RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ZNF469Q96JG9 3925 aaPredicted RBP0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 SPTBP11277 2137 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 C17orf112F2Z3M2 114 aa0.9□□□□□ -2.27
HMGCS1-207ENST00000514610 F8W1H4 67 aa0.9□□□□□ -2.27
HMGCS1-207ENST00000514610 MFSD11O43934 449 aa0.9□□□□□ -2.27
HMGCS1-207ENST00000514610 IFNA14P01570 189 aa0.9□□□□□ -2.27
HMGCS1-207ENST00000514610 APOA2P02652 100 aa0.9□□□□□ -2.27
HMGCS1-207ENST00000514610 KLRD1Q13241 179 aa0.9□□□□□ -2.27
HMGCS1-207ENST00000514610 LYG2Q86SG7 212 aa0.9□□□□□ -2.27
HMGCS1-207ENST00000514610 GKN2Q86XP6 184 aa0.9□□□□□ -2.27
HMGCS1-207ENST00000514610 CHCHD1Q96BP2 118 aaKnown RBP0.9□□□□□ -2.27
HMGCS1-207ENST00000514610 CCDC94Q9BW85 323 aaPredicted RBP0.9□□□□□ -2.27
HMGCS1-207ENST00000514610 PBOV1Q9GZY1 135 aa0.9□□□□□ -2.27
HMGCS1-207ENST00000514610 SH3BGRL3Q9H299 93 aa0.9□□□□□ -2.27
HMGCS1-207ENST00000514610 FRMPD1Q5SYB0 1578 aa0.9□□□□□ -2.27
HMGCS1-207ENST00000514610 OR2T8A6NH00 312 aa0.89□□□□□ -2.27
HMGCS1-207ENST00000514610 CSN2P05814 226 aa0.89□□□□□ -2.27
HMGCS1-207ENST00000514610 OR10J4P0C629 311 aa0.89□□□□□ -2.27
HMGCS1-207ENST00000514610 CXCL8P10145 99 aa0.89□□□□□ -2.27
HMGCS1-207ENST00000514610 PRB4P10163 310 aaPredicted RBP0.89□□□□□ -2.27
HMGCS1-207ENST00000514610 OGNP20774 298 aaKnown RBP0.89□□□□□ -2.27
HMGCS1-207ENST00000514610 TMEM14EPQ6UXP3 125 aa0.89□□□□□ -2.27
HMGCS1-207ENST00000514610 Q8N6K4 173 aa0.89□□□□□ -2.27
HMGCS1-207ENST00000514610 SYNMO15061 1565 aa0.88□□□□□ -2.27
HMGCS1-207ENST00000514610 H3BRM9 83 aa0.88□□□□□ -2.27
HMGCS1-207ENST00000514610 NUPR1O60356 82 aa0.88□□□□□ -2.27
HMGCS1-207ENST00000514610 RAB5CP51148 216 aa0.88□□□□□ -2.27
HMGCS1-207ENST00000514610 EFNA4P52798 201 aa0.88□□□□□ -2.27
HMGCS1-207ENST00000514610 POU6F1Q14863 301 aa0.88□□□□□ -2.27
HMGCS1-207ENST00000514610 TEN1Q86WV5 123 aa0.88□□□□□ -2.27
HMGCS1-207ENST00000514610 PLPP5Q8NEB5 264 aa0.88□□□□□ -2.27
HMGCS1-207ENST00000514610 MAP1LC3BQ9GZQ8 125 aa0.88□□□□□ -2.27
HMGCS1-207ENST00000514610 TMEM138Q9NPI0 162 aa0.88□□□□□ -2.27
HMGCS1-207ENST00000514610 GID8Q9NWU2 228 aa0.88□□□□□ -2.27
HMGCS1-207ENST00000514610 OR52A1Q9UKL2 312 aa0.88□□□□□ -2.27
HMGCS1-207ENST00000514610 TMEM238C9JI98 176 aa0.87□□□□□ -2.27
HMGCS1-207ENST00000514610 RER1O15258 196 aa0.87□□□□□ -2.27
HMGCS1-207ENST00000514610 PIAS1O75925 651 aa0.87□□□□□ -2.27
HMGCS1-207ENST00000514610 G0S2P27469 103 aa0.87□□□□□ -2.27
HMGCS1-207ENST00000514610 EIF3IQ13347 325 aaKnown RBP0.87□□□□□ -2.27
HMGCS1-207ENST00000514610 HAGHLQ6PII5 290 aaPredicted RBP0.87□□□□□ -2.27
HMGCS1-207ENST00000514610 OR5AS1Q8N127 324 aa0.87□□□□□ -2.27
HMGCS1-207ENST00000514610 MALSU1Q96EH3 234 aa0.87□□□□□ -2.27
HMGCS1-207ENST00000514610 HYLS1Q96M11 299 aa0.87□□□□□ -2.27
HMGCS1-207ENST00000514610 CACYBPQ9HB71 228 aaKnown RBP0.87□□□□□ -2.27
HMGCS1-207ENST00000514610 UFC1Q9Y3C8 167 aa0.87□□□□□ -2.27
HMGCS1-207ENST00000514610 ASB4Q9Y574 426 aa0.87□□□□□ -2.27
HMGCS1-207ENST00000514610 ZNF462Q96JM2 2506 aa0.87□□□□□ -2.27
HMGCS1-207ENST00000514610 NISCHQ9Y2I1 1504 aa0.86□□□□□ -2.27
HMGCS1-207ENST00000514610 HIST1H2BKO60814 126 aa0.86□□□□□ -2.27
HMGCS1-207ENST00000514610 IFNA4P05014 189 aa0.86□□□□□ -2.27
HMGCS1-207ENST00000514610 HIST1H2BJP06899 126 aa0.86□□□□□ -2.27
HMGCS1-207ENST00000514610 GLRXP35754 106 aa0.86□□□□□ -2.27
HMGCS1-207ENST00000514610 KRTAP26-1Q6PEX3 210 aa0.86□□□□□ -2.27
HMGCS1-207ENST00000514610 ARPINQ7Z6K5 226 aa0.86□□□□□ -2.27
HMGCS1-207ENST00000514610 TMEM70Q9BUB7 260 aa0.86□□□□□ -2.27
HMGCS1-207ENST00000514610 TNFSF18Q9UNG2 199 aa0.86□□□□□ -2.27
HMGCS1-207ENST00000514610 TANC2Q9HCD6 1990 aa0.85□□□□□ -2.27
HMGCS1-207ENST00000514610 A0A087WSZ3 146 aa0.85□□□□□ -2.27
HMGCS1-207ENST00000514610 hDV103S1A0JD37 113 aa0.85□□□□□ -2.27
HMGCS1-207ENST00000514610 C9orf170A2RU37 121 aa0.85□□□□□ -2.27
HMGCS1-207ENST00000514610 C5orf67F2Z3F1 127 aa0.85□□□□□ -2.27
HMGCS1-207ENST00000514610 COX7CP15954 63 aa0.85□□□□□ -2.27
HMGCS1-207ENST00000514610 LTC4SQ16873 150 aa0.85□□□□□ -2.27
HMGCS1-207ENST00000514610 FKBP1CQ5VVH2 108 aa0.85□□□□□ -2.27
HMGCS1-207ENST00000514610 GRINAQ7Z429 371 aa0.85□□□□□ -2.27
HMGCS1-207ENST00000514610 AHNAK2Q8IVF2 5795 aa0.85□□□□□ -2.27
HMGCS1-207ENST00000514610 LRRC18Q8N456 261 aa0.85□□□□□ -2.27
HMGCS1-207ENST00000514610 ZNF431Q8TF32 576 aaPredicted RBP0.85□□□□□ -2.27
HMGCS1-207ENST00000514610 ZC2HC1AQ96GY0 325 aa0.85□□□□□ -2.27
HMGCS1-207ENST00000514610 PPYP01298 95 aa0.84□□□□□ -2.27
HMGCS1-207ENST00000514610 GNG10P50151 68 aa0.84□□□□□ -2.27
HMGCS1-207ENST00000514610 TCTAP57738 103 aa0.84□□□□□ -2.27
HMGCS1-207ENST00000514610 C1orf140Q5VVS0 124 aa0.84□□□□□ -2.27
HMGCS1-207ENST00000514610 CROCCP2Q86T23 111 aa0.84□□□□□ -2.27
HMGCS1-207ENST00000514610 STX19Q8N4C7 294 aa0.84□□□□□ -2.27
HMGCS1-207ENST00000514610 NEK7Q8TDX7 302 aa0.84□□□□□ -2.27
HMGCS1-207ENST00000514610 PRRT1Q99946 306 aa0.84□□□□□ -2.27
HMGCS1-207ENST00000514610 WFDC10AQ9H1F0 79 aa0.84□□□□□ -2.27
HMGCS1-207ENST00000514610 RNF11Q9Y3C5 154 aa0.84□□□□□ -2.27
HMGCS1-207ENST00000514610 ANK1P16157 1881 aa0.84□□□□□ -2.28
HMGCS1-207ENST00000514610 TECPR2O15040 1411 aa0.83□□□□□ -2.28
HMGCS1-207ENST00000514610 TRAV27A0A087WT01 109 aa0.83□□□□□ -2.28
HMGCS1-207ENST00000514610 IDO1P14902 403 aa0.83□□□□□ -2.28
HMGCS1-207ENST00000514610 SERPINB1P30740 379 aa0.83□□□□□ -2.28
HMGCS1-207ENST00000514610 CRYBA4P53673 196 aa0.83□□□□□ -2.28
HMGCS1-207ENST00000514610 HBBP68871 147 aa0.83□□□□□ -2.28
HMGCS1-207ENST00000514610 RTL8BQ17RB0 113 aa0.83□□□□□ -2.28
HMGCS1-207ENST00000514610 C3orf33Q6P1S2 294 aa0.83□□□□□ -2.28
HMGCS1-207ENST00000514610 KRTAP19-3Q7Z4W3 81 aa0.83□□□□□ -2.28
HMGCS1-207ENST00000514610 PLEKHB2Q96CS7 222 aa0.83□□□□□ -2.28
HMGCS1-207ENST00000514610 RTL8AQ9BWD3 113 aa0.83□□□□□ -2.28
HMGCS1-207ENST00000514610 MUC4Q99102 2169 aa0.83□□□□□ -2.28
HMGCS1-207ENST00000514610 RFX7Q2KHR2 1363 aa0.83□□□□□ -2.28
HMGCS1-207ENST00000514610 PBRM1Q86U86 1689 aa0.82□□□□□ -2.28
HMGCS1-207ENST00000514610 IGLV3-32A0A0A0MS00 114 aa0.82□□□□□ -2.28
HMGCS1-207ENST00000514610 TRAV5A0A0B4J249 113 aa0.82□□□□□ -2.28
HMGCS1-207ENST00000514610 E5RI56 91 aa0.82□□□□□ -2.28
HMGCS1-207ENST00000514610 JMJD7-PLA2G4BH0Y9G9 81 aa0.82□□□□□ -2.28
HMGCS1-207ENST00000514610 RPL35P42766 123 aaKnown RBP0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms