RNA–Protein interactions for RNA: ENST00000512836.5

COL6A5-205, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 2

Gene COL6A5, Length 3,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-205ENST00000512836 HYLS1Q96M11 299 aa3.34□□□□□ -1.88
COL6A5-205ENST00000512836 HDHD3Q9BSH5 251 aaPredicted RBP3.34□□□□□ -1.88
COL6A5-205ENST00000512836 AGPAT4-IT1Q9H0P7 198 aa3.34□□□□□ -1.88
COL6A5-205ENST00000512836 KLK13Q9UKR3 277 aa3.34□□□□□ -1.88
COL6A5-205ENST00000512836 MOB4Q9Y3A3 225 aa3.34□□□□□ -1.88
COL6A5-205ENST00000512836 SCN2AQ99250 2005 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 IGHV3-16A0A0C4DH30 117 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 LOC107986453A0A1B0GWG9 222 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 CPSF4LA6NMK7 179 aaKnown RBP3.33□□□□□ -1.88
COL6A5-205ENST00000512836 OOSP1A8MZH6 123 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 TMEM262E9PQX1 116 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 RFXAPO00287 272 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 LGALS3P17931 250 aaKnown RBP3.33□□□□□ -1.88
COL6A5-205ENST00000512836 LINC00205P59089 165 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 LSM3P62310 102 aaKnown RBP3.33□□□□□ -1.88
COL6A5-205ENST00000512836 ZNF90Q03938 601 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.33□□□□□ -1.88
COL6A5-205ENST00000512836 MRPL54Q6P161 138 aaKnown RBP3.33□□□□□ -1.88
COL6A5-205ENST00000512836 FAM57AQ8TBR7 257 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 VSIG2Q96IQ7 327 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 CKLFQ9UBR5 152 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 IGHV4-4A0A075B6R2 117 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 IGKV1-9A0A0C4DH69 117 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 IGKV1-12A0A0C4DH73 117 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 IGLV5-39A0A0G2JS06 123 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 PEX7O00628 323 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 UQCRQO14949 82 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 LY6G6DO95868 133 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 IGKV1D-12P01611 117 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 IGHA1P01876 353 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 HLA-DPB1P04440 258 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 SLC25A5P05141 298 aaKnown RBP3.33□□□□□ -1.88
COL6A5-205ENST00000512836 CXCL1P09341 107 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 ZNF705DP0CH99 300 aaPredicted RBP3.33□□□□□ -1.88
COL6A5-205ENST00000512836 PYYP10082 97 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 COL5A1P20908 1838 aaPredicted RBP3.33□□□□□ -1.88
COL6A5-205ENST00000512836 YPEL3P61236 119 aaPredicted RBP3.33□□□□□ -1.88
COL6A5-205ENST00000512836 EIF5AP63241 154 aaKnown RBP3.33□□□□□ -1.88
COL6A5-205ENST00000512836 PDE4DIPQ5VU43 2346 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 EIF5AL1Q6IS14 154 aaKnown RBP3.33□□□□□ -1.88
COL6A5-205ENST00000512836 TMEM91Q6ZNR0 172 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 S100A13Q99584 98 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 PYGO2Q9BRQ0 406 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 SLC25A2Q9BXI2 301 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 C6orf106Q9H6K1 298 aaPredicted RBP3.33□□□□□ -1.88
COL6A5-205ENST00000512836 NINQ8N4C6 2090 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 BUB1B-PAK6H3BSN5 160 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 TMEM256-PLSCR3K7ERE1 68 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 NDUFB2O95178 105 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 HLA-DRB4P13762 266 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 MPGP29372 298 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 DEFA5Q01523 94 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 CEMP1Q6PRD7 247 aaPredicted RBP3.33□□□□□ -1.88
COL6A5-205ENST00000512836 SLC25A42Q86VD7 318 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 TMEM252Q8N6L7 170 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 OR4X2Q8NGF9 303 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 CCL4L1Q8NHW4 92 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 SMCO4Q9NRQ5 59 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 HLA-DRB4X5D2U9 266 aa3.33□□□□□ -1.88
COL6A5-205ENST00000512836 TRAV12-2A0A075B6T6 113 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 IGHV4-30-2A0A087WSY4 118 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 IGHV1-45A0A0A0MS14 117 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 MUC21A0A0G2JKD1 596 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 C9JCJ5 164 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 HRASP01112 189 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 STATHP02808 62 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 FGF12P61328 243 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 ICAM4Q14773 271 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 LGALS9BQ3B8N2 356 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 LGALS9CQ6DKI2 356 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 NFE4Q86UQ8 179 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 TIMM17AQ99595 171 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 HIST1H2BLQ99880 126 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 ZNF286AQ9HBT8 521 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 FAM60AQ9NP50 221 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 CMC2Q9NRP2 79 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 TRANK1O15050 2925 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 IGHV1OR15-9A0A0B4J2B8 117 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 ZNF705GA8MUZ8 300 aaPredicted RBP3.32□□□□□ -1.88
COL6A5-205ENST00000512836 DUSP14O95147 198 aaKnown RBP3.32□□□□□ -1.88
COL6A5-205ENST00000512836 CASC10Q5T4H9 136 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 FAM53AQ6NSI3 398 aaPredicted RBP3.32□□□□□ -1.88
COL6A5-205ENST00000512836 LSM10Q969L4 123 aaKnown RBP3.32□□□□□ -1.88
COL6A5-205ENST00000512836 WFDC6Q9BQY6 131 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 PLA2G12AQ9BZM1 189 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 NAA60Q9H7X0 242 aa3.32□□□□□ -1.88
COL6A5-205ENST00000512836 TXNL4BQ9NX01 149 aaKnown RBP3.32□□□□□ -1.88
COL6A5-205ENST00000512836 PPP1R3DO95685 299 aa3.31□□□□□ -1.88
COL6A5-205ENST00000512836 MT-ND6P03923 174 aa3.31□□□□□ -1.88
COL6A5-205ENST00000512836 AKR1C1Q04828 323 aa3.31□□□□□ -1.88
COL6A5-205ENST00000512836 SPRNQ5BIV9 151 aa3.31□□□□□ -1.88
COL6A5-205ENST00000512836 OR4B1Q8NGF8 309 aa3.31□□□□□ -1.88
COL6A5-205ENST00000512836 SEC11CQ9BY50 192 aa3.31□□□□□ -1.88
COL6A5-205ENST00000512836 LINC00588Q9Y4M8 146 aa3.31□□□□□ -1.88
COL6A5-205ENST00000512836 ARHGEF17Q96PE2 2063 aaPredicted RBP3.31□□□□□ -1.88
COL6A5-205ENST00000512836 TRBV27A0A0K0K1C4 114 aa3.31□□□□□ -1.88
COL6A5-205ENST00000512836 NDUFC2-KCTD14E9PQ53 114 aa3.31□□□□□ -1.88
COL6A5-205ENST00000512836 J3QRE1 110 aa3.31□□□□□ -1.88
COL6A5-205ENST00000512836 BGLAPP02818 100 aa3.31□□□□□ -1.88
COL6A5-205ENST00000512836 SRP19P09132 144 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms