RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 RNF24Q9Y225 148 aa10.47□□□□□ -0.73
DDR1-278ENST00000515233 MRPS12O15235 138 aaKnown RBP10.46□□□□□ -0.73
DDR1-278ENST00000515233 LINC00869P0C866 280 aa10.46□□□□□ -0.73
DDR1-278ENST00000515233 HTN1P15515 57 aa10.46□□□□□ -0.73
DDR1-278ENST00000515233 MCFD2Q8NI22 146 aa10.46□□□□□ -0.73
DDR1-278ENST00000515233 LRRC20Q8TCA0 184 aa10.46□□□□□ -0.73
DDR1-278ENST00000515233 TMEM263Q8WUH6 116 aaKnown RBP10.46□□□□□ -0.73
DDR1-278ENST00000515233 ZNF503Q96F45 646 aa10.46□□□□□ -0.73
DDR1-278ENST00000515233 UHRF2Q96PU4 802 aa10.46□□□□□ -0.73
DDR1-278ENST00000515233 C20orf144Q9BQM9 153 aa10.46□□□□□ -0.73
DDR1-278ENST00000515233 NPVFQ9HCQ7 196 aa10.46□□□□□ -0.73
DDR1-278ENST00000515233 NOP10Q9NPE3 64 aaKnown RBP10.46□□□□□ -0.73
DDR1-278ENST00000515233 SMCO3A2RU48 225 aa10.45□□□□□ -0.74
DDR1-278ENST00000515233 FNDC10F2Z333 226 aa10.45□□□□□ -0.74
DDR1-278ENST00000515233 H7BYZ3 331 aa10.45□□□□□ -0.74
DDR1-278ENST00000515233 K7EPK0 472 aa10.45□□□□□ -0.74
DDR1-278ENST00000515233 CXCL2P19875 107 aa10.45□□□□□ -0.74
DDR1-278ENST00000515233 UBE2MP61081 183 aaKnown RBP10.45□□□□□ -0.74
DDR1-278ENST00000515233 POLR2GP62487 172 aaKnown RBP eCLIP10.45□□□□□ -0.74
DDR1-278ENST00000515233 C4orf46Q504U0 113 aa10.45□□□□□ -0.74
DDR1-278ENST00000515233 PYDC2Q56P42 97 aa10.45□□□□□ -0.74
DDR1-278ENST00000515233 PATE2Q6UY27 113 aa10.45□□□□□ -0.74
DDR1-278ENST00000515233 Q8N1X5 172 aa10.45□□□□□ -0.74
DDR1-278ENST00000515233 LINC00612Q8N6U2 182 aa10.45□□□□□ -0.74
DDR1-278ENST00000515233 OR10J6PQ8NGY7 276 aa10.45□□□□□ -0.74
DDR1-278ENST00000515233 RPUSD4Q96CM3 377 aaKnown RBP10.45□□□□□ -0.74
DDR1-278ENST00000515233 SMIM8Q96KF7 97 aa10.45□□□□□ -0.74
DDR1-278ENST00000515233 PSENENQ9NZ42 101 aa10.45□□□□□ -0.74
DDR1-278ENST00000515233 ADAP1O75689 374 aa10.44□□□□□ -0.74
DDR1-278ENST00000515233 DLK1P80370 383 aa10.44□□□□□ -0.74
DDR1-278ENST00000515233 RXFP4Q8TDU9 374 aa10.44□□□□□ -0.74
DDR1-278ENST00000515233 UPK3BQ9BT76 320 aa10.44□□□□□ -0.74
DDR1-278ENST00000515233 ARL6Q9H0F7 186 aa10.44□□□□□ -0.74
DDR1-278ENST00000515233 ARV1Q9H2C2 271 aa10.44□□□□□ -0.74
DDR1-278ENST00000515233 Q9H3A6 140 aa10.44□□□□□ -0.74
DDR1-278ENST00000515233 ZNF331Q9NQX6 463 aaPredicted RBP10.44□□□□□ -0.74
DDR1-278ENST00000515233 H3BMQ9 156 aa10.43□□□□□ -0.74
DDR1-278ENST00000515233 H3BNG1 76 aa10.43□□□□□ -0.74
DDR1-278ENST00000515233 ANXA7P20073 488 aaKnown RBP10.43□□□□□ -0.74
DDR1-278ENST00000515233 BTF3P20290 206 aaKnown RBP10.43□□□□□ -0.74
DDR1-278ENST00000515233 OR5I1Q13606 314 aa10.43□□□□□ -0.74
DDR1-278ENST00000515233 TTC32Q5I0X7 151 aa10.43□□□□□ -0.74
DDR1-278ENST00000515233 PXDC1Q5TGL8 231 aa10.43□□□□□ -0.74
DDR1-278ENST00000515233 LCN15Q6UWW0 184 aa10.43□□□□□ -0.74
DDR1-278ENST00000515233 TMEM14EPQ6UXP3 125 aa10.43□□□□□ -0.74
DDR1-278ENST00000515233 SPATA12Q7Z6I5 190 aa10.43□□□□□ -0.74
DDR1-278ENST00000515233 GNPNAT1Q96EK6 184 aaPredicted RBP10.43□□□□□ -0.74
DDR1-278ENST00000515233 V9GYH0 126 aa10.43□□□□□ -0.74
DDR1-278ENST00000515233 APOBP04114 4563 aaKnown RBP10.42□□□□□ -0.74
DDR1-278ENST00000515233 TRAV26-1A0A087WT03 109 aa10.42□□□□□ -0.74
DDR1-278ENST00000515233 A0A1W2PPQ1 181 aa10.42□□□□□ -0.74
DDR1-278ENST00000515233 C9orf170A2RU37 121 aa10.42□□□□□ -0.74
DDR1-278ENST00000515233 M6PRP20645 277 aa10.42□□□□□ -0.74
DDR1-278ENST00000515233 TEPPQ6URK8 271 aa10.42□□□□□ -0.74
DDR1-278ENST00000515233 OR10P1Q8NGE3 313 aa10.42□□□□□ -0.74
DDR1-278ENST00000515233 SLC50A1Q9BRV3 221 aa10.42□□□□□ -0.74
DDR1-278ENST00000515233 KRTAP1-5Q9BYS1 174 aa10.42□□□□□ -0.74
DDR1-278ENST00000515233 ZNF701M0R085 212 aaPredicted RBP10.41□□□□□ -0.74
DDR1-278ENST00000515233 NOL3O60936 208 aaKnown RBP10.41□□□□□ -0.74
DDR1-278ENST00000515233 CCNKO75909 580 aa10.41□□□□□ -0.74
DDR1-278ENST00000515233 RRAS2P62070 204 aaPredicted RBP10.41□□□□□ -0.74
DDR1-278ENST00000515233 KIR3DS1Q14943 382 aa10.41□□□□□ -0.74
DDR1-278ENST00000515233 ESRGQ1W209 222 aa10.41□□□□□ -0.74
DDR1-278ENST00000515233 LINC00305Q7Z4B0 112 aa10.41□□□□□ -0.74
DDR1-278ENST00000515233 CCDC28AQ8IWP9 274 aa10.41□□□□□ -0.74
DDR1-278ENST00000515233 DNAH5Q8TE73 4624 aa10.4□□□□□ -0.74
DDR1-278ENST00000515233 SSSCA1O60232 199 aa10.4□□□□□ -0.74
DDR1-278ENST00000515233 METTL15P1P0C7V9 234 aa10.4□□□□□ -0.74
DDR1-278ENST00000515233 HOXA5P20719 270 aa10.4□□□□□ -0.74
DDR1-278ENST00000515233 TAS2R30P59541 319 aa10.4□□□□□ -0.74
DDR1-278ENST00000515233 CCDC190Q86UF4 302 aa10.4□□□□□ -0.74
DDR1-278ENST00000515233 BPIFA4PQ86YQ2 179 aa10.4□□□□□ -0.74
DDR1-278ENST00000515233 NDUFA13Q9P0J0 144 aa10.4□□□□□ -0.74
DDR1-278ENST00000515233 MGAT4CQ9UBM8 478 aa10.4□□□□□ -0.74
DDR1-278ENST00000515233 A0A0J9YY99 117 aa10.39□□□□□ -0.75
DDR1-278ENST00000515233 A6NHS1 94 aa10.39□□□□□ -0.75
DDR1-278ENST00000515233 GOSR2O14653 212 aa10.39□□□□□ -0.75
DDR1-278ENST00000515233 TSC22D2O75157 780 aa10.39□□□□□ -0.75
DDR1-278ENST00000515233 RLN2P04090 185 aa10.39□□□□□ -0.75
DDR1-278ENST00000515233 PRB4P10163 310 aaPredicted RBP10.39□□□□□ -0.75
DDR1-278ENST00000515233 SLC38A11Q08AI6 406 aa10.39□□□□□ -0.75
DDR1-278ENST00000515233 GFI1BQ5VTD9 330 aa10.39□□□□□ -0.75
DDR1-278ENST00000515233 ZNF546Q86UE3 836 aa10.39□□□□□ -0.75
DDR1-278ENST00000515233 ZBTB8BQ8NAP8 495 aaPredicted RBP10.39□□□□□ -0.75
DDR1-278ENST00000515233 GGACTQ9BVM4 153 aa10.39□□□□□ -0.75
DDR1-278ENST00000515233 SCRT2Q9NQ03 307 aa10.39□□□□□ -0.75
DDR1-278ENST00000515233 MRPS16Q9Y3D3 137 aaKnown RBP10.39□□□□□ -0.75
DDR1-278ENST00000515233 GAGE12BA1L429 117 aa10.38□□□□□ -0.75
DDR1-278ENST00000515233 SNURFLB1AK76 121 aa10.38□□□□□ -0.75
DDR1-278ENST00000515233 PRAC2D3DTV9 90 aa10.38□□□□□ -0.75
DDR1-278ENST00000515233 AGPAT2O15120 278 aa10.38□□□□□ -0.75
DDR1-278ENST00000515233 GAGE7O76087 117 aa10.38□□□□□ -0.75
DDR1-278ENST00000515233 OR4E1P0C645 316 aa10.38□□□□□ -0.75
DDR1-278ENST00000515233 GAGE12FP0CL80 117 aa10.38□□□□□ -0.75
DDR1-278ENST00000515233 GAGE12GP0CL81 117 aa10.38□□□□□ -0.75
DDR1-278ENST00000515233 GAGE12IP0CL82 117 aa10.38□□□□□ -0.75
DDR1-278ENST00000515233 S100A5P33763 92 aa10.38□□□□□ -0.75
DDR1-278ENST00000515233 KRTAP10-2P60368 255 aa10.38□□□□□ -0.75
DDR1-278ENST00000515233 DAZ2Q13117 558 aaKnown RBP10.38□□□□□ -0.75
DDR1-278ENST00000515233 TMEM37Q8WXS4 190 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms