NCAPD3-203ENST00000525964 IGHV4-39P01824 125 aa11.68□□□□□ -0.54
NCAPD3-203ENST00000525964 TRAV8-2A0A0B4J237 113 aa11.68□□□□□ -0.54
NCAPD3-203ENST00000525964 HSD52Q0P140 79 aa11.68□□□□□ -0.54
NCAPD3-203ENST00000525964 FHL1Q13642 323 aa11.68□□□□□ -0.54
NCAPD3-203ENST00000525964 C21orf62-AS1Q17RA5 79 aa11.68□□□□□ -0.54
NCAPD3-203ENST00000525964 LINC00311Q8N616 119 aa11.68□□□□□ -0.54
NCAPD3-203ENST00000525964 SS18Q15532 418 aa11.68□□□□□ -0.54
NCAPD3-203ENST00000525964 NUP35Q8NFH5 326 aa11.68□□□□□ -0.54
NCAPD3-203ENST00000525964 MCRIP2Q9BUT9 160 aaKnown RBP11.68□□□□□ -0.54
NCAPD3-203ENST00000525964 C1orf194Q5T5A4 169 aa11.68□□□□□ -0.54
NCAPD3-203ENST00000525964 NDUFAF3Q9BU61 184 aa11.68□□□□□ -0.54
NCAPD3-203ENST00000525964 IGLV1-44P01699 117 aa11.67□□□□□ -0.54
NCAPD3-203ENST00000525964 ARMS2P0C7Q2 107 aa11.67□□□□□ -0.54
NCAPD3-203ENST00000525964 ATXN8Q156A1 80 aa11.67□□□□□ -0.54
NCAPD3-203ENST00000525964 TP53BP1Q12888 1972 aaPredicted RBP11.67□□□□□ -0.54
NCAPD3-203ENST00000525964 PCNX2A6NKB5 2137 aa11.67□□□□□ -0.54
NCAPD3-203ENST00000525964 IGLV3-9A0A075B6K5 115 aa11.67□□□□□ -0.54
NCAPD3-203ENST00000525964 Q86TA4 180 aa11.67□□□□□ -0.54
NCAPD3-203ENST00000525964 VWA8A3KMH1 1905 aa11.67□□□□□ -0.54
NCAPD3-203ENST00000525964 HS3ST6Q96QI5 342 aa11.67□□□□□ -0.54
NCAPD3-203ENST00000525964 TMEM14BQ9NUH8 114 aa11.67□□□□□ -0.54
NCAPD3-203ENST00000525964 TEX36Q5VZQ5 186 aa11.67□□□□□ -0.54
NCAPD3-203ENST00000525964 GSN-AS1Q9NRJ2 163 aa11.67□□□□□ -0.54
NCAPD3-203ENST00000525964 FAM215AQ9Y5M1 114 aa11.67□□□□□ -0.54
NCAPD3-203ENST00000525964 MALRD1Q5VYJ5 2156 aa11.67□□□□□ -0.54
NCAPD3-203ENST00000525964 IGKV1-6A0A0C4DH72 117 aa11.66□□□□□ -0.54
NCAPD3-203ENST00000525964 MST1LQ2TV78 715 aa11.66□□□□□ -0.54
NCAPD3-203ENST00000525964 C11orf68Q9H3H3 251 aaKnown RBP11.66□□□□□ -0.54
NCAPD3-203ENST00000525964 NDUFA4L2Q9NRX3 87 aa11.66□□□□□ -0.54
NCAPD3-203ENST00000525964 XCL2Q9UBD3 114 aa11.66□□□□□ -0.54
NCAPD3-203ENST00000525964 CFPP27918 469 aa11.66□□□□□ -0.54
NCAPD3-203ENST00000525964 ZNF833PQ6ZTB9 187 aa11.66□□□□□ -0.54
NCAPD3-203ENST00000525964 LY6G5BQ8NDX9 201 aa11.66□□□□□ -0.54
NCAPD3-203ENST00000525964 G3V318 75 aa11.66□□□□□ -0.54
NCAPD3-203ENST00000525964 SRSF4Q08170 494 aaKnown RBP11.66□□□□□ -0.54
NCAPD3-203ENST00000525964 PRSS33Q8NF86 280 aa11.66□□□□□ -0.54
NCAPD3-203ENST00000525964 ZNF479Q96JC4 524 aa11.66□□□□□ -0.54
NCAPD3-203ENST00000525964 ZNRD1Q9P1U0 126 aa11.66□□□□□ -0.54
NCAPD3-203ENST00000525964 TRAV13-1A0A0B4J241 112 aa11.65□□□□□ -0.54
NCAPD3-203ENST00000525964 DAD1P61803 113 aa11.65□□□□□ -0.54
NCAPD3-203ENST00000525964 HIST1H2BLQ99880 126 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms