RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 STHQ8IWL8 128 aa4.47□□□□□ -1.69
FAM49B-218ENST00000520887 TMEM170AQ8WVE7 144 aa4.47□□□□□ -1.69
FAM49B-218ENST00000520887 SLC50A1Q9BRV3 221 aa4.47□□□□□ -1.69
FAM49B-218ENST00000520887 GGTLC1Q9BX51 225 aa4.47□□□□□ -1.69
FAM49B-218ENST00000520887 NPCDR1Q9BY65 106 aa4.47□□□□□ -1.69
FAM49B-218ENST00000520887 PARD6GQ9BYG4 376 aaPredicted RBP4.47□□□□□ -1.69
FAM49B-218ENST00000520887 WDR61Q9GZS3 305 aaKnown RBP4.47□□□□□ -1.69
FAM49B-218ENST00000520887 MFFQ9GZY8 342 aa4.47□□□□□ -1.69
FAM49B-218ENST00000520887 AAMDCQ9H7C9 122 aa4.47□□□□□ -1.69
FAM49B-218ENST00000520887 VSIRQ9H7M9 311 aa4.47□□□□□ -1.69
FAM49B-218ENST00000520887 NRN1Q9NPD7 142 aa4.47□□□□□ -1.69
FAM49B-218ENST00000520887 SLC39A9Q9NUM3 307 aa4.47□□□□□ -1.69
FAM49B-218ENST00000520887 PPP1R14DQ9NXH3 145 aa4.47□□□□□ -1.69
FAM49B-218ENST00000520887 CLEC5AQ9NY25 188 aa4.47□□□□□ -1.69
FAM49B-218ENST00000520887 MLXQ9UH92 298 aa4.47□□□□□ -1.69
FAM49B-218ENST00000520887 COL6A5A8TX70 2615 aa4.47□□□□□ -1.69
FAM49B-218ENST00000520887 PMS2P5A8MQ11 134 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 H3BRN7 92 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 TEX46H3BTG2 121 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 OR7C2O60412 319 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 LYL1P12980 280 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 CXCL2P19875 107 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 PLP1P60201 277 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 RHOBP62745 196 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 ZNF345Q14585 488 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 USF2Q15853 346 aaPredicted RBP4.46□□□□□ -1.7
FAM49B-218ENST00000520887 GUK1Q16774 197 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 FFAR4Q5NUL3 377 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 EBLN2Q6P2I7 272 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 C16orf54Q6UWD8 224 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 LCN15Q6UWW0 184 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 HAPLN4Q86UW8 402 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 GBGT1Q8N5D6 347 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 HYLS1Q96M11 299 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 MGST2Q99735 147 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 FAM110AQ9BQ89 295 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 SLC25A39Q9BZJ4 359 aaPredicted RBP4.46□□□□□ -1.7
FAM49B-218ENST00000520887 SEPSECSQ9HD40 501 aaKnown RBP4.46□□□□□ -1.7
FAM49B-218ENST00000520887 DNAJC4Q9NNZ3 241 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 RPRMQ9NS64 109 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 MRPL36Q9P0J6 103 aaKnown RBP4.46□□□□□ -1.7
FAM49B-218ENST00000520887 TIMM9Q9Y5J7 89 aa4.46□□□□□ -1.7
FAM49B-218ENST00000520887 IGKV1D-37A0A075B6S9 117 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 LOC102724200A0A096LPH7 203 aaPredicted RBP4.45□□□□□ -1.7
FAM49B-218ENST00000520887 ZNF98A6NK75 572 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 HMSDA8MTL9 139 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 ISLRO14498 428 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 BUB3O43684 328 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 TPT1P13693 172 aaKnown RBP4.45□□□□□ -1.7
FAM49B-218ENST00000520887 M6PRP20645 277 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 CSN1S1P47710 185 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 PSMB3P49720 205 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 RAB2AP61019 212 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 SERF2P84101 59 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 ZFP69Q49AA0 526 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 TMEM41BQ5BJD5 291 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 FAM78BQ5VT40 261 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 SPATA31B1PQ5VZV4 182 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 MIC13Q5XKP0 118 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 IQCF2Q8IXL9 164 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 HSD17B11Q8NBQ5 300 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 STOML3Q8TAV4 291 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 GLMPQ8WWB7 406 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 DAZAP1Q96EP5 407 aaKnown RBP4.45□□□□□ -1.7
FAM49B-218ENST00000520887 PSMG3Q9BT73 122 aaPredicted RBP4.45□□□□□ -1.7
FAM49B-218ENST00000520887 SHANK2-AS3Q9BTD1 123 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 ZNF471Q9BX82 626 aaPredicted RBP4.45□□□□□ -1.7
FAM49B-218ENST00000520887 C1QTNF4Q9BXJ3 329 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 MS4A6AQ9H2W1 248 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 C11orf1Q9H5F2 150 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 SRD5A3Q9H8P0 318 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 TNFSF18Q9UNG2 199 aa4.45□□□□□ -1.7
FAM49B-218ENST00000520887 LSM4Q9Y4Z0 139 aaKnown RBP4.45□□□□□ -1.7
FAM49B-218ENST00000520887 FBN1P35555 2871 aaKnown RBP4.45□□□□□ -1.7
FAM49B-218ENST00000520887 IGKV1OR2-108A0A075B7D4 117 aa4.44□□□□□ -1.7
FAM49B-218ENST00000520887 DUSP14O95147 198 aaKnown RBP4.44□□□□□ -1.7
FAM49B-218ENST00000520887 ZNF688P0C7X2 276 aa4.44□□□□□ -1.7
FAM49B-218ENST00000520887 NHLRC4P0CG21 123 aaPredicted RBP4.44□□□□□ -1.7
FAM49B-218ENST00000520887 IGHV4-30-4P0DP06 118 aa4.44□□□□□ -1.7
FAM49B-218ENST00000520887 GATA2P23769 480 aaPredicted RBP4.44□□□□□ -1.7
FAM49B-218ENST00000520887 CDC34P49427 236 aaPredicted RBP4.44□□□□□ -1.7
FAM49B-218ENST00000520887 DEFB131AP59861 70 aa4.44□□□□□ -1.7
FAM49B-218ENST00000520887 UBE2L3P68036 154 aaKnown RBP4.44□□□□□ -1.7
FAM49B-218ENST00000520887 PSG9Q00887 426 aa4.44□□□□□ -1.7
FAM49B-218ENST00000520887 ARL16Q0P5N6 197 aa4.44□□□□□ -1.7
FAM49B-218ENST00000520887 PSMG4Q5JS54 123 aa4.44□□□□□ -1.7
FAM49B-218ENST00000520887 MORN3Q6PF18 240 aaPredicted RBP4.44□□□□□ -1.7
FAM49B-218ENST00000520887 IL34Q6ZMJ4 242 aa4.44□□□□□ -1.7
FAM49B-218ENST00000520887 PQLC2Q6ZP29 291 aa4.44□□□□□ -1.7
FAM49B-218ENST00000520887 TCTE3Q8IZS6 198 aa4.44□□□□□ -1.7
FAM49B-218ENST00000520887 ZNF738Q8NE65 137 aa4.44□□□□□ -1.7
FAM49B-218ENST00000520887 LINC00052Q96N35 136 aa4.44□□□□□ -1.7
FAM49B-218ENST00000520887 RNF126Q9BV68 326 aa4.44□□□□□ -1.7
FAM49B-218ENST00000520887 SCRT1Q9BWW7 348 aa4.44□□□□□ -1.7
FAM49B-218ENST00000520887 ACTR3CQ9C0K3 210 aaPredicted RBP4.44□□□□□ -1.7
FAM49B-218ENST00000520887 UBQLN2Q9UHD9 624 aa4.44□□□□□ -1.7
FAM49B-218ENST00000520887 PRELID1Q9Y255 219 aa4.44□□□□□ -1.7
FAM49B-218ENST00000520887 UMAD1C9J7I0 102 aa4.43□□□□□ -1.7
FAM49B-218ENST00000520887 K7EQM0 130 aa4.43□□□□□ -1.7
FAM49B-218ENST00000520887 UBE2CO00762 179 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms