RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 CD300EQ496F6 205 aaPredicted RBP8.6□□□□□ -1.03
ARFGEF1-202ENST00000517955 FAM74A1Q5RGS3 127 aa8.6□□□□□ -1.03
ARFGEF1-202ENST00000517955 FXYD5Q96DB9 178 aa8.6□□□□□ -1.03
ARFGEF1-202ENST00000517955 NRN1Q9NPD7 142 aa8.6□□□□□ -1.03
ARFGEF1-202ENST00000517955 TMEM167BQ9NRX6 74 aa8.6□□□□□ -1.03
ARFGEF1-202ENST00000517955 CMYA5Q8N3K9 4069 aa8.6□□□□□ -1.03
ARFGEF1-202ENST00000517955 MAP1LC3B2A6NCE7 125 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 TEX46H3BTG2 121 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 RGS13O14921 159 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 OR7C2O60412 319 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 HBE1P02100 147 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 NBEAP1P0C6P0 100 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 ARL14EPLP0DKL9 152 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 PSMB3P49720 205 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 PAFAH1B2P68402 229 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 LCN12Q6JVE5 192 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 RBPMS2Q6ZRY4 209 aaKnown RBP8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 TMEM61Q8N0U2 210 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 LYPD1Q8N2G4 141 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 DCANP1Q8TF63 244 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 SFT2D1Q8WV19 159 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 SPAG8Q99932 426 aaPredicted RBP8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 MAP1LC3BQ9GZQ8 125 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 CLEC5AQ9NY25 188 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 ARL2-SNX15V9GYD0 113 aa8.59□□□□□ -1.03
ARFGEF1-202ENST00000517955 MGAM2Q2M2H8 2515 aa8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 TRBV19A0A075B6N1 114 aa8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 ZNF785A8K8V0 405 aa8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 H3BQ15 152 aa8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 K7EQG2 157 aa8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 SOCS3O14543 225 aa8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 PYYP10082 97 aa8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 IGLL1P15814 213 aa8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 ATF4P18848 351 aaPredicted RBP8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 GCHFRP30047 84 aa8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 PPT1P50897 306 aa8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 BEAN1Q3B7T3 259 aa8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 LCN15Q6UWW0 184 aa8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 FAM110AQ9BQ89 295 aa8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 MRPL18Q9H0U6 180 aaKnown RBP8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 MS4A6AQ9H2W1 248 aa8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 ZNF586Q9NXT0 402 aa8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 ZMAT5Q9UDW3 170 aaKnown RBP8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 ZNF256Q9Y2P7 627 aaPredicted RBP8.58□□□□□ -1.04
ARFGEF1-202ENST00000517955 IZUMO1RA6ND01 250 aa8.57□□□□□ -1.04
ARFGEF1-202ENST00000517955 ISLRO14498 428 aa8.57□□□□□ -1.04
ARFGEF1-202ENST00000517955 HMGB3O15347 200 aaKnown RBP8.57□□□□□ -1.04
ARFGEF1-202ENST00000517955 NDUFB4O95168 129 aa8.57□□□□□ -1.04
ARFGEF1-202ENST00000517955 NMBP08949 121 aa8.57□□□□□ -1.04
ARFGEF1-202ENST00000517955 UBE2L3P68036 154 aaKnown RBP8.57□□□□□ -1.04
ARFGEF1-202ENST00000517955 EGFEM1PQ0D2K5 195 aa8.57□□□□□ -1.04
ARFGEF1-202ENST00000517955 ARL6IP6Q8N6S5 226 aa8.57□□□□□ -1.04
ARFGEF1-202ENST00000517955 SLC50A1Q9BRV3 221 aa8.57□□□□□ -1.04
ARFGEF1-202ENST00000517955 ZNF331Q9NQX6 463 aaPredicted RBP8.57□□□□□ -1.04
ARFGEF1-202ENST00000517955 A0A1W2PRE2 83 aa8.56□□□□□ -1.04
ARFGEF1-202ENST00000517955 OR4C46A6NHA9 309 aa8.56□□□□□ -1.04
ARFGEF1-202ENST00000517955 EIF3GO75821 320 aaKnown RBP eCLIP8.56□□□□□ -1.04
ARFGEF1-202ENST00000517955 OR10J4P0C629 311 aa8.56□□□□□ -1.04
ARFGEF1-202ENST00000517955 CMC4P56277 68 aaPredicted RBP8.56□□□□□ -1.04
ARFGEF1-202ENST00000517955 RPL11P62913 178 aaKnown RBP8.56□□□□□ -1.04
ARFGEF1-202ENST00000517955 PSG9Q00887 426 aa8.56□□□□□ -1.04
ARFGEF1-202ENST00000517955 NKX6-2Q9C056 277 aaPredicted RBP8.56□□□□□ -1.04
ARFGEF1-202ENST00000517955 TRAV8-2A0A0B4J237 113 aa8.55□□□□□ -1.04
ARFGEF1-202ENST00000517955 DNASE2O00115 360 aaPredicted RBP8.55□□□□□ -1.04
ARFGEF1-202ENST00000517955 NDUFS6O75380 124 aaKnown RBP8.55□□□□□ -1.04
ARFGEF1-202ENST00000517955 TAGLN2P37802 199 aaKnown RBP8.55□□□□□ -1.04
ARFGEF1-202ENST00000517955 ID1P41134 155 aa8.55□□□□□ -1.04
ARFGEF1-202ENST00000517955 FGF8P55075 233 aaPredicted RBP8.55□□□□□ -1.04
ARFGEF1-202ENST00000517955 RAB14P61106 215 aa8.55□□□□□ -1.04
ARFGEF1-202ENST00000517955 CLLU1Q5K131 121 aa8.55□□□□□ -1.04
ARFGEF1-202ENST00000517955 MRPL53Q96EL3 112 aaKnown RBP8.55□□□□□ -1.04
ARFGEF1-202ENST00000517955 TMPRSS5Q9H3S3 457 aa8.55□□□□□ -1.04
ARFGEF1-202ENST00000517955 PRELID1Q9Y255 219 aa8.55□□□□□ -1.04
ARFGEF1-202ENST00000517955 SLC17A3O00476 420 aa8.54□□□□□ -1.04
ARFGEF1-202ENST00000517955 SNRPD3P62318 126 aaKnown RBP8.54□□□□□ -1.04
ARFGEF1-202ENST00000517955 CCL20P78556 96 aa8.54□□□□□ -1.04
ARFGEF1-202ENST00000517955 KPRPQ5T749 579 aaPredicted RBP8.54□□□□□ -1.04
ARFGEF1-202ENST00000517955 C16orf92Q96LL3 132 aa8.54□□□□□ -1.04
ARFGEF1-202ENST00000517955 TXNDC17Q9BRA2 123 aa8.54□□□□□ -1.04
ARFGEF1-202ENST00000517955 MANBALQ9NQG1 85 aa8.54□□□□□ -1.04
ARFGEF1-202ENST00000517955 OTORQ9NRC9 128 aa8.54□□□□□ -1.04
ARFGEF1-202ENST00000517955 NBEAL1Q6ZS30 2694 aa8.54□□□□□ -1.04
ARFGEF1-202ENST00000517955 FAM74A7A6NL05 159 aa8.53□□□□□ -1.04
ARFGEF1-202ENST00000517955 PSG3Q16557 428 aa8.53□□□□□ -1.04
ARFGEF1-202ENST00000517955 CCDC28AQ8IWP9 274 aa8.53□□□□□ -1.04
ARFGEF1-202ENST00000517955 GBGT1Q8N5D6 347 aa8.53□□□□□ -1.04
ARFGEF1-202ENST00000517955 BLNKQ8WV28 456 aa8.53□□□□□ -1.04
ARFGEF1-202ENST00000517955 TCEAL7Q9BRU2 100 aa8.53□□□□□ -1.04
ARFGEF1-202ENST00000517955 Q9H3A6 140 aa8.53□□□□□ -1.04
ARFGEF1-202ENST00000517955 AAMDCQ9H7C9 122 aa8.53□□□□□ -1.04
ARFGEF1-202ENST00000517955 IGKV3-7A0A075B6H7 116 aa8.52□□□□□ -1.05
ARFGEF1-202ENST00000517955 RANP62826 216 aaKnown RBP8.52□□□□□ -1.05
ARFGEF1-202ENST00000517955 GUCA2BQ16661 112 aa8.52□□□□□ -1.05
ARFGEF1-202ENST00000517955 RXFP4Q8TDU9 374 aa8.52□□□□□ -1.05
ARFGEF1-202ENST00000517955 C19orf73Q9NVV2 129 aa8.52□□□□□ -1.05
ARFGEF1-202ENST00000517955 MED9Q9NWA0 146 aa8.52□□□□□ -1.05
ARFGEF1-202ENST00000517955 SELENOKQ9Y6D0 94 aa8.52□□□□□ -1.05
ARFGEF1-202ENST00000517955 NOTCH1P46531 2555 aa8.51□□□□□ -1.05
ARFGEF1-202ENST00000517955 H3BTX0 84 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms