RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 A0A0J9YX75 114 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 DUXBA0A1W2PPF3 345 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 SLC25A6P12236 298 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 TPT1P13693 172 aaKnown RBP6.66□□□□□ -1.34
SDC2-207ENST00000522911 TSPOP30536 169 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 B2MP61769 119 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 SRPXP78539 464 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 PSG9Q00887 426 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 BTN1A1Q13410 526 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 GAMTQ14353 236 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 SMCO1Q147U7 214 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 FAM222AQ5U5X8 452 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 C1orf158Q8N1D5 194 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.66□□□□□ -1.34
SDC2-207ENST00000522911 OR4D5Q8NGN0 318 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 OR1S1Q8NH92 325 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 LINC00052Q96N35 136 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 TRGV9Q99603 122 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 NMES1Q9C002 83 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 GOLT1BQ9Y3E0 138 aa6.66□□□□□ -1.34
SDC2-207ENST00000522911 C9orf170A2RU37 121 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 ZFP92A6NM28 416 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 LYRM9A8MSI8 78 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 J3QL48 77 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 TAAR5O14804 337 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 PITX3O75364 302 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 SIX6O95475 246 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 HBE1P02100 147 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 FLI1Q01543 452 aaPredicted RBP6.65□□□□□ -1.34
SDC2-207ENST00000522911 RRN3P1Q2M238 152 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 PXDC1Q5TGL8 231 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 EBLN2Q6P2I7 272 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 AMTNQ6UX39 209 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 SVBPQ8N300 66 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 THAP8Q8NA92 274 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 STOML3Q8TAV4 291 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 RNF141Q8WVD5 230 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 IGF2BP2-AS1Q96M15 143 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 GPR82Q96P67 336 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 ZNF471Q9BX82 626 aaPredicted RBP6.65□□□□□ -1.34
SDC2-207ENST00000522911 RPRMQ9NS64 109 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 MBD2Q9UBB5 411 aa6.65□□□□□ -1.34
SDC2-207ENST00000522911 ABCA13Q86UQ4 5058 aa6.65□□□□□ -1.35
SDC2-207ENST00000522911 LOC102723971A0A1B0GUV8 181 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 RNF222A6NCQ9 220 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 M0R2N4 97 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 SCO1O75880 301 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 CDK2AP2O75956 126 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 ZNF90Q03938 601 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 TMEM128Q5BJH2 165 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 C4orf48Q5BLP8 95 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 LCE2CQ5TA81 110 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 C1orf134Q5TEV5 83 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 FAM78BQ5VT40 261 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 GGNBP1Q5YKI7 109 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 UBE2DNLQ8IWF7 75 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 LRTM2Q8N967 370 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 CLRN3Q8NCR9 226 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 SLC35E1Q96K37 410 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 PBDC1Q9BVG4 233 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 SLC35B3Q9H1N7 401 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 RBKSQ9H477 322 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 DOK5Q9P104 306 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 YTHDF2Q9Y5A9 579 aaKnown RBP6.64□□□□□ -1.35
SDC2-207ENST00000522911 APOBP04114 4563 aaKnown RBP6.64□□□□□ -1.35
SDC2-207ENST00000522911 DNAH5Q8TE73 4624 aa6.64□□□□□ -1.35
SDC2-207ENST00000522911 IGKV1OR2-108A0A075B7D4 117 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 C5orf51A6NDU8 294 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 PRSS46E5RG02 174 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 APOC3P02656 99 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 RLN2P04090 185 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 AKR1C4P17516 323 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 S100A7P31151 101 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 GALR1P47211 349 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 DAD1P61803 113 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 RAB11AP62491 216 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 TMEM88Q6PEY1 159 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 LYZL2Q7Z4W2 148 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 IQCF2Q8IXL9 164 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 OR8I2Q8N0Y5 310 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 OR4B1Q8NGF8 309 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 PPP1R1CQ8WVI7 109 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 PCNPQ8WW12 178 aaKnown RBP6.63□□□□□ -1.35
SDC2-207ENST00000522911 C17orf77Q96MU5 243 aa6.63□□□□□ -1.35
SDC2-207ENST00000522911 IGHV3OR16-12A0A075B7B8 117 aa6.62□□□□□ -1.35
SDC2-207ENST00000522911 ZNF98A6NK75 572 aa6.62□□□□□ -1.35
SDC2-207ENST00000522911 DUSP14O95147 198 aaKnown RBP6.62□□□□□ -1.35
SDC2-207ENST00000522911 SNAPINO95295 136 aa6.62□□□□□ -1.35
SDC2-207ENST00000522911 SFT2D2O95562 160 aa6.62□□□□□ -1.35
SDC2-207ENST00000522911 VAMP1P23763 118 aa6.62□□□□□ -1.35
SDC2-207ENST00000522911 EMP1P54849 157 aa6.62□□□□□ -1.35
SDC2-207ENST00000522911 DEFB1P60022 68 aa6.62□□□□□ -1.35
SDC2-207ENST00000522911 LYZP61626 148 aa6.62□□□□□ -1.35
SDC2-207ENST00000522911 PPP1R1AQ13522 171 aa6.62□□□□□ -1.35
SDC2-207ENST00000522911 BAP18Q8IXM2 172 aa6.62□□□□□ -1.35
SDC2-207ENST00000522911 OR1B1Q8NGR6 318 aa6.62□□□□□ -1.35
SDC2-207ENST00000522911 SAT2Q96F10 170 aaPredicted RBP6.62□□□□□ -1.35
SDC2-207ENST00000522911 CIB3Q96Q77 187 aaPredicted RBP6.62□□□□□ -1.35
SDC2-207ENST00000522911 NKX6-2Q9C056 277 aaPredicted RBP6.62□□□□□ -1.35
SDC2-207ENST00000522911 NACAE9PAV3 2078 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms