RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 OR52A5Q9H2C5 316 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 MRPS7Q9Y2R9 242 aaKnown RBP-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 ARL5AQ9Y689 179 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 KDM3BQ7LBC6 1761 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 CDK12Q9NYV4 1490 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 AKAP11Q9UKA4 1901 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 ZNF142P52746 1687 aaPredicted RBP-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 BICDL2A1A5D9 508 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 hCG_2039718K7EN88 272 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 DEGS1O15121 323 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 NEMFO60524 1076 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 IVLP07476 585 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 OR10J4P0C629 311 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HMOX2P30519 316 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 RAB5CP51148 216 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 PSMD7P51665 324 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 YBEYP58557 167 aaPredicted RBP-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 UBE2D3P61077 147 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 VSNL1P62760 191 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 UBE2D2P62837 147 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 ATP6V1FQ16864 119 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 Q5VV11 94 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 DUPD1Q68J44 220 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HBMQ6B0K9 141 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 SPOPLQ6IQ16 392 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 SLC48A1Q6P1K1 146 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HDDC3Q8N4P3 179 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 TRAM1L1Q8N609 369 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 TMEM161BQ8NDZ6 487 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 ISOC2Q96AB3 205 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 ZHX1-C8orf76Q96EF9 292 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 CARD19Q96LW7 228 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HYLS1Q96M11 299 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 FAM210AQ96ND0 272 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 GSDMAQ96QA5 445 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HIST1H2BLQ99880 126 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 BCL7BQ9BQE9 202 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 ZC4H2Q9NQZ6 224 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 TAS2R13Q9NYV9 303 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 ARHGEF28Q8N1W1 1705 aaKnown RBP-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 CHD2O14647 1828 aaKnown RBP-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 SBF2Q86WG5 1849 aa-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 PCF11O94913 1555 aaKnown RBP-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 MED1Q15648 1581 aaPredicted RBP-2.15□□□□□ -2.75
RNU6-1238P-201ENST00000517215 SMG6Q86US8 1419 aaKnown RBP-2.16□□□□□ -2.75
RNU6-1238P-201ENST00000517215 RIMBP3CA6NJZ7 1639 aa-2.16□□□□□ -2.75
RNU6-1238P-201ENST00000517215 RIMBP3BA6NNM3 1639 aa-2.16□□□□□ -2.75
RNU6-1238P-201ENST00000517215 RIMBP3Q9UFD9 1639 aa-2.16□□□□□ -2.75
RNU6-1238P-201ENST00000517215 SYS1-DBNDD2H3BUS1 97 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 TPST1O60507 370 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 HSBP1O75506 76 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 ATP5G1P05496 136 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 SDC4P31431 198 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 RPA3P35244 121 aaPredicted RBP-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 TNNT3P45378 269 aaPredicted RBP-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 H2BFSP57053 126 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 CDC42P60953 191 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 STX4Q12846 297 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 OR2F1Q13607 317 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 RAB11BQ15907 218 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 CLPSL2Q6UWE3 100 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 LYPD5Q6UWN5 251 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 SNX29P2Q8IUI4 249 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 LRRC18Q8N456 261 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 DEFB125Q8N687 156 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 SPC24Q8NBT2 197 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 AGR3Q8TD06 166 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 HAVCR2Q8TDQ0 301 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 POP5Q969H6 163 aaKnown RBP-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 SELENOSQ9BQE4 189 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 ERP44Q9BS26 406 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 C20orf24Q9BUV8 137 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 CST11Q9H112 138 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 NAA60Q9H7X0 242 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 NINJ2Q9NZG7 142 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 COMMD3Q9UBI1 195 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 TP73-AS1Q9UF72 201 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 PIN4Q9Y237 131 aaKnown RBP-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 HDGFL3Q9Y3E1 203 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 ARAP1Q96P48 1450 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 KDM5AP29375 1690 aaKnown RBP-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 MGAQ8IWI9 3026 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 FER1L6Q2WGJ9 1857 aa-2.16□□□□□ -2.76
RNU6-1238P-201ENST00000517215 ZMYM4Q5VZL5 1548 aa-2.17□□□□□ -2.76
RNU6-1238P-201ENST00000517215 TMEM30CPA0ZSE6 113 aa-2.17□□□□□ -2.76
RNU6-1238P-201ENST00000517215 KRT87PA6NCN2 255 aa-2.17□□□□□ -2.76
RNU6-1238P-201ENST00000517215 EFCAB9A8MZ26 197 aa-2.17□□□□□ -2.76
RNU6-1238P-201ENST00000517215 DSTNP60981 165 aa-2.17□□□□□ -2.76
RNU6-1238P-201ENST00000517215 YPEL3P61236 119 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-1238P-201ENST00000517215 RPS24P62847 133 aaKnown RBP-2.17□□□□□ -2.76
RNU6-1238P-201ENST00000517215 HPCAP84074 193 aa-2.17□□□□□ -2.76
RNU6-1238P-201ENST00000517215 CAV1Q03135 178 aa-2.17□□□□□ -2.76
RNU6-1238P-201ENST00000517215 JOSD1Q15040 202 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-1238P-201ENST00000517215 SSX2Q16385 188 aa-2.17□□□□□ -2.76
RNU6-1238P-201ENST00000517215 BEX5Q5H9J7 111 aa-2.17□□□□□ -2.76
RNU6-1238P-201ENST00000517215 IZUMO2Q6UXV1 221 aa-2.17□□□□□ -2.76
RNU6-1238P-201ENST00000517215 COPS6Q7L5N1 327 aa-2.17□□□□□ -2.76
RNU6-1238P-201ENST00000517215 KRTAP8-1Q8IUC2 63 aa-2.17□□□□□ -2.76
RNU6-1238P-201ENST00000517215 FUNDC1Q8IVP5 155 aa-2.17□□□□□ -2.76
RNU6-1238P-201ENST00000517215 EIF1ADQ8N9N8 165 aaKnown RBP-2.17□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms