RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 H3BUX3 64 aa6.56□□□□□ -1.36
HMGB4-203ENST00000519684 IGLV2-11P01706 119 aa6.56□□□□□ -1.36
HMGB4-203ENST00000519684 APCSP02743 223 aa6.56□□□□□ -1.36
HMGB4-203ENST00000519684 FRMD6-AS1P0C7T7 363 aa6.56□□□□□ -1.36
HMGB4-203ENST00000519684 COL8A1P27658 744 aa6.56□□□□□ -1.36
HMGB4-203ENST00000519684 CRIP2P52943 208 aaPredicted RBP6.56□□□□□ -1.36
HMGB4-203ENST00000519684 DNLZQ5SXM8 178 aa6.56□□□□□ -1.36
HMGB4-203ENST00000519684 TOMM20LQ6UXN7 152 aa6.56□□□□□ -1.36
HMGB4-203ENST00000519684 ATP5L2Q7Z4Y8 100 aa6.56□□□□□ -1.36
HMGB4-203ENST00000519684 GSN-AS1Q9NRJ2 163 aa6.56□□□□□ -1.36
HMGB4-203ENST00000519684 PSG8Q9UQ74 426 aa6.56□□□□□ -1.36
HMGB4-203ENST00000519684 WNK2Q9Y3S1 2297 aa6.56□□□□□ -1.36
HMGB4-203ENST00000519684 A1L4Q6 167 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 CIARTQ8N365 385 aaPredicted RBP6.55□□□□□ -1.36
HMGB4-203ENST00000519684 LINC01356Q8N9X3 169 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 CCDC140Q96MF4 163 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 ATP6V0BQ99437 205 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 PRSS22Q9GZN4 317 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 GFRA4Q9GZZ7 299 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 SOX21Q9Y651 276 aaPredicted RBP6.55□□□□□ -1.36
HMGB4-203ENST00000519684 IGSF10Q6WRI0 2623 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 IGHV3OR16-8A0A075B7F1 116 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 A6NDX4 124 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 ZNF785A8K8V0 405 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 ZNF253O75346 499 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 TRGV3P03979 118 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 CT45A10P0DMU9 189 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 TPPP2P59282 170 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 Q0VG73 95 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 LINC00322Q6ZN03 302 aaPredicted RBP6.55□□□□□ -1.36
HMGB4-203ENST00000519684 TMEM256Q8N2U0 113 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 ZFAND3Q9H8U3 227 aa6.55□□□□□ -1.36
HMGB4-203ENST00000519684 A0A1B0GUS0 222 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 FBLL1A6NHQ2 334 aaKnown RBP6.54□□□□□ -1.36
HMGB4-203ENST00000519684 M0R3E3 92 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 JOSD1Q15040 202 aaPredicted RBP6.54□□□□□ -1.36
HMGB4-203ENST00000519684 C19orf54Q5BKX5 351 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 OR10J3Q5JRS4 329 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 TCF24Q7RTU0 167 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 OR2D3Q8NGH3 330 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 OR5R1Q8NH85 324 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 NOL4LQ96MY1 436 aaPredicted RBP6.54□□□□□ -1.36
HMGB4-203ENST00000519684 METTL26Q96S19 204 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 LINC00527Q9UJ94 153 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 ABCA2Q9BZC7 2435 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 FAM231BA6NCW3 169 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 H3BUA1 57 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 IGF1P05019 195 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 PAFAH1B2P68402 229 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 HBBP68871 147 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 KIAA1644Q3SXP7 199 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 RBPMS2Q6ZRY4 209 aaKnown RBP6.54□□□□□ -1.36
HMGB4-203ENST00000519684 ZC2HC1AQ96GY0 325 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 PGLYRP4Q96LB8 373 aa6.54□□□□□ -1.36
HMGB4-203ENST00000519684 A0A087X0K7 114 aa6.53□□□□□ -1.36
HMGB4-203ENST00000519684 NPIPB6E9PJ23 425 aa6.53□□□□□ -1.36
HMGB4-203ENST00000519684 J3QLI3 93 aa6.53□□□□□ -1.36
HMGB4-203ENST00000519684 SERF1AO75920 110 aa6.53□□□□□ -1.36
HMGB4-203ENST00000519684 IGHG2P01859 326 aa6.53□□□□□ -1.36
HMGB4-203ENST00000519684 SRIP30626 198 aa6.53□□□□□ -1.36
HMGB4-203ENST00000519684 CAMPP49913 170 aa6.53□□□□□ -1.36
HMGB4-203ENST00000519684 C1orf194Q5T5A4 169 aa6.53□□□□□ -1.36
HMGB4-203ENST00000519684 SAMD10Q9BYL1 202 aa6.53□□□□□ -1.36
HMGB4-203ENST00000519684 SMAD5-AS1Q9Y6J3 95 aa6.53□□□□□ -1.36
HMGB4-203ENST00000519684 CHEK1O14757 476 aa6.53□□□□□ -1.36
HMGB4-203ENST00000519684 ESDP10768 282 aa6.53□□□□□ -1.36
HMGB4-203ENST00000519684 ARL3P36405 182 aa6.53□□□□□ -1.36
HMGB4-203ENST00000519684 ZNF124Q15973 351 aa6.53□□□□□ -1.36
HMGB4-203ENST00000519684 SAPCD1Q5SSQ6 148 aa6.53□□□□□ -1.36
HMGB4-203ENST00000519684 SLC50A1Q9BRV3 221 aa6.53□□□□□ -1.36
HMGB4-203ENST00000519684 CFAP46Q8IYW2 2715 aa6.52□□□□□ -1.37
HMGB4-203ENST00000519684 IGKV2-40A0A087WW87 121 aaPredicted RBP6.52□□□□□ -1.37
HMGB4-203ENST00000519684 A0A1B0GXF2 115 aa6.52□□□□□ -1.37
HMGB4-203ENST00000519684 BUB3O43684 328 aa6.52□□□□□ -1.37
HMGB4-203ENST00000519684 NUPR1O60356 82 aa6.52□□□□□ -1.37
HMGB4-203ENST00000519684 IGKV2D-40P01614 121 aaPredicted RBP6.52□□□□□ -1.37
HMGB4-203ENST00000519684 GZMBP10144 247 aa6.52□□□□□ -1.37
HMGB4-203ENST00000519684 SRSF1Q07955 248 aaKnown RBP eCLIP6.52□□□□□ -1.37
HMGB4-203ENST00000519684 SLAQ13239 276 aa6.52□□□□□ -1.37
HMGB4-203ENST00000519684 CDPF1Q6NVV7 123 aa6.52□□□□□ -1.37
HMGB4-203ENST00000519684 GTSF1Q8WW33 167 aa6.52□□□□□ -1.37
HMGB4-203ENST00000519684 USMG5Q96IX5 58 aa6.52□□□□□ -1.37
HMGB4-203ENST00000519684 NDFIP1Q9BT67 221 aa6.52□□□□□ -1.37
HMGB4-203ENST00000519684 TP53TG3Q9ULZ0 132 aa6.52□□□□□ -1.37
HMGB4-203ENST00000519684 DOPEY1Q5JWR5 2465 aa6.52□□□□□ -1.37
HMGB4-203ENST00000519684 IGHV3-66A0A0C4DH42 116 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 BRI3O95415 125 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 TGFAP01135 160 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 AVPP01185 164 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 PRB4P10163 310 aaPredicted RBP6.51□□□□□ -1.37
HMGB4-203ENST00000519684 PF4V1P10720 104 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 PCP4P48539 62 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 IQCJQ1A5X6 159 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 BORCS7Q96B45 105 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 KCNS1Q96KK3 526 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 C8orf49Q96NF6 230 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 ASCL2Q99929 193 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 BEX4Q9NWD9 120 aaPredicted RBP6.51□□□□□ -1.37
HMGB4-203ENST00000519684 CLPSL1A2RUU4 121 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 ZNF207O43670 478 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms