RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 VBP1P61758 197 aa8.42□□□□□ -1.06
TRAPPC9-204ENST00000518723 TMPRSS5Q9H3S3 457 aa8.42□□□□□ -1.06
TRAPPC9-204ENST00000518723 SNURFLB1AK76 121 aa8.41□□□□□ -1.06
TRAPPC9-204ENST00000518723 NXPH4O95158 308 aa8.41□□□□□ -1.06
TRAPPC9-204ENST00000518723 IAPPP10997 89 aa8.41□□□□□ -1.06
TRAPPC9-204ENST00000518723 SRPXP78539 464 aa8.41□□□□□ -1.06
TRAPPC9-204ENST00000518723 MRPS10P82664 201 aaKnown RBP8.41□□□□□ -1.06
TRAPPC9-204ENST00000518723 DAZ2Q13117 558 aaKnown RBP8.41□□□□□ -1.06
TRAPPC9-204ENST00000518723 AP3S1Q92572 193 aa8.41□□□□□ -1.06
TRAPPC9-204ENST00000518723 RPUSD4Q96CM3 377 aaKnown RBP8.41□□□□□ -1.06
TRAPPC9-204ENST00000518723 PRRT1Q99946 306 aa8.41□□□□□ -1.06
TRAPPC9-204ENST00000518723 VCX3AQ9NNX9 186 aa8.41□□□□□ -1.06
TRAPPC9-204ENST00000518723 PIGBOS1A0A0B4J2F0 54 aa8.4□□□□□ -1.06
TRAPPC9-204ENST00000518723 AKAIN1P0CW23 69 aa8.4□□□□□ -1.06
TRAPPC9-204ENST00000518723 GCSHP23434 173 aa8.4□□□□□ -1.06
TRAPPC9-204ENST00000518723 KIR3DS1Q14943 382 aa8.4□□□□□ -1.06
TRAPPC9-204ENST00000518723 GFI1BQ5VTD9 330 aa8.4□□□□□ -1.06
TRAPPC9-204ENST00000518723 FUNDC2Q9BWH2 189 aa8.4□□□□□ -1.06
TRAPPC9-204ENST00000518723 PAIP2BQ9ULR5 123 aaKnown RBP8.4□□□□□ -1.06
TRAPPC9-204ENST00000518723 HIGD1AQ9Y241 93 aa8.4□□□□□ -1.06
TRAPPC9-204ENST00000518723 TNFRSF18Q9Y5U5 241 aa8.4□□□□□ -1.06
TRAPPC9-204ENST00000518723 A0A087WXM4 84 aa8.39□□□□□ -1.07
TRAPPC9-204ENST00000518723 DUXBA0A1W2PPF3 345 aa8.39□□□□□ -1.07
TRAPPC9-204ENST00000518723 CXCL2P19875 107 aa8.39□□□□□ -1.07
TRAPPC9-204ENST00000518723 PLP1P60201 277 aa8.39□□□□□ -1.07
TRAPPC9-204ENST00000518723 RAP2BP61225 183 aa8.39□□□□□ -1.07
TRAPPC9-204ENST00000518723 RPP30P78346 268 aaKnown RBP8.39□□□□□ -1.07
TRAPPC9-204ENST00000518723 Q6ZTI0 123 aa8.39□□□□□ -1.07
TRAPPC9-204ENST00000518723 ACOT7LQ6ZUV0 252 aa8.39□□□□□ -1.07
TRAPPC9-204ENST00000518723 TMED4Q7Z7H5 227 aa8.39□□□□□ -1.07
TRAPPC9-204ENST00000518723 OR51S1Q8NGJ8 323 aa8.39□□□□□ -1.07
TRAPPC9-204ENST00000518723 LRRC20Q8TCA0 184 aa8.39□□□□□ -1.07
TRAPPC9-204ENST00000518723 SMIM4Q8WVI0 70 aa8.39□□□□□ -1.07
TRAPPC9-204ENST00000518723 SCGB3A2Q96PL1 93 aa8.39□□□□□ -1.07
TRAPPC9-204ENST00000518723 CIB3Q96Q77 187 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC9-204ENST00000518723 TMEM70Q9BUB7 260 aa8.39□□□□□ -1.07
TRAPPC9-204ENST00000518723 HYPMO75409 117 aa8.38□□□□□ -1.07
TRAPPC9-204ENST00000518723 MED6O75586 246 aa8.38□□□□□ -1.07
TRAPPC9-204ENST00000518723 ATP6V1G2O95670 118 aa8.38□□□□□ -1.07
TRAPPC9-204ENST00000518723 SLC25A6P12236 298 aa8.38□□□□□ -1.07
TRAPPC9-204ENST00000518723 ANXA3P12429 323 aa8.38□□□□□ -1.07
TRAPPC9-204ENST00000518723 AKR1C1Q04828 323 aa8.38□□□□□ -1.07
TRAPPC9-204ENST00000518723 CYP2G1PQ6ZSU1 146 aa8.38□□□□□ -1.07
TRAPPC9-204ENST00000518723 S100A7AQ86SG5 101 aa8.38□□□□□ -1.07
TRAPPC9-204ENST00000518723 DNAH8Q96JB1 4490 aa8.37□□□□□ -1.07
TRAPPC9-204ENST00000518723 TRGV2A0A075B6R0 118 aa8.37□□□□□ -1.07
TRAPPC9-204ENST00000518723 TRAV9-2A0A087WT02 112 aa8.37□□□□□ -1.07
TRAPPC9-204ENST00000518723 KRTAP29-1A8MX34 341 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC9-204ENST00000518723 K7EP13 123 aa8.37□□□□□ -1.07
TRAPPC9-204ENST00000518723 MRPS12O15235 138 aaKnown RBP8.37□□□□□ -1.07
TRAPPC9-204ENST00000518723 IL5P05113 134 aa8.37□□□□□ -1.07
TRAPPC9-204ENST00000518723 PRB4P10163 310 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC9-204ENST00000518723 CLVS1Q8IUQ0 354 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC9-204ENST00000518723 PYGO2Q9BRQ0 406 aa8.37□□□□□ -1.07
TRAPPC9-204ENST00000518723 SLC50A1Q9BRV3 221 aa8.37□□□□□ -1.07
TRAPPC9-204ENST00000518723 PARD6GQ9BYG4 376 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC9-204ENST00000518723 ZNF331Q9NQX6 463 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC9-204ENST00000518723 SCP2D1Q9UJQ7 156 aa8.37□□□□□ -1.07
TRAPPC9-204ENST00000518723 RNF24Q9Y225 148 aa8.37□□□□□ -1.07
TRAPPC9-204ENST00000518723 ICOSQ9Y6W8 199 aa8.37□□□□□ -1.07
TRAPPC9-204ENST00000518723 PMS2P5A8MQ11 134 aa8.36□□□□□ -1.07
TRAPPC9-204ENST00000518723 CTDSPLO15194 276 aa8.36□□□□□ -1.07
TRAPPC9-204ENST00000518723 SYNGR2O43760 224 aa8.36□□□□□ -1.07
TRAPPC9-204ENST00000518723 LINC00869P0C866 280 aa8.36□□□□□ -1.07
TRAPPC9-204ENST00000518723 SELENOTP62341 195 aa8.36□□□□□ -1.07
TRAPPC9-204ENST00000518723 HAMPP81172 84 aa8.36□□□□□ -1.07
TRAPPC9-204ENST00000518723 C4orf46Q504U0 113 aa8.36□□□□□ -1.07
TRAPPC9-204ENST00000518723 LCN15Q6UWW0 184 aa8.36□□□□□ -1.07
TRAPPC9-204ENST00000518723 ODF3Q96PU9 254 aa8.36□□□□□ -1.07
TRAPPC9-204ENST00000518723 LINC00467Q9BRT7 94 aa8.36□□□□□ -1.07
TRAPPC9-204ENST00000518723 MIXL1Q9H2W2 232 aa8.36□□□□□ -1.07
TRAPPC9-204ENST00000518723 MSRB1Q9NZV6 116 aa8.36□□□□□ -1.07
TRAPPC9-204ENST00000518723 ANKRD20A5PA0PJZ0 165 aa8.35□□□□□ -1.07
TRAPPC9-204ENST00000518723 WRBO00258 174 aa8.35□□□□□ -1.07
TRAPPC9-204ENST00000518723 PAX4O43316 350 aa8.35□□□□□ -1.07
TRAPPC9-204ENST00000518723 ZNF324O75467 553 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC9-204ENST00000518723 OR5G3P0C626 314 aa8.35□□□□□ -1.07
TRAPPC9-204ENST00000518723 SPANXN5Q5MJ07 72 aa8.35□□□□□ -1.07
TRAPPC9-204ENST00000518723 SERTAD4-AS1Q5TG53 156 aa8.35□□□□□ -1.07
TRAPPC9-204ENST00000518723 CCDC190Q86UF4 302 aa8.35□□□□□ -1.07
TRAPPC9-204ENST00000518723 LRTM2Q8N967 370 aa8.35□□□□□ -1.07
TRAPPC9-204ENST00000518723 C11orf72Q8NBR9 251 aa8.35□□□□□ -1.07
TRAPPC9-204ENST00000518723 ZNF680Q8NEM1 530 aa8.35□□□□□ -1.07
TRAPPC9-204ENST00000518723 FUT9Q9Y231 359 aa8.35□□□□□ -1.07
TRAPPC9-204ENST00000518723 LY96Q9Y6Y9 160 aa8.35□□□□□ -1.07
TRAPPC9-204ENST00000518723 TRAV12-3A0A0B4J271 114 aa8.34□□□□□ -1.07
TRAPPC9-204ENST00000518723 PRAC2D3DTV9 90 aa8.34□□□□□ -1.07
TRAPPC9-204ENST00000518723 ANXA7P20073 488 aaKnown RBP8.34□□□□□ -1.07
TRAPPC9-204ENST00000518723 LEPP41159 167 aa8.34□□□□□ -1.07
TRAPPC9-204ENST00000518723 LYPD5Q6UWN5 251 aa8.34□□□□□ -1.07
TRAPPC9-204ENST00000518723 PATE2Q6UY27 113 aa8.34□□□□□ -1.07
TRAPPC9-204ENST00000518723 ZNF431Q8TF32 576 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC9-204ENST00000518723 NTN5Q8WTR8 489 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC9-204ENST00000518723 GSN-AS1Q9NRJ2 163 aa8.34□□□□□ -1.07
TRAPPC9-204ENST00000518723 STRAPQ9Y3F4 350 aaKnown RBP8.34□□□□□ -1.07
TRAPPC9-204ENST00000518723 TRGV1A0A0A0MS02 117 aa8.33□□□□□ -1.08
TRAPPC9-204ENST00000518723 NPIPB6E9PJ23 425 aa8.33□□□□□ -1.08
TRAPPC9-204ENST00000518723 H3BP45 60 aa8.33□□□□□ -1.08
TRAPPC9-204ENST00000518723 K7EPK0 472 aa8.33□□□□□ -1.08
TRAPPC9-204ENST00000518723 CT45A10P0DMU9 189 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms