RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 VMO1Q7Z5L0 202 aa3.69□□□□□ -1.82
CTNNA1-212ENST00000518919 SRSF12Q8WXF0 261 aaKnown RBP3.69□□□□□ -1.82
CTNNA1-212ENST00000518919 CACNG8Q8WXS5 425 aa3.69□□□□□ -1.82
CTNNA1-212ENST00000518919 ACY3Q96HD9 319 aa3.69□□□□□ -1.82
CTNNA1-212ENST00000518919 FAM167A-AS1Q96KT0 104 aa3.69□□□□□ -1.82
CTNNA1-212ENST00000518919 DERL1Q9BUN8 251 aa3.69□□□□□ -1.82
CTNNA1-212ENST00000518919 SLC25A2Q9BXI2 301 aa3.69□□□□□ -1.82
CTNNA1-212ENST00000518919 SAV1Q9H4B6 383 aaPredicted RBP3.69□□□□□ -1.82
CTNNA1-212ENST00000518919 METTL1Q9UBP6 276 aaKnown RBP3.69□□□□□ -1.82
CTNNA1-212ENST00000518919 INSIG2Q9Y5U4 225 aa3.69□□□□□ -1.82
CTNNA1-212ENST00000518919 URGCP-MRPS24S4R325 110 aa3.69□□□□□ -1.82
CTNNA1-212ENST00000518919 PLXNB1O43157 2135 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 SPTAN1Q13813 2472 aaKnown RBP3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 COL12A1Q99715 3063 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 ARHGAP32A7KAX9 2087 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 ABCA2Q9BZC7 2435 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 IGHV3-21A0A0B4J1V1 117 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 TRAV5A0A0B4J249 113 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 TCRBV4S1A1TA0A5B7 111 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 C1orf196B1AJZ1 125 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 GGTLC3B5MD39 225 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 PHOX2AO14813 284 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 NBR2O15453 112 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 PDE6DO43924 150 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 APELAP0DMC3 54 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 HNF1AP20823 631 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 HTR1DP28221 377 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 EFNA4P52798 201 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 LMO4P61968 165 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 LCN2P80188 198 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 ZNF90Q03938 601 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 MMDQ15546 238 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 TMEM241Q24JQ0 296 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 FAM78BQ5VT40 261 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 PATE2Q6UY27 113 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 LINC01551Q86U37 167 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 Q8N6K4 173 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 NPBQ8NG41 125 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 OR1B1Q8NGR6 318 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 OR1P1Q8NH06 330 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 NANPQ8TBE9 248 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 TBX15Q96SF7 602 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 RNF5Q99942 180 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 MRPL32Q9BYC8 188 aaKnown RBP3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 BPESC1Q9GZL8 116 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 ESM1Q9NQ30 184 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 BIN3Q9NQY0 253 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 DOK5Q9P104 306 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 DPM3Q9P2X0 92 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 HILPDAQ9Y5L2 63 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 F11RQ9Y624 299 aaKnown RBP3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 ARL2-SNX15V9GYD0 113 aa3.68□□□□□ -1.82
CTNNA1-212ENST00000518919 MED13LQ71F56 2210 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 FLNCQ14315 2725 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 TRBV24-1A0A075B6N3 115 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 A0A087X002 238 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 H7BYZ3 331 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 CLDN34H7C241 214 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 I3L2K1 104 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 K7EIM0 57 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 K7EN84 100 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 COX7A2P2O60397 106 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 MT-CO2P00403 227 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 AMBPP02760 352 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 PFN1P07737 140 aaKnown RBP3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 IGLC1P0CG04 106 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 C8orf88P0DMB2 117 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 CD24P25063 80 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 SUB1P53999 127 aaKnown RBP eCLIP3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 UBE2L3P68036 154 aaKnown RBP3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 C5orf64Q2M2E5 130 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 MINOS1Q5TGZ0 78 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 C18orf65Q6ZTR6 163 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 NOTCH2NLQ7Z3S9 236 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 PPP1R27Q86WC6 154 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 NECAP1Q8NC96 275 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 FAM210BQ96KR6 192 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 TRGV9Q99603 122 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 TXNDC17Q9BRA2 123 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 PYGO2Q9BRQ0 406 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 TMEM167BQ9NRX6 74 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 ZNF355PQ9NSJ1 428 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 TMEM242Q9NWH2 141 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 MINOS1-NBL1R4GNA1 71 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 ZNF462Q96JM2 2506 aa3.67□□□□□ -1.82
CTNNA1-212ENST00000518919 IGHV4-30-2A0A087WSY4 118 aa3.66□□□□□ -1.82
CTNNA1-212ENST00000518919 IFITM10A6NMD0 228 aa3.66□□□□□ -1.82
CTNNA1-212ENST00000518919 OOSP1A8MZH6 123 aa3.66□□□□□ -1.82
CTNNA1-212ENST00000518919 C9JCJ5 164 aa3.66□□□□□ -1.82
CTNNA1-212ENST00000518919 K7EQG2 157 aa3.66□□□□□ -1.82
CTNNA1-212ENST00000518919 OR7C2O60412 319 aa3.66□□□□□ -1.82
CTNNA1-212ENST00000518919 GGCTO75223 188 aaKnown RBP3.66□□□□□ -1.82
CTNNA1-212ENST00000518919 IGKV1-17P01599 117 aa3.66□□□□□ -1.82
CTNNA1-212ENST00000518919 OR10J4P0C629 311 aa3.66□□□□□ -1.82
CTNNA1-212ENST00000518919 PYYP10082 97 aa3.66□□□□□ -1.82
CTNNA1-212ENST00000518919 CEACAM3P40198 252 aa3.66□□□□□ -1.82
CTNNA1-212ENST00000518919 RPL35P42766 123 aaKnown RBP3.66□□□□□ -1.82
CTNNA1-212ENST00000518919 RPS10P46783 165 aaKnown RBP3.66□□□□□ -1.82
CTNNA1-212ENST00000518919 GALR1P47211 349 aa3.66□□□□□ -1.82
CTNNA1-212ENST00000518919 NDUFV3P56181 108 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms