RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 LINC00271P0C7V0 271 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 P0DMU3 169 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 FAM231AP0DMU4 169 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 FAM231CP0DMU5 169 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 FKBP2P26885 142 aaKnown RBP3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 FCER1GP30273 86 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 TFF3Q07654 80 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 FHL3Q13643 280 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 FAM53BQ14153 422 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 EBI3Q14213 229 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 DEFB121Q5J5C9 76 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 ZNF493Q6ZR52 646 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 AAED1Q7RTV5 226 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 RPS19BP1Q86WX3 136 aaKnown RBP3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 PCP2Q8IVA1 136 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 TMEM86BQ8N661 226 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 Q8NA96 180 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 TMEM116Q8NCL8 245 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 RNF138Q8WVD3 245 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 SPTSSAQ969W0 71 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 UBE2WQ96B02 151 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 CYYR1Q96J86 154 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 SPACA5Q96QH8 159 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 NXT2Q9NPJ8 142 aaKnown RBP3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 AMMECR1Q9Y4X0 333 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 EML5Q05BV3 1969 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 EXPH5Q8NEV8 1989 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 TRBV7-3A0A075B6L6 115 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 SMIM26A0A096LP01 95 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 TRAV17A0A0B4J275 112 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 TRBV10-2A0A0K0K1G8 114 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 FAM236AA0A1B0GUQ0 79 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 FAM236BA0A1B0GV22 79 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 A0A1W2PQD3 144 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 RBAKDNA6NC62 111 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 H7C1H1 209 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 NXPH3O95157 252 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 IGLV3-1P01715 115 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 PRSS1P07477 247 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 RPL35AP18077 110 aaKnown RBP3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 PRDX2P32119 198 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 PFN2P35080 140 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 UBE2D1P51668 147 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 NXPH1P58417 271 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 SRSF9Q13242 221 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 ZNF56Q15929 161 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 GDF5OSQ5U4N7 250 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 C22orf39Q6P5X5 142 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 HRCT1Q6UXD1 115 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 IL17RELQ6ZVW7 336 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 ORMDL3Q8N138 153 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 SCAMP4Q969E2 229 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 FMC1Q96HJ9 113 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 ZNF488Q96MN9 340 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 ODF3Q96PU9 254 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 VKORC1Q9BQB6 163 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 RTL8AQ9BWD3 113 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 SCNM1Q9BWG6 230 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 PRSS22Q9GZN4 317 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 TP73-AS1Q9UF72 201 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 SERP1Q9Y6X1 66 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 THADAQ6YHU6 1953 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 KIAA1549Q9HCM3 1950 aa3.8□□□□□ -1.8
HMGB1P19-201ENST00000517578 LTBP1Q14766 1721 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 A0A0J9YW62 118 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 LINC01546A6NGU7 62 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 J3QQQ9 107 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 PEX7O00628 323 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 SPRY1O43609 319 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 WISP2O76076 250 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 IGKV1-5P01602 117 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 KRTAP10-11P60412 298 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 NPC2P61916 151 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 CD164Q04900 197 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 C4orf26Q17RF5 130 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 TMEM155Q4W5P6 130 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 PAPPA-AS1Q5QFB9 102 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 Q6ZT83 130 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 FAM90A1Q86YD7 464 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 MKXQ8IYA7 352 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 SERP2Q8N6R1 65 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 POM121L12Q8N7R1 296 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 RFESDQ8TAC1 157 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 LINC00477Q96M19 166 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 PLA2G2FQ9BZM2 168 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 PRO1854Q9UHT4 67 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 HHLA3Q9XRX5 114 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 PYGO1Q9Y3Y4 419 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 U3KQK5 164 aa3.79□□□□□ -1.8
HMGB1P19-201ENST00000517578 TNS1Q9HBL0 1735 aaKnown RBP3.78□□□□□ -1.8
HMGB1P19-201ENST00000517578 GOLGA4Q13439 2230 aaKnown RBP3.78□□□□□ -1.8
HMGB1P19-201ENST00000517578 CACNA1CQ13936 2221 aa3.78□□□□□ -1.8
HMGB1P19-201ENST00000517578 A0A0G2JRQ6 117 aa3.78□□□□□ -1.8
HMGB1P19-201ENST00000517578 TRBV6-1A0A0K0K1D8 114 aa3.78□□□□□ -1.8
HMGB1P19-201ENST00000517578 F5H697 171 aa3.78□□□□□ -1.8
HMGB1P19-201ENST00000517578 K7EM74 188 aa3.78□□□□□ -1.8
HMGB1P19-201ENST00000517578 LTAP01374 205 aa3.78□□□□□ -1.8
HMGB1P19-201ENST00000517578 B4GALT1P15291 398 aa3.78□□□□□ -1.8
HMGB1P19-201ENST00000517578 CA6P23280 308 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms