RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 SPIN3Q5JUX0 258 aa2.59□□□□□ -1.99
RFC1-216ENST00000514572 TMPPEQ6ZT21 453 aa2.59□□□□□ -1.99
RFC1-216ENST00000514572 C3orf62Q6ZUJ4 267 aa2.59□□□□□ -1.99
RFC1-216ENST00000514572 HIST2H3AQ71DI3 136 aa2.59□□□□□ -1.99
RFC1-216ENST00000514572 CDC26Q8NHZ8 85 aa2.59□□□□□ -1.99
RFC1-216ENST00000514572 GPR119Q8TDV5 335 aa2.59□□□□□ -1.99
RFC1-216ENST00000514572 GNPNAT1Q96EK6 184 aaPredicted RBP2.59□□□□□ -1.99
RFC1-216ENST00000514572 TVP23CQ96ET8 276 aa2.59□□□□□ -1.99
RFC1-216ENST00000514572 SLC2A9Q9NRM0 540 aa2.59□□□□□ -1.99
RFC1-216ENST00000514572 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.59□□□□□ -1.99
RFC1-216ENST00000514572 PCTPQ9UKL6 214 aa2.59□□□□□ -1.99
RFC1-216ENST00000514572 PXMP4Q9Y6I8 212 aa2.59□□□□□ -1.99
RFC1-216ENST00000514572 IGHV1-18A0A0C4DH31 117 aa2.58□□□□□ -2
RFC1-216ENST00000514572 CLDN24A6NM45 220 aa2.58□□□□□ -2
RFC1-216ENST00000514572 OR4C45A6NMZ5 311 aa2.58□□□□□ -2
RFC1-216ENST00000514572 C9JCJ5 164 aa2.58□□□□□ -2
RFC1-216ENST00000514572 INMT-MINDY4F8WBC2 141 aa2.58□□□□□ -2
RFC1-216ENST00000514572 H3BQF6 201 aa2.58□□□□□ -2
RFC1-216ENST00000514572 CHP2O43745 196 aa2.58□□□□□ -2
RFC1-216ENST00000514572 PIAS1O75925 651 aa2.58□□□□□ -2
RFC1-216ENST00000514572 IGKV1-17P01599 117 aa2.58□□□□□ -2
RFC1-216ENST00000514572 IGLV6-57P01721 117 aa2.58□□□□□ -2
RFC1-216ENST00000514572 IFNA6P05013 189 aa2.58□□□□□ -2
RFC1-216ENST00000514572 CAV1Q03135 178 aa2.58□□□□□ -2
RFC1-216ENST00000514572 CLDN22Q8N7P3 220 aa2.58□□□□□ -2
RFC1-216ENST00000514572 OR4K13Q8NH42 304 aa2.58□□□□□ -2
RFC1-216ENST00000514572 CLDND2Q8NHS1 167 aa2.58□□□□□ -2
RFC1-216ENST00000514572 MRPL57Q9BQC6 102 aaKnown RBP2.58□□□□□ -2
RFC1-216ENST00000514572 IGLV10-54A0A075B6I4 117 aa2.57□□□□□ -2
RFC1-216ENST00000514572 IGKV1D-17A0A075B6S4 117 aa2.57□□□□□ -2
RFC1-216ENST00000514572 IGHV3-73A0A0B4J1V6 119 aa2.57□□□□□ -2
RFC1-216ENST00000514572 PIN1P1O15428 100 aa2.57□□□□□ -2
RFC1-216ENST00000514572 NDUFB2O95178 105 aa2.57□□□□□ -2
RFC1-216ENST00000514572 HMGN2P05204 90 aaKnown RBP2.57□□□□□ -2
RFC1-216ENST00000514572 P0C880 135 aa2.57□□□□□ -2
RFC1-216ENST00000514572 CBR1P16152 277 aa2.57□□□□□ -2
RFC1-216ENST00000514572 PHBP35232 272 aa2.57□□□□□ -2
RFC1-216ENST00000514572 SPCS3P61009 180 aa2.57□□□□□ -2
RFC1-216ENST00000514572 MOGQ16653 247 aa2.57□□□□□ -2
RFC1-216ENST00000514572 PYDC2Q56P42 97 aa2.57□□□□□ -2
RFC1-216ENST00000514572 AMTNQ6UX39 209 aa2.57□□□□□ -2
RFC1-216ENST00000514572 AAED1Q7RTV5 226 aa2.57□□□□□ -2
RFC1-216ENST00000514572 GRINAQ7Z429 371 aa2.57□□□□□ -2
RFC1-216ENST00000514572 OR1L8Q8NGR8 309 aa2.57□□□□□ -2
RFC1-216ENST00000514572 OR2T4Q8NH00 348 aa2.57□□□□□ -2
RFC1-216ENST00000514572 OR10A6Q8NH74 314 aa2.57□□□□□ -2
RFC1-216ENST00000514572 ZNF563Q8TA94 476 aa2.57□□□□□ -2
RFC1-216ENST00000514572 POP5Q969H6 163 aaKnown RBP2.57□□□□□ -2
RFC1-216ENST00000514572 PECRQ9BY49 303 aa2.57□□□□□ -2
RFC1-216ENST00000514572 ACER3Q9NUN7 267 aa2.57□□□□□ -2
RFC1-216ENST00000514572 FKBP14Q9NWM8 211 aa2.57□□□□□ -2
RFC1-216ENST00000514572 TAAR3PQ9P1P4 343 aa2.57□□□□□ -2
RFC1-216ENST00000514572 SNX12Q9UMY4 172 aa2.57□□□□□ -2
RFC1-216ENST00000514572 SLC35A3Q9Y2D2 325 aa2.57□□□□□ -2
RFC1-216ENST00000514572 TENM2Q9NT68 2774 aa2.56□□□□□ -2
RFC1-216ENST00000514572 IGKV2-24A0A0C4DH68 120 aa2.56□□□□□ -2
RFC1-216ENST00000514572 IGHV1-69-2A0A0G2JMI3 117 aa2.56□□□□□ -2
RFC1-216ENST00000514572 A8MT66 165 aa2.56□□□□□ -2
RFC1-216ENST00000514572 CLDN25C9JDP6 229 aa2.56□□□□□ -2
RFC1-216ENST00000514572 LYNX1G3V0Z9 82 aa2.56□□□□□ -2
RFC1-216ENST00000514572 COX7A2LO14548 114 aa2.56□□□□□ -2
RFC1-216ENST00000514572 LYNX1P0DP58 116 aa2.56□□□□□ -2
RFC1-216ENST00000514572 CRHBPP24387 322 aa2.56□□□□□ -2
RFC1-216ENST00000514572 GLRXP35754 106 aa2.56□□□□□ -2
RFC1-216ENST00000514572 SERPINB10P48595 397 aa2.56□□□□□ -2
RFC1-216ENST00000514572 SERPINB9P50453 376 aa2.56□□□□□ -2
RFC1-216ENST00000514572 H3F3AP84243 136 aa2.56□□□□□ -2
RFC1-216ENST00000514572 TAF9Q16594 264 aa2.56□□□□□ -2
RFC1-216ENST00000514572 ACOT6Q3I5F7 207 aaPredicted RBP2.56□□□□□ -2
RFC1-216ENST00000514572 TNFAIP8L3Q5GJ75 292 aa2.56□□□□□ -2
RFC1-216ENST00000514572 ZNF322Q6U7Q0 402 aaPredicted RBP2.56□□□□□ -2
RFC1-216ENST00000514572 C5orf46Q6UWT4 87 aa2.56□□□□□ -2
RFC1-216ENST00000514572 SPATA12Q7Z6I5 190 aa2.56□□□□□ -2
RFC1-216ENST00000514572 CALHM3Q86XJ0 350 aa2.56□□□□□ -2
RFC1-216ENST00000514572 SIGLECL1Q8N7X8 197 aa2.56□□□□□ -2
RFC1-216ENST00000514572 DAND5Q8N907 189 aa2.56□□□□□ -2
RFC1-216ENST00000514572 OR51D1Q8NGF3 324 aa2.56□□□□□ -2
RFC1-216ENST00000514572 LHFPL5Q8TAF8 219 aa2.56□□□□□ -2
RFC1-216ENST00000514572 SFRP2Q96HF1 295 aa2.56□□□□□ -2
RFC1-216ENST00000514572 MGLLQ99685 303 aa2.56□□□□□ -2
RFC1-216ENST00000514572 ZNF391Q9UJN7 358 aa2.56□□□□□ -2
RFC1-216ENST00000514572 UTP11Q9Y3A2 253 aaKnown RBP2.56□□□□□ -2
RFC1-216ENST00000514572 HSPE1-MOB4S4R3N1 261 aa2.56□□□□□ -2
RFC1-216ENST00000514572 RYR3Q15413 4870 aa2.55□□□□□ -2
RFC1-216ENST00000514572 A0A087WUU8 490 aa2.55□□□□□ -2
RFC1-216ENST00000514572 A0A096LPI6 279 aa2.55□□□□□ -2
RFC1-216ENST00000514572 SMIM9A6NGZ8 99 aa2.55□□□□□ -2
RFC1-216ENST00000514572 LST1O00453 97 aa2.55□□□□□ -2
RFC1-216ENST00000514572 FGF6P10767 208 aa2.55□□□□□ -2
RFC1-216ENST00000514572 NEFHP12036 1026 aa2.55□□□□□ -2
RFC1-216ENST00000514572 LPAR6P43657 344 aa2.55□□□□□ -2
RFC1-216ENST00000514572 GZMMP51124 257 aa2.55□□□□□ -2
RFC1-216ENST00000514572 POLR2HP52434 150 aaKnown RBP2.55□□□□□ -2
RFC1-216ENST00000514572 RBM11P57052 281 aaKnown RBP2.55□□□□□ -2
RFC1-216ENST00000514572 COPZ1P61923 177 aa2.55□□□□□ -2
RFC1-216ENST00000514572 CCL8P80075 99 aa2.55□□□□□ -2
RFC1-216ENST00000514572 HIST2H3PS2Q5TEC6 136 aa2.55□□□□□ -2
RFC1-216ENST00000514572 RPS27LQ71UM5 84 aaKnown RBP2.55□□□□□ -2
RFC1-216ENST00000514572 CMTM2Q8TAZ6 248 aa2.55□□□□□ -2
RFC1-216ENST00000514572 RAB2BQ8WUD1 216 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms