RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 Q6ZRN7 208 aaPredicted RBP15.67■□□□□ 0.1
PVT1-218ENST00000523328 CYP2G1PQ6ZSU1 146 aa15.67■□□□□ 0.1
PVT1-218ENST00000523328 H3BNG1 76 aa15.66■□□□□ 0.1
PVT1-218ENST00000523328 IL5P05113 134 aa15.66■□□□□ 0.1
PVT1-218ENST00000523328 SMIM18P0DKX4 95 aa15.66■□□□□ 0.1
PVT1-218ENST00000523328 PLP1P60201 277 aa15.66■□□□□ 0.1
PVT1-218ENST00000523328 SPCS2Q15005 226 aa15.66■□□□□ 0.1
PVT1-218ENST00000523328 TMEM128Q5BJH2 165 aa15.66■□□□□ 0.1
PVT1-218ENST00000523328 SPANXN5Q5MJ07 72 aa15.66■□□□□ 0.1
PVT1-218ENST00000523328 RPUSD4Q96CM3 377 aaKnown RBP15.66■□□□□ 0.1
PVT1-218ENST00000523328 H3BP45 60 aa15.65■□□□□ 0.1
PVT1-218ENST00000523328 HYPMO75409 117 aa15.65■□□□□ 0.1
PVT1-218ENST00000523328 ADAP1O75689 374 aa15.65■□□□□ 0.1
PVT1-218ENST00000523328 LINC00315P59091 139 aa15.65■□□□□ 0.1
PVT1-218ENST00000523328 C20orf144Q9BQM9 153 aa15.65■□□□□ 0.1
PVT1-218ENST00000523328 GAGE12BA1L429 117 aa15.64■□□□□ 0.09
PVT1-218ENST00000523328 MRPS12O15235 138 aaKnown RBP15.64■□□□□ 0.09
PVT1-218ENST00000523328 GAGE7O76087 117 aa15.64■□□□□ 0.09
PVT1-218ENST00000523328 LINC00869P0C866 280 aa15.64■□□□□ 0.09
PVT1-218ENST00000523328 GAGE12FP0CL80 117 aa15.64■□□□□ 0.09
PVT1-218ENST00000523328 GAGE12GP0CL81 117 aa15.64■□□□□ 0.09
PVT1-218ENST00000523328 GAGE12IP0CL82 117 aa15.64■□□□□ 0.09
PVT1-218ENST00000523328 INAFM2P0DMQ5 153 aa15.64■□□□□ 0.09
PVT1-218ENST00000523328 TMED4Q7Z7H5 227 aa15.64■□□□□ 0.09
PVT1-218ENST00000523328 OR5G3P0C626 314 aa15.63■□□□□ 0.09
PVT1-218ENST00000523328 XGP55808 180 aa15.63■□□□□ 0.09
PVT1-218ENST00000523328 LYPD1Q8N2G4 141 aa15.63■□□□□ 0.09
PVT1-218ENST00000523328 LRRC20Q8TCA0 184 aa15.63■□□□□ 0.09
PVT1-218ENST00000523328 PARD6GQ9BYG4 376 aaPredicted RBP15.63■□□□□ 0.09
PVT1-218ENST00000523328 STRAPQ9Y3F4 350 aaKnown RBP15.63■□□□□ 0.09
PVT1-218ENST00000523328 SMCO3A2RU48 225 aa15.62■□□□□ 0.09
PVT1-218ENST00000523328 RLN2P04090 185 aa15.62■□□□□ 0.09
PVT1-218ENST00000523328 VAMP1P23763 118 aa15.62■□□□□ 0.09
PVT1-218ENST00000523328 PATE2Q6UY27 113 aa15.62■□□□□ 0.09
PVT1-218ENST00000523328 RSL24D1Q9UHA3 163 aaKnown RBP15.62■□□□□ 0.09
PVT1-218ENST00000523328 PMS2P5A8MQ11 134 aa15.61■□□□□ 0.09
PVT1-218ENST00000523328 FUSP35637 526 aaKnown RBP eCLIP15.61■□□□□ 0.09
PVT1-218ENST00000523328 GFI1BQ5VTD9 330 aa15.61■□□□□ 0.09
PVT1-218ENST00000523328 CCDC28AQ8IWP9 274 aa15.61■□□□□ 0.09
PVT1-218ENST00000523328 SOSTQ9BQB4 213 aa15.61■□□□□ 0.09
PVT1-218ENST00000523328 ZNF331Q9NQX6 463 aaPredicted RBP15.61■□□□□ 0.09
PVT1-218ENST00000523328 PGPEP1Q9NXJ5 209 aa15.61■□□□□ 0.09
PVT1-218ENST00000523328 A0A096LPF7 62 aa15.6■□□□□ 0.09
PVT1-218ENST00000523328 CXCL2P19875 107 aa15.6■□□□□ 0.09
PVT1-218ENST00000523328 SELENOTP62341 195 aa15.6■□□□□ 0.09
PVT1-218ENST00000523328 VSIG2Q96IQ7 327 aa15.6■□□□□ 0.09
PVT1-218ENST00000523328 TMPRSS5Q9H3S3 457 aa15.6■□□□□ 0.09
PVT1-218ENST00000523328 MYCBP2O75592 4640 aa15.6■□□□□ 0.09
PVT1-218ENST00000523328 SNURFLB1AK76 121 aa15.59■□□□□ 0.09
PVT1-218ENST00000523328 HOXB5P09067 269 aa15.59■□□□□ 0.09
PVT1-218ENST00000523328 PRAC2D3DTV9 90 aa15.58■□□□□ 0.08
PVT1-218ENST00000523328 SFT2D2O95562 160 aa15.58■□□□□ 0.08
PVT1-218ENST00000523328 PPP1R1AQ13522 171 aa15.58■□□□□ 0.08
PVT1-218ENST00000523328 Q5VSD8 79 aa15.58■□□□□ 0.08
PVT1-218ENST00000523328 LCN15Q6UWW0 184 aa15.58■□□□□ 0.08
PVT1-218ENST00000523328 DYNC2LI1Q8TCX1 351 aa15.58■□□□□ 0.08
PVT1-218ENST00000523328 SLC50A1Q9BRV3 221 aa15.58■□□□□ 0.08
PVT1-218ENST00000523328 ARL6Q9H0F7 186 aa15.58■□□□□ 0.08
PVT1-218ENST00000523328 ARV1Q9H2C2 271 aa15.58■□□□□ 0.08
PVT1-218ENST00000523328 CCDC59Q9P031 241 aaKnown RBP15.58■□□□□ 0.08
PVT1-218ENST00000523328 SNRPCP09234 159 aaKnown RBP15.57■□□□□ 0.08
PVT1-218ENST00000523328 ANXA7P20073 488 aaKnown RBP15.57■□□□□ 0.08
PVT1-218ENST00000523328 ID3Q02535 119 aa15.57■□□□□ 0.08
PVT1-218ENST00000523328 Q6ZTI0 123 aa15.57■□□□□ 0.08
PVT1-218ENST00000523328 S100A7AQ86SG5 101 aa15.57■□□□□ 0.08
PVT1-218ENST00000523328 FLG2Q5D862 2391 aaPredicted RBP15.57■□□□□ 0.08
PVT1-218ENST00000523328 K7EPK0 472 aa15.56■□□□□ 0.08
PVT1-218ENST00000523328 CCNKO75909 580 aa15.56■□□□□ 0.08
PVT1-218ENST00000523328 FAUP35544 74 aaKnown RBP15.56■□□□□ 0.08
PVT1-218ENST00000523328 POLR2GP62487 172 aaKnown RBP eCLIP15.56■□□□□ 0.08
PVT1-218ENST00000523328 DAZ2Q13117 558 aaKnown RBP15.56■□□□□ 0.08
PVT1-218ENST00000523328 CDPF1Q6NVV7 123 aa15.56■□□□□ 0.08
PVT1-218ENST00000523328 CCDC190Q86UF4 302 aa15.56■□□□□ 0.08
PVT1-218ENST00000523328 ZBTB8BQ8NAP8 495 aaPredicted RBP15.56■□□□□ 0.08
PVT1-218ENST00000523328 PSENENQ9NZ42 101 aa15.56■□□□□ 0.08
PVT1-218ENST00000523328 PTTG2Q9NZH5 202 aa15.56■□□□□ 0.08
PVT1-218ENST00000523328 VPS13BQ7Z7G8 4022 aa15.56■□□□□ 0.08
PVT1-218ENST00000523328 SLC17A3O00476 420 aa15.55■□□□□ 0.08
PVT1-218ENST00000523328 SIVA1O15304 175 aa15.55■□□□□ 0.08
PVT1-218ENST00000523328 RRAS2P62070 204 aaPredicted RBP15.55■□□□□ 0.08
PVT1-218ENST00000523328 TRIM63Q969Q1 353 aa15.55■□□□□ 0.08
PVT1-218ENST00000523328 RNF24Q9Y225 148 aa15.55■□□□□ 0.08
PVT1-218ENST00000523328 FABP12A6NFH5 140 aa15.54■□□□□ 0.08
PVT1-218ENST00000523328 J3KRW8 73 aa15.54■□□□□ 0.08
PVT1-218ENST00000523328 TNFSF8P32971 234 aa15.54■□□□□ 0.08
PVT1-218ENST00000523328 NPVFQ9HCQ7 196 aa15.54■□□□□ 0.08
PVT1-218ENST00000523328 TRAV12-3A0A0B4J271 114 aa15.53■□□□□ 0.08
PVT1-218ENST00000523328 LINC00854A0A1B0GVQ3 168 aa15.53■□□□□ 0.08
PVT1-218ENST00000523328 EREGO14944 169 aa15.53■□□□□ 0.08
PVT1-218ENST00000523328 ERVFC1-1P60608 527 aa15.53■□□□□ 0.08
PVT1-218ENST00000523328 SLC38A11Q08AI6 406 aa15.53■□□□□ 0.08
PVT1-218ENST00000523328 LINC00305Q7Z4B0 112 aa15.53■□□□□ 0.08
PVT1-218ENST00000523328 ZNF431Q8TF32 576 aaPredicted RBP15.53■□□□□ 0.08
PVT1-218ENST00000523328 FRZBQ92765 325 aa15.53■□□□□ 0.08
PVT1-218ENST00000523328 C18orf15Q96N68 181 aa15.53■□□□□ 0.08
PVT1-218ENST00000523328 SLC25A21Q9BQT8 299 aaPredicted RBP15.53■□□□□ 0.08
PVT1-218ENST00000523328 PYGO2Q9BRQ0 406 aa15.53■□□□□ 0.08
PVT1-218ENST00000523328 TNFRSF18Q9Y5U5 241 aa15.53■□□□□ 0.08
PVT1-218ENST00000523328 FNDC10F2Z333 226 aa15.52■□□□□ 0.08
PVT1-218ENST00000523328 H3BTX0 84 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms