RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 FAM231BA6NCW3 169 aa6.64□□□□□ -1.35
CTNNA1-210ENST00000518825 FAM90A27PA6NNH2 459 aa6.64□□□□□ -1.35
CTNNA1-210ENST00000518825 NDUFA3O95167 84 aa6.64□□□□□ -1.35
CTNNA1-210ENST00000518825 SAPCD1Q5SSQ6 148 aa6.64□□□□□ -1.35
CTNNA1-210ENST00000518825 COL5A1-AS1Q5SY13 56 aa6.64□□□□□ -1.35
CTNNA1-210ENST00000518825 OR11H6Q8NGC7 330 aa6.64□□□□□ -1.35
CTNNA1-210ENST00000518825 C8orf49Q96NF6 230 aa6.64□□□□□ -1.35
CTNNA1-210ENST00000518825 TXN2Q99757 166 aa6.64□□□□□ -1.35
CTNNA1-210ENST00000518825 COL12A1Q99715 3063 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 CNIH1O95406 144 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 PLGLAQ15195 96 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 NPBQ8NG41 125 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 RNF5Q99942 180 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 SOX21Q9Y651 276 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 A0A1W2PRD5 423 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 A0A1W2PRF3 423 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 A0A1W2PRM7 423 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 ODF3BA8MYP8 253 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 IL4P05112 153 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 LINC00614P0C842 121 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 HNRNPA3P51991 378 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 FOXE3Q13461 319 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 TMEM75Q8N9X5 138 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 RNF125Q96EQ8 232 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 PSMG3-AS1Q96PY0 264 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 TMEM70Q9BUB7 260 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 ZFP30Q9Y2G7 519 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 SYS1-DBNDD2H3BUS1 97 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 NBR2O15453 112 aa6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 HINT1P49773 126 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 NEU4Q8WWR8 484 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 DAZAP1Q96EP5 407 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-210ENST00000518825 hDV102S1A0JD36 115 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 HLA-DRB1P01911 266 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 LIPFP07098 398 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 FAM106CPP0CH98 169 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 FCGR2BP31994 310 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 PSG3Q16557 428 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 FAM106AQ4KMX7 169 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 CHCHD1Q96BP2 118 aaKnown RBP6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 SRSF8Q9BRL6 282 aaKnown RBP6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 SCNM1Q9BWG6 230 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 C1RLQ9NZP8 487 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 PSG8Q9UQ74 426 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 MRPS16Q9Y3D3 137 aaKnown RBP6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 ITPR1Q14643 2758 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 IGLV11-55A0A075B6I3 123 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 HTR1DP28221 377 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 FOXC1Q12948 553 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 FBXL19-AS1Q494R0 122 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 BPIFA4PQ86YQ2 179 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 DPM3Q9P2X0 92 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 OR4C46A6NHA9 309 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 TCF21O43680 179 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 IGHV3-23P01764 117 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 IGHG4P01861 327 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 EGR2P11161 476 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 KLHDC1Q8N7A1 406 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 GATD1Q8NB37 220 aa6.62□□□□□ -1.35
CTNNA1-210ENST00000518825 ADORA2A-AS1P86434 159 aa6.61□□□□□ -1.35
CTNNA1-210ENST00000518825 UNQ5815/PRO19632Q6UWF5 114 aa6.61□□□□□ -1.35
CTNNA1-210ENST00000518825 MED13LQ71F56 2210 aa6.61□□□□□ -1.35
CTNNA1-210ENST00000518825 A0A096LNJ9 63 aa6.61□□□□□ -1.35
CTNNA1-210ENST00000518825 LEPROTL1O95214 131 aa6.61□□□□□ -1.35
CTNNA1-210ENST00000518825 LOXL1Q08397 574 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-210ENST00000518825 C5orf64Q2M2E5 130 aa6.61□□□□□ -1.35
CTNNA1-210ENST00000518825 C11orf71Q6IPW1 123 aa6.61□□□□□ -1.35
CTNNA1-210ENST00000518825 PIP4P2Q8N4L2 257 aa6.61□□□□□ -1.35
CTNNA1-210ENST00000518825 SMAD5-AS1Q9Y6J3 95 aa6.61□□□□□ -1.35
CTNNA1-210ENST00000518825 A0A1B0GUT8 65 aa6.6□□□□□ -1.35
CTNNA1-210ENST00000518825 A0A1W2PPR1 153 aa6.6□□□□□ -1.35
CTNNA1-210ENST00000518825 CHEK1O14757 476 aa6.6□□□□□ -1.35
CTNNA1-210ENST00000518825 CSN3P07498 182 aa6.6□□□□□ -1.35
CTNNA1-210ENST00000518825 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-210ENST00000518825 NCR2O95944 276 aa6.6□□□□□ -1.35
CTNNA1-210ENST00000518825 ZFP36P26651 326 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-210ENST00000518825 IGFL4Q6B9Z1 124 aa6.6□□□□□ -1.35
CTNNA1-210ENST00000518825 LYPD1Q8N2G4 141 aa6.6□□□□□ -1.35
CTNNA1-210ENST00000518825 Q8N6K4 173 aa6.6□□□□□ -1.35
CTNNA1-210ENST00000518825 PMCHL2Q9BQD1 86 aa6.6□□□□□ -1.35
CTNNA1-210ENST00000518825 CSMD2Q7Z408 3487 aa6.6□□□□□ -1.35
CTNNA1-210ENST00000518825 CCL25O15444 150 aa6.6□□□□□ -1.35
CTNNA1-210ENST00000518825 TMEM213A2RRL7 107 aa6.59□□□□□ -1.35
CTNNA1-210ENST00000518825 NPIPB5A8MRT5 1133 aa6.59□□□□□ -1.35
CTNNA1-210ENST00000518825 PRTN3P24158 256 aa6.59□□□□□ -1.35
CTNNA1-210ENST00000518825 ZNF80P51504 273 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-210ENST00000518825 AJUBAQ96IF1 538 aa6.59□□□□□ -1.35
CTNNA1-210ENST00000518825 IGKV2-40A0A087WW87 121 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-210ENST00000518825 MUC21A0A0G2JKD1 596 aa6.59□□□□□ -1.35
CTNNA1-210ENST00000518825 MUC21A0A140T8X8 626 aa6.59□□□□□ -1.35
CTNNA1-210ENST00000518825 C20orf202A1L168 122 aa6.59□□□□□ -1.35
CTNNA1-210ENST00000518825 IGKV2D-40P01614 121 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-210ENST00000518825 CTSGP08311 255 aa6.59□□□□□ -1.35
CTNNA1-210ENST00000518825 HLA-DMBP28068 263 aa6.59□□□□□ -1.35
CTNNA1-210ENST00000518825 MUC21Q5SSG8 566 aa6.59□□□□□ -1.35
CTNNA1-210ENST00000518825 ZNF562Q6V9R5 426 aa6.59□□□□□ -1.35
CTNNA1-210ENST00000518825 TTC9CQ8N5M4 171 aa6.59□□□□□ -1.35
CTNNA1-210ENST00000518825 IGHV3OR16-8A0A075B7F1 116 aa6.59□□□□□ -1.36
CTNNA1-210ENST00000518825 TMEM238LA0A1B0GVL6 79 aa6.59□□□□□ -1.36
CTNNA1-210ENST00000518825 CCL21O00585 134 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms