RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 SCGB2A1O75556 95 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 OR7C1O76099 320 aaPredicted RBP4.05□□□□□ -1.76
CD44-218ENST00000525469 NDUFB4O95168 129 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 PPYP01298 95 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 ATP5G1P05496 136 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 ATP5G3P48201 142 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 ERVK11-1P61568 191 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 ATP5G2Q06055 141 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 HES1Q14469 280 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 KISS1Q15726 138 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 ZNF726P1Q15940 193 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 VWC2Q2TAL6 325 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 CEACAM16Q2WEN9 425 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 LINC01545Q5VT33 79 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 PQLC2Q6ZP29 291 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 DGAT2L6Q6ZPD8 337 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 LINC00596Q86U02 117 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 RPP25LQ8N5L8 163 aaKnown RBP4.05□□□□□ -1.76
CD44-218ENST00000525469 TMEM116Q8NCL8 245 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 OR51H1Q8NH63 302 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 H1FXQ92522 213 aaKnown RBP4.05□□□□□ -1.76
CD44-218ENST00000525469 DNAJC30Q96LL9 226 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 C1orf147Q96MC9 270 aaPredicted RBP4.05□□□□□ -1.76
CD44-218ENST00000525469 OXGR1Q96P68 337 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 RTN4RQ9BZR6 473 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 KCNK15Q9H427 330 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 SPANXB1Q9NS25 103 aaPredicted RBP4.05□□□□□ -1.76
CD44-218ENST00000525469 MTCH1Q9NZJ7 389 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 A0A1B0GX51 115 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 A0A1W2PRD5 423 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 A0A1W2PRF3 423 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 A0A1W2PRM7 423 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 ZNF785A8K8V0 405 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 B4DSR2 109 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 TEX22C9J3V5 150 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 SNCGO76070 127 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 LY6HO94772 140 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 APOMO95445 188 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 FKBP2P26885 142 aaKnown RBP4.04□□□□□ -1.76
CD44-218ENST00000525469 OPRK1P41145 380 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 MFAP4P55083 255 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 RPS28P62857 69 aaKnown RBP4.04□□□□□ -1.76
CD44-218ENST00000525469 GNB1P62873 340 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 POU3F1Q03052 451 aaPredicted RBP4.04□□□□□ -1.76
CD44-218ENST00000525469 GAGE2BQ13066 116 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 GAGE2EQ4V326 116 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 C11orf71Q6IPW1 123 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 Q6P435 159 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 MORN3Q6PF18 240 aaPredicted RBP4.04□□□□□ -1.76
CD44-218ENST00000525469 TMEM14EPQ6UXP3 125 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 ZNF793Q6ZN11 406 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 Q6ZSR3 168 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 SSX8Q7RTT4 187 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 TBC1D26Q86UD7 250 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 ZNF575Q86XF7 245 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 OR8B12Q8NGG6 310 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 OR10J6PQ8NGY7 276 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 OR2T6Q8NHC8 308 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 GTSF1Q8WW33 167 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 PPDPFLQ8WWR9 84 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 RAB37Q96AX2 223 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 NDFIP1Q9BT67 221 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 SLC25A2Q9BXI2 301 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 BPESC1Q9GZL8 116 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 OR1A1Q9P1Q5 309 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 DKK2Q9UBU2 259 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 GAGE2DQ9UEU5 116 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 SS18L2Q9UHA2 77 aa4.04□□□□□ -1.76
CD44-218ENST00000525469 TRBV20-1A0A075B6N2 111 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 A0A0A6YYD4 124 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 A0A1W2PQD3 144 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 C4orf51C9J302 202 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 E7EQL1 145 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 FNDC10F2Z333 226 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 LINC01619G3V211 115 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 TNFSF11O14788 317 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 TIMM23O14925 209 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 PDCD6O75340 191 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 IGHV3-7P01780 117 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 IGKV3-11P04433 115 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 IFITM1P13164 125 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 PAX9P55771 341 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 FXYD4P59646 89 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 FOXI1Q12951 378 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 LGALS9BQ3B8N2 356 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 SP6Q3SY56 376 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 DMRTC1Q5HYR2 192 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 CXorf66Q5JRM2 361 aaPredicted RBP4.03□□□□□ -1.76
CD44-218ENST00000525469 IBA57Q5T440 356 aaKnown RBP4.03□□□□□ -1.76
CD44-218ENST00000525469 TMEM78Q5T7P6 136 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 LGALS9CQ6DKI2 356 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 RNASEKQ6P5S7 137 aaKnown RBP4.03□□□□□ -1.76
CD44-218ENST00000525469 Q6ZUT4 128 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 TCF23Q7RTU1 214 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 HMGN2P46Q86SG4 172 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 HAPLN4Q86UW8 402 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 OR5AS1Q8N127 324 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 SMIM20Q8N5G0 67 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 OR1F12Q8NHA8 337 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 OCC1Q8TAD7 63 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms