RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 MTURNQ8N3F0 131 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 KCNS2Q9ULS6 477 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 CORTO00230 105 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 SMIM17P0DL12 118 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 KIR2DS2P43631 304 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 LINC01559Q495D7 138 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 OR4A47Q6IF82 309 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 KLHDC1Q8N7A1 406 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 C17orf77Q96MU5 243 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 SPAG8Q99932 426 aaPredicted RBP5.84□□□□□ -1.47
CLIP1-205ENST00000514271 TCF19Q9Y242 345 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 RP1L1Q8IWN7 2480 aaPredicted RBP5.83□□□□□ -1.48
CLIP1-205ENST00000514271 HELZ2Q9BYK8 2649 aaKnown RBP5.83□□□□□ -1.48
CLIP1-205ENST00000514271 NBR2O15453 112 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 HOXA4Q00056 320 aaPredicted RBP5.83□□□□□ -1.48
CLIP1-205ENST00000514271 MPV17L2Q567V2 206 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 MRPL54Q6P161 138 aaKnown RBP5.83□□□□□ -1.48
CLIP1-205ENST00000514271 Q6ZN92 141 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 SPATA25Q9BR10 227 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 TMEM167BQ9NRX6 74 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 SIGLEC8Q9NYZ4 499 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 AMMECR1Q9Y4X0 333 aaPredicted RBP5.83□□□□□ -1.48
CLIP1-205ENST00000514271 DCHS2Q6V1P9 2916 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 M0R1W7 72 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 NDUFB3O43676 98 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 APCSP02743 223 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 PSG1P11464 419 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 ZNF90Q03938 601 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 CD69Q07108 199 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 TCTEX1D4Q5JR98 221 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 PQLC2Q6ZP29 291 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 ZNF788Q6ZQV5 615 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 FAM19A2Q8N3H0 131 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 GCSAMQ8N6F7 178 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 CCL17Q92583 94 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 GALMQ96C23 342 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 CNFNQ9BYD5 112 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 BPESC1Q9GZL8 116 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 BET1LQ9NYM9 111 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 BOD1L1Q8NFC6 3051 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 IGHV4-30-2A0A087WSY4 118 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 H3BRM9 83 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 MALP21145 153 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 HIST1H1AQ02539 215 aaPredicted RBP5.83□□□□□ -1.48
CLIP1-205ENST00000514271 INSIG2Q9Y5U4 225 aa5.83□□□□□ -1.48
CLIP1-205ENST00000514271 USP9YO00507 2555 aaPredicted RBP5.83□□□□□ -1.48
CLIP1-205ENST00000514271 LOC102724200A0A096LPH7 203 aaPredicted RBP5.82□□□□□ -1.48
CLIP1-205ENST00000514271 LINC01619G3V211 115 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 NCR2O95944 276 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 GRPP07492 148 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 MSMBP08118 114 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 LMO4P61968 165 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 RAX2Q96IS3 184 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 ZNF747Q9BV97 191 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 SSBP3Q9BWW4 388 aaPredicted RBP5.82□□□□□ -1.48
CLIP1-205ENST00000514271 PEMTQ9UBM1 199 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 SPTBN1Q01082 2364 aaKnown RBP5.82□□□□□ -1.48
CLIP1-205ENST00000514271 PRRC2AP48634 2157 aaKnown RBP5.82□□□□□ -1.48
CLIP1-205ENST00000514271 MUC21A0A0G2JKD1 596 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 MUC21A0A140T8X8 626 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 E7EUB6 86 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 HNRNPA3P51991 378 aaKnown RBP5.82□□□□□ -1.48
CLIP1-205ENST00000514271 CT45A1Q5HYN5 189 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 MUC21Q5SSG8 566 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 IBA57Q5T440 356 aaKnown RBP5.82□□□□□ -1.48
CLIP1-205ENST00000514271 SMIM20Q8N5G0 67 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 OR4C5Q8NGB2 326 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 CT45A3Q8NHU0 189 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 HHLA3Q9XRX5 114 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 TENM4Q6N022 2769 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 C9orf118A6NHY6 69 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 ZNF705FA8MVS1 300 aaPredicted RBP5.82□□□□□ -1.48
CLIP1-205ENST00000514271 K7EP34 96 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 FCGR3BO75015 233 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 OR5AL1P0C617 328 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 ZNF705DP0CH99 300 aaPredicted RBP5.82□□□□□ -1.48
CLIP1-205ENST00000514271 ZNF705BP0CI00 300 aaPredicted RBP5.82□□□□□ -1.48
CLIP1-205ENST00000514271 IGHV4-31P0DP07 118 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 S100GP29377 79 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 ZNF816Q0VGE8 651 aaPredicted RBP5.82□□□□□ -1.48
CLIP1-205ENST00000514271 ZCCHC24Q8N2G6 241 aaKnown RBP5.82□□□□□ -1.48
CLIP1-205ENST00000514271 ZNF709Q8N972 641 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 NABP2Q9BQ15 211 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 TMEM70Q9BUB7 260 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 SSBP4Q9BWG4 385 aaPredicted RBP5.82□□□□□ -1.48
CLIP1-205ENST00000514271 NAT8BQ9UHF3 227 aa5.82□□□□□ -1.48
CLIP1-205ENST00000514271 GCN1Q92616 2671 aaKnown RBP5.81□□□□□ -1.48
CLIP1-205ENST00000514271 NBASA2RRP1 2371 aa5.81□□□□□ -1.48
CLIP1-205ENST00000514271 HSPB6O14558 160 aa5.81□□□□□ -1.48
CLIP1-205ENST00000514271 DLX6P56179 175 aa5.81□□□□□ -1.48
CLIP1-205ENST00000514271 EDDM3BP56851 147 aa5.81□□□□□ -1.48
CLIP1-205ENST00000514271 CCDC144NLQ6NUI1 221 aa5.81□□□□□ -1.48
CLIP1-205ENST00000514271 LY6G5BQ8NDX9 201 aa5.81□□□□□ -1.48
CLIP1-205ENST00000514271 OR1N2Q8NGR9 330 aa5.81□□□□□ -1.48
CLIP1-205ENST00000514271 C16orf92Q96LL3 132 aa5.81□□□□□ -1.48
CLIP1-205ENST00000514271 MRPL36Q9P0J6 103 aaKnown RBP5.81□□□□□ -1.48
CLIP1-205ENST00000514271 HIGD1BQ9P298 99 aa5.81□□□□□ -1.48
CLIP1-205ENST00000514271 SS18L2Q9UHA2 77 aa5.81□□□□□ -1.48
CLIP1-205ENST00000514271 IGLV2-18A0A075B6J9 118 aa5.81□□□□□ -1.48
CLIP1-205ENST00000514271 UPK2O00526 184 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms