RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 CDK12Q9NYV4 1490 aaPredicted RBP-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 NCR2O95944 276 aa-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 LINC00614P0C842 121 aa-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 UGT2B7P16662 529 aa-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 STMN1P16949 149 aa-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 PHBP35232 272 aa-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 OR10A3P58181 314 aa-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 HACD4Q5VWC8 232 aa-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 CLEC6AQ6EIG7 209 aa-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 OR4K15Q8NH41 348 aa-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 CIB1Q99828 191 aa-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 MAP1LC3CQ9BXW4 147 aa-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 FBXO44Q9H4M3 255 aa-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 AHSPQ9NZD4 102 aa-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 WNK3Q9BYP7 1800 aa-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 GOLGA4Q13439 2230 aaKnown RBP-4.17□□□□□ -3.08
RNU6-539P-201ENST00000516665 ZCCHC6Q5VYS8 1495 aaKnown RBP-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 TRAV12-2A0A075B6T6 113 aa-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 GOLGA8MH3BSY2 632 aa-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 HMMRO75330 724 aa-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 OR2J2O76002 312 aa-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 MT1GP13640 62 aa-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 PSMB6P28072 239 aa-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 GLRXP35754 106 aa-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 FABP9Q0Z7S8 132 aa-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 PIGYQ3MUY2 71 aa-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 TRAPPC6BQ86SZ2 158 aa-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 METTL8Q9H825 291 aaKnown RBP-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 TREM1Q9NP99 234 aa-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 BET1LQ9NYM9 111 aa-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 BLOC1S6Q9UL45 172 aa-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 ARL5AQ9Y689 179 aa-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 KIF15Q9NS87 1388 aa-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 RANBP2P49792 3224 aaKnown RBP-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 BOD1L1Q8NFC6 3051 aa-4.18□□□□□ -3.08
RNU6-539P-201ENST00000516665 DCCP43146 1447 aa-4.19□□□□□ -3.08
RNU6-539P-201ENST00000516665 COX4I1P13073 169 aa-4.19□□□□□ -3.08
RNU6-539P-201ENST00000516665 UBE2KP61086 200 aa-4.19□□□□□ -3.08
RNU6-539P-201ENST00000516665 H1FX-AS1Q4G0G2 97 aa-4.19□□□□□ -3.08
RNU6-539P-201ENST00000516665 EIF3MQ7L2H7 374 aaKnown RBP-4.19□□□□□ -3.08
RNU6-539P-201ENST00000516665 FUNDC1Q8IVP5 155 aa-4.19□□□□□ -3.08
RNU6-539P-201ENST00000516665 PKIBQ9C010 78 aa-4.19□□□□□ -3.08
RNU6-539P-201ENST00000516665 RGCCQ9H4X1 137 aa-4.19□□□□□ -3.08
RNU6-539P-201ENST00000516665 DBNDD1Q9H9R9 158 aa-4.19□□□□□ -3.08
RNU6-539P-201ENST00000516665 TMBIM4Q9HC24 238 aa-4.19□□□□□ -3.08
RNU6-539P-201ENST00000516665 CMTM6Q9NX76 183 aa-4.19□□□□□ -3.08
RNU6-539P-201ENST00000516665 COMMD3Q9UBI1 195 aa-4.19□□□□□ -3.08
RNU6-539P-201ENST00000516665 PIN1P1O15428 100 aa-4.2□□□□□ -3.08
RNU6-539P-201ENST00000516665 TAGLN2P37802 199 aaKnown RBP-4.2□□□□□ -3.08
RNU6-539P-201ENST00000516665 BEX3Q00994 111 aa-4.2□□□□□ -3.08
RNU6-539P-201ENST00000516665 SMAGPQ0VAQ4 97 aa-4.2□□□□□ -3.08
RNU6-539P-201ENST00000516665 LRRC23Q53EV4 343 aaPredicted RBP-4.2□□□□□ -3.08
RNU6-539P-201ENST00000516665 SYS1Q8N2H4 156 aa-4.2□□□□□ -3.08
RNU6-539P-201ENST00000516665 ARL5BQ96KC2 179 aa-4.2□□□□□ -3.08
RNU6-539P-201ENST00000516665 HYLS1Q96M11 299 aa-4.2□□□□□ -3.08
RNU6-539P-201ENST00000516665 IQCGQ9H095 443 aaKnown RBP-4.2□□□□□ -3.08
RNU6-539P-201ENST00000516665 SLC22A13Q9Y226 551 aa-4.2□□□□□ -3.08
RNU6-539P-201ENST00000516665 A0A1W2PP64 1363 aa-4.2□□□□□ -3.08
RNU6-539P-201ENST00000516665 AQRO60306 1485 aaKnown RBP eCLIP-4.21□□□□□ -3.08
RNU6-539P-201ENST00000516665 A0A087X0T9 212 aa-4.21□□□□□ -3.08
RNU6-539P-201ENST00000516665 hCG_2039718K7EN88 272 aa-4.21□□□□□ -3.08
RNU6-539P-201ENST00000516665 CXCL11O14625 94 aa-4.21□□□□□ -3.08
RNU6-539P-201ENST00000516665 CIB2O75838 187 aa-4.21□□□□□ -3.08
RNU6-539P-201ENST00000516665 RANBP1P43487 201 aa-4.21□□□□□ -3.08
RNU6-539P-201ENST00000516665 KRR1Q13601 381 aaKnown RBP-4.21□□□□□ -3.08
RNU6-539P-201ENST00000516665 MRPL30Q8TCC3 161 aaKnown RBP-4.21□□□□□ -3.08
RNU6-539P-201ENST00000516665 C19orf60Q96EN9 201 aa-4.21□□□□□ -3.08
RNU6-539P-201ENST00000516665 FAM210AQ96ND0 272 aa-4.21□□□□□ -3.08
RNU6-539P-201ENST00000516665 SLIT1O75093 1534 aa-4.21□□□□□ -3.08
RNU6-539P-201ENST00000516665 KDM3BQ7LBC6 1761 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 ADGRG4Q8IZF6 3080 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 TMEM94Q12767 1356 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 GOLGA8IPA6NC78 632 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 F5H5K5 113 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 NPFFO15130 113 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 ATP6V1E1P36543 226 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 RPS5P46782 204 aaKnown RBP-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 CAV1Q03135 178 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 EXOC3L4Q17RC7 722 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 FBXO48Q5FWF7 155 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 PDZD9Q8IXQ8 264 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 LRRC18Q8N456 261 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 TMEM161BQ8NDZ6 487 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 SMIM12Q96EX1 92 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 CHRAC1Q9NRG0 131 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 RMND1Q9NWS8 449 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 EURLQ9NYK6 297 aa-4.22□□□□□ -3.08
RNU6-539P-201ENST00000516665 PDE4DIPQ5VU43 2346 aa-4.22□□□□□ -3.09
RNU6-539P-201ENST00000516665 LRP6O75581 1613 aa-4.23□□□□□ -3.09
RNU6-539P-201ENST00000516665 ATMQ13315 3056 aa-4.23□□□□□ -3.09
RNU6-539P-201ENST00000516665 LRRN3E7EW58 273 aa-4.23□□□□□ -3.09
RNU6-539P-201ENST00000516665 TCRBP04435 133 aa-4.23□□□□□ -3.09
RNU6-539P-201ENST00000516665 OR10J4P0C629 311 aa-4.23□□□□□ -3.09
RNU6-539P-201ENST00000516665 RAB5CP51148 216 aa-4.23□□□□□ -3.09
RNU6-539P-201ENST00000516665 ACOT6Q3I5F7 207 aaPredicted RBP-4.23□□□□□ -3.09
RNU6-539P-201ENST00000516665 CARD17Q5XLA6 110 aa-4.23□□□□□ -3.09
RNU6-539P-201ENST00000516665 OR6N2Q8NGY6 317 aa-4.23□□□□□ -3.09
RNU6-539P-201ENST00000516665 MCUR1Q96AQ8 359 aa-4.23□□□□□ -3.09
RNU6-539P-201ENST00000516665 RASD2Q96D21 266 aa-4.23□□□□□ -3.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms