RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 HDHD3Q9BSH5 251 aaPredicted RBP2.82□□□□□ -1.96
SKP1-210ENST00000522855 CST9LQ9H4G1 147 aa2.82□□□□□ -1.96
SKP1-210ENST00000522855 TMEM106BQ9NUM4 274 aa2.82□□□□□ -1.96
SKP1-210ENST00000522855 ZNF391Q9UJN7 358 aa2.82□□□□□ -1.96
SKP1-210ENST00000522855 WSB1Q9Y6I7 421 aa2.82□□□□□ -1.96
SKP1-210ENST00000522855 CELSR1Q9NYQ6 3014 aa2.82□□□□□ -1.96
SKP1-210ENST00000522855 BAHCC1Q9P281 2608 aa2.82□□□□□ -1.96
SKP1-210ENST00000522855 UNC79Q9P2D8 2635 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 IGKV1D-13A0A0B4J2D9 117 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 IGHV1-18A0A0C4DH31 117 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 ZNF816-ZNF321PA0A0X1KG74 233 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 SERTM2A0A1B0GWG4 89 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 MAP1LC3B2A6NCE7 125 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 ZNF705GA8MUZ8 300 aaPredicted RBP2.81□□□□□ -1.96
SKP1-210ENST00000522855 SERPINE3A8MV23 424 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 TRAPPC2LH3BP13 241 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 GEMIN2O14893 280 aaKnown RBP2.81□□□□□ -1.96
SKP1-210ENST00000522855 PRB1P04280 392 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 ERCC1P07992 297 aaPredicted RBP2.81□□□□□ -1.96
SKP1-210ENST00000522855 OR5G3P0C626 314 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 PGA5P0DJD9 388 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 OR13C7P0DN81 318 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 IGKV1-13P0DP09 117 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 IGFBP3P17936 291 aaPredicted RBP2.81□□□□□ -1.96
SKP1-210ENST00000522855 RPL12P30050 165 aaKnown RBP2.81□□□□□ -1.96
SKP1-210ENST00000522855 SRP14P37108 136 aaKnown RBP2.81□□□□□ -1.96
SKP1-210ENST00000522855 MPV17P39210 176 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 AKR1C3P42330 323 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 CXCL5P42830 114 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 UBE2AP49459 152 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 PPOXP50336 477 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 HERVK_113P61574 105 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 REG3AQ06141 175 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 ZNF266Q14584 549 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 OR8B8Q15620 311 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 PLCXD3Q63HM9 321 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 ZNF705AQ6ZN79 300 aaPredicted RBP2.81□□□□□ -1.96
SKP1-210ENST00000522855 CYP2G1PQ6ZSU1 146 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 LHFPL1Q86WI0 220 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 LYPD6Q86Y78 171 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 Q8N9L7 120 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 OR5L1Q8NGL2 311 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 OR5D14Q8NGL3 314 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 PP6455Q8WZ26 134 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 TMEM158Q8WZ71 300 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 FAM3DQ96BQ1 224 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 GPER1Q99527 375 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 ATP5SQ99766 215 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 VPS25Q9BRG1 176 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 MAP1LC3BQ9GZQ8 125 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 EIF5A2Q9GZV4 153 aaKnown RBP2.81□□□□□ -1.96
SKP1-210ENST00000522855 LAMTOR2Q9Y2Q5 125 aa2.81□□□□□ -1.96
SKP1-210ENST00000522855 IGLV11-55A0A075B6I3 123 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 IGHV2-26A0A0B4J1V2 119 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 IGKV1-9A0A0C4DH69 117 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 CD300LBA8K4G0 201 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 ZNF850A8MQ14 1090 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 TMEM250H0YL14 139 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 CORTO00230 105 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 SIRPB1O00241 398 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 RAB29O14966 203 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 RBFOX2O43251 390 aaKnown RBP eCLIP2.8□□□□□ -1.962e-14■■■■■ 49.8
SKP1-210ENST00000522855 OR2J3O76001 311 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 NRASP01111 189 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 HRASP01112 189 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 HLA-DRB1P01911 266 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 IGLC2P0DOY2 106 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 IGLC3P0DOY3 106 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 OMGP23515 440 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 ZNF93P35789 620 aaPredicted RBP2.8□□□□□ -1.96
SKP1-210ENST00000522855 CDC34P49427 236 aaPredicted RBP2.8□□□□□ -1.96
SKP1-210ENST00000522855 TPPP2P59282 170 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 KRTAP12-2P59991 146 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 YPEL3P61236 119 aaPredicted RBP2.8□□□□□ -1.96
SKP1-210ENST00000522855 BSPH1Q075Z2 132 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 KISS1Q15726 138 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 IGFBP7Q16270 282 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 FBXL19-AS1Q494R0 122 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 TMEM42Q69YG0 159 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 Q6ZSR3 168 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 C1orf174Q8IYL3 243 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 CLDND2Q8NHS1 167 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 SLC25A40Q8TBP6 338 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 KLF14Q8TD94 323 aaPredicted RBP2.8□□□□□ -1.96
SKP1-210ENST00000522855 RNASE6Q93091 150 aaKnown RBP2.8□□□□□ -1.96
SKP1-210ENST00000522855 TMEM230Q96A57 120 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 GNPNAT1Q96EK6 184 aaPredicted RBP2.8□□□□□ -1.96
SKP1-210ENST00000522855 BORCS8Q96FH0 119 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 LINC00167Q96N53 147 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 CIB3Q96Q77 187 aaPredicted RBP2.8□□□□□ -1.96
SKP1-210ENST00000522855 C20orf24Q9BUV8 137 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 VAMP8Q9BV40 100 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 BANF2Q9H503 90 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 OR2S2Q9NQN1 319 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 BET1LQ9NYM9 111 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 NAT8Q9UHE5 227 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 RHBDD3Q9Y3P4 386 aa2.8□□□□□ -1.96
SKP1-210ENST00000522855 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.79□□□□□ -1.96
SKP1-210ENST00000522855 IGKV1-27A0A075B6S5 117 aa2.79□□□□□ -1.96
SKP1-210ENST00000522855 TRBV9A0A0B4J1U6 114 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms