RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, human

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSR1-211	ENST00000520846	UHRF1BP1	Q6BDS2	1440 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846		H7C1C5	153 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	IFNA14	P01570	189 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	APOA2	P02652	100 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	IFNA4	P05014	189 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	LCN6	P62502	163 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	KLRD1	Q13241	179 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	SPATA45	Q537H7	98 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	DHRS4L2	Q6PKH6	230 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	EXOC3-AS1	Q8N2X6	119 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	PPTC7	Q8NI37	304 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	ZHX1-C8orf76	Q96EF9	292 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	MAP1LC3B	Q9GZQ8	125 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	WFDC10A	Q9H1F0	79 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	CACYBP	Q9HB71	228 aa	Known RBP	0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	NIT2	Q9NQR4	276 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	MDN1	Q9NU22	5596 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	NCAPD3	P42695	1498 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	hDV103S1	A0JD37	113 aa		0.4	□□□□□ -2.35
MSR1-211	ENST00000520846	RIIAD1	A6NNX1	92 aa		0.4	□□□□□ -2.35
MSR1-211	ENST00000520846	PHB	P35232	272 aa		0.4	□□□□□ -2.35
MSR1-211	ENST00000520846	INSL3	P51460	131 aa		0.4	□□□□□ -2.35
MSR1-211	ENST00000520846	TMBIM6	P55061	237 aa		0.4	□□□□□ -2.35
MSR1-211	ENST00000520846	ARPP19	P56211	112 aa		0.4	□□□□□ -2.35
MSR1-211	ENST00000520846	GNG5	P63218	68 aa		0.4	□□□□□ -2.35
MSR1-211	ENST00000520846	AKR1C8P	Q5T2L2	129 aa		0.4	□□□□□ -2.35
MSR1-211	ENST00000520846	TMEM14EP	Q6UXP3	125 aa		0.4	□□□□□ -2.35
MSR1-211	ENST00000520846	LRRC18	Q8N456	261 aa		0.4	□□□□□ -2.35
MSR1-211	ENST00000520846	TCEAL2	Q9H3H9	227 aa	Predicted RBP	0.4	□□□□□ -2.35
MSR1-211	ENST00000520846	SSR3	Q9UNL2	185 aa		0.4	□□□□□ -2.35
MSR1-211	ENST00000520846	ZDBF2	Q9HCK1	2354 aa		0.39	□□□□□ -2.35
MSR1-211	ENST00000520846	TRAV23DV6	A0A075B6W5	121 aa		0.39	□□□□□ -2.35
MSR1-211	ENST00000520846	TRAV5	A0A0B4J249	113 aa		0.39	□□□□□ -2.35
MSR1-211	ENST00000520846	ATP5H	O75947	161 aa		0.39	□□□□□ -2.35
MSR1-211	ENST00000520846	TRGC2	P03986	189 aa		0.39	□□□□□ -2.35
MSR1-211	ENST00000520846	CXCL1	P09341	107 aa		0.39	□□□□□ -2.35
MSR1-211	ENST00000520846	SPTB	P11277	2137 aa		0.39	□□□□□ -2.35
MSR1-211	ENST00000520846	OGN	P20774	298 aa	Known RBP	0.39	□□□□□ -2.35
MSR1-211	ENST00000520846	ARF6	P62330	175 aa		0.39	□□□□□ -2.35
MSR1-211	ENST00000520846	HACD4	Q5VWC8	232 aa		0.39	□□□□□ -2.35
MSR1-211	ENST00000520846	PAIP2	Q9BPZ3	127 aa	Known RBP	0.39	□□□□□ -2.35
MSR1-211	ENST00000520846	PBDC1	Q9BVG4	233 aa		0.39	□□□□□ -2.35
MSR1-211	ENST00000520846	SH3BGRL3	Q9H299	93 aa		0.39	□□□□□ -2.35
MSR1-211	ENST00000520846	LYRM2	Q9NU23	88 aa	Predicted RBP	0.39	□□□□□ -2.35
MSR1-211	ENST00000520846	TRPM1	Q7Z4N2	1603 aa		0.38	□□□□□ -2.35
MSR1-211	ENST00000520846	COL24A1	Q17RW2	1714 aa		0.38	□□□□□ -2.35
MSR1-211	ENST00000520846	NAV3	Q8IVL0	2385 aa		0.38	□□□□□ -2.35
MSR1-211	ENST00000520846		K7EIL1	84 aa		0.38	□□□□□ -2.35
MSR1-211	ENST00000520846	RER1	O15258	196 aa		0.38	□□□□□ -2.35
MSR1-211	ENST00000520846	LYRM1	O43325	122 aa		0.38	□□□□□ -2.35
MSR1-211	ENST00000520846	HIST1H2BK	O60814	126 aa		0.38	□□□□□ -2.35
MSR1-211	ENST00000520846	HIST1H2BJ	P06899	126 aa		0.38	□□□□□ -2.35
MSR1-211	ENST00000520846	MRPS15	P82914	257 aa	Known RBP	0.38	□□□□□ -2.35
MSR1-211	ENST00000520846	EIF3I	Q13347	325 aa	Known RBP	0.38	□□□□□ -2.35
MSR1-211	ENST00000520846	CIRBP	Q14011	172 aa	Known RBP	0.38	□□□□□ -2.35
MSR1-211	ENST00000520846	GLIPR1L1	Q6UWM5	242 aa		0.38	□□□□□ -2.35
MSR1-211	ENST00000520846	MALSU1	Q96EH3	234 aa		0.38	□□□□□ -2.35
MSR1-211	ENST00000520846	GPX7	Q96SL4	187 aa	Predicted RBP	0.38	□□□□□ -2.35
MSR1-211	ENST00000520846	RNF11	Q9Y3C5	154 aa		0.38	□□□□□ -2.35
MSR1-211	ENST00000520846	CAMSAP2	Q08AD1	1489 aa		0.37	□□□□□ -2.35
MSR1-211	ENST00000520846		A0A0D9SG42	100 aa		0.37	□□□□□ -2.35
MSR1-211	ENST00000520846	C9orf170	A2RU37	121 aa		0.37	□□□□□ -2.35
MSR1-211	ENST00000520846		K7ERJ3	54 aa		0.37	□□□□□ -2.35
MSR1-211	ENST00000520846	FOXA3	P55318	350 aa	Predicted RBP	0.37	□□□□□ -2.35
MSR1-211	ENST00000520846	SNCB	Q16143	134 aa		0.37	□□□□□ -2.35
MSR1-211	ENST00000520846	ATOH7	Q8N100	152 aa		0.37	□□□□□ -2.35
MSR1-211	ENST00000520846	OR13C6P	Q8NH95	151 aa		0.37	□□□□□ -2.35
MSR1-211	ENST00000520846	GINS3	Q9BRX5	216 aa		0.37	□□□□□ -2.35
MSR1-211	ENST00000520846	NISCH	Q9Y2I1	1504 aa		0.37	□□□□□ -2.35
MSR1-211	ENST00000520846	CACNA1E	Q15878	2313 aa		0.37	□□□□□ -2.35
MSR1-211	ENST00000520846	ERBIN	Q96RT1	1412 aa		0.37	□□□□□ -2.35
MSR1-211	ENST00000520846		A0A096LPI6	279 aa		0.36	□□□□□ -2.35
MSR1-211	ENST00000520846	C5orf67	F2Z3F1	127 aa		0.36	□□□□□ -2.35
MSR1-211	ENST00000520846	IFNA1	P01562	189 aa		0.36	□□□□□ -2.35
MSR1-211	ENST00000520846	PRH1	P02810	166 aa		0.36	□□□□□ -2.35
MSR1-211	ENST00000520846	PPP1R2	P41236	205 aa		0.36	□□□□□ -2.35
MSR1-211	ENST00000520846	N4BP2	Q86UW6	1770 aa	Predicted RBP	0.36	□□□□□ -2.35
MSR1-211	ENST00000520846	CD109	Q6YHK3	1445 aa		0.36	□□□□□ -2.35
MSR1-211	ENST00000520846	KCP	Q6ZWJ8	1503 aa		0.35	□□□□□ -2.35
MSR1-211	ENST00000520846	TRBV30	A0A0K0K1B3	111 aa		0.35	□□□□□ -2.35
MSR1-211	ENST00000520846	ODAM	A1E959	279 aa		0.35	□□□□□ -2.35
MSR1-211	ENST00000520846	NUPR2	A6NF83	97 aa		0.35	□□□□□ -2.35
MSR1-211	ENST00000520846	GPR31	O00270	319 aa		0.35	□□□□□ -2.35
MSR1-211	ENST00000520846	CD14	P08571	375 aa		0.35	□□□□□ -2.35
MSR1-211	ENST00000520846	IDO1	P14902	403 aa		0.35	□□□□□ -2.35
MSR1-211	ENST00000520846	MSMO1	Q15800	293 aa		0.35	□□□□□ -2.35
MSR1-211	ENST00000520846	C1orf140	Q5VVS0	124 aa		0.35	□□□□□ -2.35
MSR1-211	ENST00000520846		Q6ZS92	163 aa		0.35	□□□□□ -2.35
MSR1-211	ENST00000520846	NUP35	Q8NFH5	326 aa		0.35	□□□□□ -2.35
MSR1-211	ENST00000520846	PLAC8	Q9NZF1	115 aa		0.35	□□□□□ -2.35
MSR1-211	ENST00000520846	SS18L2	Q9UHA2	77 aa		0.35	□□□□□ -2.35
MSR1-211	ENST00000520846	STOML2	Q9UJZ1	356 aa		0.35	□□□□□ -2.35
MSR1-211	ENST00000520846	ASB4	Q9Y574	426 aa		0.35	□□□□□ -2.35
MSR1-211	ENST00000520846	MYH2	Q9UKX2	1941 aa		0.34	□□□□□ -2.35
MSR1-211	ENST00000520846	KNTC1	P50748	2209 aa		0.34	□□□□□ -2.35
MSR1-211	ENST00000520846	BCL9	O00512	1426 aa		0.34	□□□□□ -2.36
MSR1-211	ENST00000520846	IGHV3-33	P01772	117 aa		0.34	□□□□□ -2.36
MSR1-211	ENST00000520846	FXYD6P3	P58550	94 aa		0.34	□□□□□ -2.36
MSR1-211	ENST00000520846	HBB	P68871	147 aa		0.34	□□□□□ -2.36
MSR1-211	ENST00000520846	RPL19	P84098	196 aa	Known RBP	0.34	□□□□□ -2.36

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms