RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 TRAV8-1A0A0A6YYK1 113 aa13□□□□□ -0.33
SREK1-212ENST00000522912 LTAP01374 205 aa13□□□□□ -0.33
SREK1-212ENST00000522912 IGLV2-11P01706 119 aa13□□□□□ -0.33
SREK1-212ENST00000522912 TRBV12-3P01733 135 aa13□□□□□ -0.33
SREK1-212ENST00000522912 TRGC1P0CF51 173 aa13□□□□□ -0.33
SREK1-212ENST00000522912 PRB4P10163 310 aaPredicted RBP13□□□□□ -0.33
SREK1-212ENST00000522912 PF4V1P10720 104 aa13□□□□□ -0.33
SREK1-212ENST00000522912 LCNL1Q6ZST4 164 aa13□□□□□ -0.33
SREK1-212ENST00000522912 PDZD2O15018 2839 aa13□□□□□ -0.33
SREK1-212ENST00000522912 RELQ04864 619 aaPredicted RBP13□□□□□ -0.33
SREK1-212ENST00000522912 RPEL1Q2QD12 228 aa13□□□□□ -0.33
SREK1-212ENST00000522912 USMG5Q96IX5 58 aa13□□□□□ -0.33
SREK1-212ENST00000522912 M0R3E3 92 aa12.99□□□□□ -0.33
SREK1-212ENST00000522912 BUB3O43684 328 aa12.99□□□□□ -0.33
SREK1-212ENST00000522912 ZNF580Q9UK33 172 aa12.99□□□□□ -0.33
SREK1-212ENST00000522912 VPREB3Q9UKI3 123 aa12.99□□□□□ -0.33
SREK1-212ENST00000522912 ZNF207O43670 478 aaKnown RBP12.98□□□□□ -0.33
SREK1-212ENST00000522912 IGHV3-11P01762 117 aa12.98□□□□□ -0.33
SREK1-212ENST00000522912 APOHP02749 345 aaPredicted RBP12.98□□□□□ -0.33
SREK1-212ENST00000522912 S100A7P31151 101 aa12.98□□□□□ -0.33
SREK1-212ENST00000522912 ARL3P36405 182 aa12.98□□□□□ -0.33
SREK1-212ENST00000522912 PRR27Q6MZM9 219 aa12.98□□□□□ -0.33
SREK1-212ENST00000522912 FAM231DQ6ZW35 169 aa12.98□□□□□ -0.33
SREK1-212ENST00000522912 Q71RC1 249 aaPredicted RBP12.98□□□□□ -0.33
SREK1-212ENST00000522912 Q86TA4 180 aa12.98□□□□□ -0.33
SREK1-212ENST00000522912 NUDT10Q8NFP7 164 aa12.98□□□□□ -0.33
SREK1-212ENST00000522912 TMEM190Q8WZ59 177 aa12.98□□□□□ -0.33
SREK1-212ENST00000522912 SMIM12Q96EX1 92 aa12.98□□□□□ -0.33
SREK1-212ENST00000522912 NUDT11Q96G61 164 aa12.98□□□□□ -0.33
SREK1-212ENST00000522912 UBE2CO00762 179 aa12.98□□□□□ -0.33
SREK1-212ENST00000522912 FABP9Q0Z7S8 132 aa12.98□□□□□ -0.33
SREK1-212ENST00000522912 BTF3L4Q96K17 158 aa12.98□□□□□ -0.33
SREK1-212ENST00000522912 SERTAD4Q9NUC0 356 aa12.98□□□□□ -0.33
SREK1-212ENST00000522912 TRAV9-1A0A075B6T8 112 aa12.97□□□□□ -0.33
SREK1-212ENST00000522912 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.97□□□□□ -0.33
SREK1-212ENST00000522912 IGHV3-66A0A0C4DH42 116 aa12.97□□□□□ -0.33
SREK1-212ENST00000522912 ZNF705GA8MUZ8 300 aaPredicted RBP12.97□□□□□ -0.33
SREK1-212ENST00000522912 DIRC3C9JPN6 131 aa12.97□□□□□ -0.33
SREK1-212ENST00000522912 RAB9AP51151 201 aa12.97□□□□□ -0.33
SREK1-212ENST00000522912 NDUFA6P56556 154 aa12.97□□□□□ -0.33
SREK1-212ENST00000522912 PRDM13Q9H4Q3 707 aa12.97□□□□□ -0.33
SREK1-212ENST00000522912 U3KQE9 123 aa12.97□□□□□ -0.33
SREK1-212ENST00000522912 IGHV3OR16-13A0A075B7E8 117 aa12.96□□□□□ -0.33
SREK1-212ENST00000522912 IGHV3-74A0A0B4J1X5 117 aa12.96□□□□□ -0.33
SREK1-212ENST00000522912 SMAD7O15105 426 aaKnown RBP12.96□□□□□ -0.33
SREK1-212ENST00000522912 HOXA3O43365 443 aaPredicted RBP12.96□□□□□ -0.33
SREK1-212ENST00000522912 CA1P00915 261 aaPredicted RBP12.96□□□□□ -0.33
SREK1-212ENST00000522912 PSG9Q00887 426 aa12.96□□□□□ -0.33
SREK1-212ENST00000522912 ACTL10Q5JWF8 245 aa12.96□□□□□ -0.33
SREK1-212ENST00000522912 LINC00322Q6ZN03 302 aaPredicted RBP12.96□□□□□ -0.33
SREK1-212ENST00000522912 PRNTQ86SH4 94 aa12.96□□□□□ -0.33
SREK1-212ENST00000522912 METTL26Q96S19 204 aa12.96□□□□□ -0.33
SREK1-212ENST00000522912 AAMDCQ9H7C9 122 aa12.96□□□□□ -0.33
SREK1-212ENST00000522912 IGHV3-49A0A0A0MS15 119 aa12.96□□□□□ -0.34
SREK1-212ENST00000522912 TRBV6-1A0A0K0K1D8 114 aa12.96□□□□□ -0.34
SREK1-212ENST00000522912 GATCO43716 136 aaKnown RBP12.96□□□□□ -0.34
SREK1-212ENST00000522912 AKR1D1P51857 326 aa12.96□□□□□ -0.34
SREK1-212ENST00000522912 TMEM75Q8N9X5 138 aa12.96□□□□□ -0.34
SREK1-212ENST00000522912 SMIM27A0A1W2PRY6 76 aa12.95□□□□□ -0.34
SREK1-212ENST00000522912 TCL1AP56279 114 aa12.95□□□□□ -0.34
SREK1-212ENST00000522912 IGFL4Q6B9Z1 124 aa12.95□□□□□ -0.34
SREK1-212ENST00000522912 OR4X2Q8NGF9 303 aa12.95□□□□□ -0.34
SREK1-212ENST00000522912 CCDC168Q8NDH2 2452 aa12.95□□□□□ -0.34
SREK1-212ENST00000522912 IGHG4P01861 327 aa12.95□□□□□ -0.34
SREK1-212ENST00000522912 FRMD6-AS1P0C7T7 363 aa12.95□□□□□ -0.34
SREK1-212ENST00000522912 C10orf99Q6UWK7 81 aa12.95□□□□□ -0.34
SREK1-212ENST00000522912 UNQ9165/PRO28630Q6UXU0 137 aa12.95□□□□□ -0.34
SREK1-212ENST00000522912 IL17RELQ6ZVW7 336 aa12.95□□□□□ -0.34
SREK1-212ENST00000522912 TMEM183AQ8IXX5 376 aa12.95□□□□□ -0.34
SREK1-212ENST00000522912 ASCL2Q99929 193 aa12.95□□□□□ -0.34
SREK1-212ENST00000522912 A0A087X0K7 114 aa12.94□□□□□ -0.34
SREK1-212ENST00000522912 A0A0G2JLM5 398 aa12.94□□□□□ -0.34
SREK1-212ENST00000522912 ZNF785A8K8V0 405 aa12.94□□□□□ -0.34
SREK1-212ENST00000522912 ZNF253O75346 499 aa12.94□□□□□ -0.34
SREK1-212ENST00000522912 HOXA5P20719 270 aa12.94□□□□□ -0.34
SREK1-212ENST00000522912 PSMB8P28062 276 aa12.94□□□□□ -0.34
SREK1-212ENST00000522912 HLA-DMBP28068 263 aa12.94□□□□□ -0.34
SREK1-212ENST00000522912 PSG3Q16557 428 aa12.94□□□□□ -0.34
SREK1-212ENST00000522912 C1orf194Q5T5A4 169 aa12.94□□□□□ -0.34
SREK1-212ENST00000522912 ZNF331Q9NQX6 463 aaPredicted RBP12.94□□□□□ -0.34
SREK1-212ENST00000522912 PSG8Q9UQ74 426 aa12.94□□□□□ -0.34
SREK1-212ENST00000522912 ITPR2Q14571 2701 aa12.93□□□□□ -0.34
SREK1-212ENST00000522912 C19orf71A6NCJ1 209 aa12.93□□□□□ -0.34
SREK1-212ENST00000522912 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.93□□□□□ -0.34
SREK1-212ENST00000522912 GRAMD2BQ96HH9 432 aa12.93□□□□□ -0.34
SREK1-212ENST00000522912 ZNF702PQ9H963 129 aa12.93□□□□□ -0.34
SREK1-212ENST00000522912 ZNF492Q9P255 531 aa12.93□□□□□ -0.34
SREK1-212ENST00000522912 TRAPPC1Q9Y5R8 145 aa12.93□□□□□ -0.34
SREK1-212ENST00000522912 K7EQM0 130 aa12.93□□□□□ -0.34
SREK1-212ENST00000522912 NDUFA4O00483 81 aa12.93□□□□□ -0.34
SREK1-212ENST00000522912 PRSS22Q9GZN4 317 aa12.93□□□□□ -0.34
SREK1-212ENST00000522912 TLN2Q9Y4G6 2542 aa12.92□□□□□ -0.34
SREK1-212ENST00000522912 SPINK4O60575 86 aa12.92□□□□□ -0.34
SREK1-212ENST00000522912 CSN1S1P47710 185 aa12.92□□□□□ -0.34
SREK1-212ENST00000522912 SIGLECL1Q8N7X8 197 aa12.92□□□□□ -0.34
SREK1-212ENST00000522912 FLNAP21333 2647 aaKnown RBP12.92□□□□□ -0.34
SREK1-212ENST00000522912 IGKV2-40A0A087WW87 121 aaPredicted RBP12.91□□□□□ -0.34
SREK1-212ENST00000522912 IGKV2D-40P01614 121 aaPredicted RBP12.91□□□□□ -0.34
SREK1-212ENST00000522912 CBLN1P23435 193 aa12.91□□□□□ -0.34
SREK1-212ENST00000522912 SLC35B1P78383 322 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms