RNA–Protein interactions for RNA: ENST00000512836.5

COL6A5-205, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 2

Gene COL6A5, Length 3,138 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-205ENST00000512836 CHIC1Q5VXU3 224 aa10.02□□□□□ -0.8
COL6A5-205ENST00000512836 SLC24A1O60721 1099 aa10.01□□□□□ -0.81
COL6A5-205ENST00000512836 EHMT2Q96KQ7 1210 aa9.38□□□□□ -0.91
COL6A5-205ENST00000512836 AEBP2Q6ZN18 517 aaPredicted RBP9.36□□□□□ -0.91
COL6A5-205ENST00000512836 PLPPR3Q6T4P5 718 aa9.14□□□□□ -0.95
COL6A5-205ENST00000512836 RTN4Q9NQC3 1192 aaKnown RBP9.08□□□□□ -0.96
COL6A5-205ENST00000512836 PHF23Q9BUL5 403 aaPredicted RBP9.05□□□□□ -0.96
COL6A5-205ENST00000512836 DAXXQ9UER7 740 aaPredicted RBP9□□□□□ -0.97
COL6A5-205ENST00000512836 NCBP3Q53F19 620 aaKnown RBP8.98□□□□□ -0.97
COL6A5-205ENST00000512836 AMER1Q5JTC6 1135 aaPredicted RBP8.94□□□□□ -0.98
COL6A5-205ENST00000512836 CSRNP3Q8WYN3 585 aa8.88□□□□□ -0.99
COL6A5-205ENST00000512836 KCNA4P22459 653 aa8.86□□□□□ -0.99
COL6A5-205ENST00000512836 PRKCSHP14314 528 aaPredicted RBP8.6□□□□□ -1.03
COL6A5-205ENST00000512836 ARXQ96QS3 562 aa8.57□□□□□ -1.04
COL6A5-205ENST00000512836 TIMELESSQ9UNS1 1208 aa8.46□□□□□ -1.05
COL6A5-205ENST00000512836 APLP2Q06481 763 aa8.43□□□□□ -1.06
COL6A5-205ENST00000512836 TAOK2Q9UL54 1235 aa8.41□□□□□ -1.06
COL6A5-205ENST00000512836 SLC4A1APQ9BWU0 796 aaKnown RBP8.4□□□□□ -1.06
COL6A5-205ENST00000512836 TTBK1Q5TCY1 1321 aaPredicted RBP8.34□□□□□ -1.07
COL6A5-205ENST00000512836 BCANQ96GW7 911 aa8.31□□□□□ -1.08
COL6A5-205ENST00000512836 TULP1O00294 542 aaPredicted RBP8.29□□□□□ -1.08
COL6A5-205ENST00000512836 PELP1Q8IZL8 1130 aaKnown RBP8.25□□□□□ -1.09
COL6A5-205ENST00000512836 HOMEZQ8IX15 550 aa8.24□□□□□ -1.09
COL6A5-205ENST00000512836 PLCB2Q00722 1185 aa8.23□□□□□ -1.09
COL6A5-205ENST00000512836 TPRNQ4KMQ1 711 aa8.21□□□□□ -1.1
COL6A5-205ENST00000512836 ZBTB22O15209 634 aa8.16□□□□□ -1.1
COL6A5-205ENST00000512836 ERICH6Q7L0X2 663 aa8.15□□□□□ -1.1
COL6A5-205ENST00000512836 MYT1Q01538 1121 aa8.14□□□□□ -1.11
COL6A5-205ENST00000512836 RANGAP1P46060 587 aaPredicted RBP8.13□□□□□ -1.11
COL6A5-205ENST00000512836 GTF3C3Q9Y5Q9 886 aa8.09□□□□□ -1.11
COL6A5-205ENST00000512836 ADRA2BP18089 450 aa8.09□□□□□ -1.11
COL6A5-205ENST00000512836 KLHL34Q8N239 644 aa8.03□□□□□ -1.12
COL6A5-205ENST00000512836 HAP1P54257 671 aaPredicted RBP8.03□□□□□ -1.12
COL6A5-205ENST00000512836 PODXL2Q9NZ53 605 aa8□□□□□ -1.13
COL6A5-205ENST00000512836 VSIG10Q8N0Z9 540 aa7.97□□□□□ -1.13
COL6A5-205ENST00000512836 TMEM132AQ24JP5 1023 aa7.94□□□□□ -1.14
COL6A5-205ENST00000512836 KDM2AQ9Y2K7 1162 aa7.87□□□□□ -1.15
COL6A5-205ENST00000512836 FKBP8Q14318 412 aa7.86□□□□□ -1.15
COL6A5-205ENST00000512836 NPM3O75607 178 aaKnown RBP7.84□□□□□ -1.15
COL6A5-205ENST00000512836 NPM2Q86SE8 214 aaKnown RBP7.84□□□□□ -1.15
COL6A5-205ENST00000512836 C14orf37Q86TY3 774 aa7.79□□□□□ -1.16
COL6A5-205ENST00000512836 FBXO3Q9UK99 471 aa7.79□□□□□ -1.16
COL6A5-205ENST00000512836 EIF5BO60841 1220 aaKnown RBP7.77□□□□□ -1.17
COL6A5-205ENST00000512836 NISCHQ9Y2I1 1504 aa7.77□□□□□ -1.17
COL6A5-205ENST00000512836 FBLN2P98095 1184 aa7.75□□□□□ -1.17
COL6A5-205ENST00000512836 TRIM26Q12899 539 aaPredicted RBP7.73□□□□□ -1.17
COL6A5-205ENST00000512836 PPP4R3CPQ6ZMV5 832 aa7.67□□□□□ -1.18
COL6A5-205ENST00000512836 HRCP23327 699 aa7.67□□□□□ -1.18
COL6A5-205ENST00000512836 FOXD4L1Q9NU39 408 aa7.66□□□□□ -1.18
COL6A5-205ENST00000512836 PPP6R1Q9UPN7 881 aa7.63□□□□□ -1.19
COL6A5-205ENST00000512836 UBTFP17480 764 aaKnown RBP7.63□□□□□ -1.19
COL6A5-205ENST00000512836 SUPT5HO00267 1087 aaKnown RBP7.62□□□□□ -1.19
COL6A5-205ENST00000512836 SENP3Q9H4L4 574 aaPredicted RBP7.58□□□□□ -1.2
COL6A5-205ENST00000512836 LOC105371045A0A1W2PR82 267 aa7.58□□□□□ -1.2
COL6A5-205ENST00000512836 PLEKHG5O94827 1062 aa7.5□□□□□ -1.21
COL6A5-205ENST00000512836 DCAF8L2P0C7V8 631 aa7.48□□□□□ -1.21
COL6A5-205ENST00000512836 DNAJC5Q9H3Z4 198 aa7.45□□□□□ -1.22
COL6A5-205ENST00000512836 BBXQ8WY36 941 aaPredicted RBP7.44□□□□□ -1.22
COL6A5-205ENST00000512836 NBR1Q14596 966 aa7.43□□□□□ -1.22
COL6A5-205ENST00000512836 PAXIP1Q6ZW49 1069 aaPredicted RBP7.43□□□□□ -1.22
COL6A5-205ENST00000512836 TSHZ2Q9NRE2 1034 aa7.43□□□□□ -1.22
COL6A5-205ENST00000512836 PKD2Q13563 968 aa7.41□□□□□ -1.22
COL6A5-205ENST00000512836 NPM1P06748 294 aaKnown RBP eCLIP7.4□□□□□ -1.22
COL6A5-205ENST00000512836 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.4□□□□□ -1.23
COL6A5-205ENST00000512836 CFAP44Q96MT7 982 aa7.38□□□□□ -1.23
COL6A5-205ENST00000512836 DNAJC5BQ9UF47 199 aa7.37□□□□□ -1.23
COL6A5-205ENST00000512836 IGSF3O75054 1194 aa7.33□□□□□ -1.24
COL6A5-205ENST00000512836 SHROOM4Q9ULL8 1493 aa7.32□□□□□ -1.24
COL6A5-205ENST00000512836 CCDC9Q9Y3X0 531 aaKnown RBP7.32□□□□□ -1.24
COL6A5-205ENST00000512836 CNKSR2Q8WXI2 1034 aa7.3□□□□□ -1.24
COL6A5-205ENST00000512836 ATXN8OSP0DMR3 200 aa7.29□□□□□ -1.24
COL6A5-205ENST00000512836 CHMP4AQ9BY43 222 aa7.28□□□□□ -1.24
COL6A5-205ENST00000512836 SAMD1Q6SPF0 538 aaPredicted RBP7.27□□□□□ -1.24
COL6A5-205ENST00000512836 TRHP20396 242 aaPredicted RBP7.26□□□□□ -1.25
COL6A5-205ENST00000512836 BRPF1P55201 1214 aaPredicted RBP7.26□□□□□ -1.25
COL6A5-205ENST00000512836 SPRYD3Q8NCJ5 442 aa7.25□□□□□ -1.25
COL6A5-205ENST00000512836 CDK11BP21127 795 aaKnown RBP7.24□□□□□ -1.25
COL6A5-205ENST00000512836 IFNLR1Q8IU57 520 aaPredicted RBP7.24□□□□□ -1.25
COL6A5-205ENST00000512836 CDK11AQ9UQ88 783 aaPredicted RBP7.24□□□□□ -1.25
COL6A5-205ENST00000512836 NECTIN2Q92692 538 aa7.24□□□□□ -1.25
COL6A5-205ENST00000512836 PDIA4P13667 645 aaKnown RBP7.23□□□□□ -1.25
COL6A5-205ENST00000512836 HSP90B1P14625 803 aaKnown RBP7.21□□□□□ -1.26
COL6A5-205ENST00000512836 HMGB1P09429 215 aaKnown RBP7.2□□□□□ -1.26
COL6A5-205ENST00000512836 C1orf115Q9H7X2 142 aa7.19□□□□□ -1.26
COL6A5-205ENST00000512836 ZBTB7CA1YPR0 619 aa7.18□□□□□ -1.26
COL6A5-205ENST00000512836 VASPP50552 380 aaPredicted RBP7.18□□□□□ -1.26
COL6A5-205ENST00000512836 PUS7Q96PZ0 661 aaKnown RBP7.18□□□□□ -1.26
COL6A5-205ENST00000512836 ZMYND15Q9H091 742 aa7.16□□□□□ -1.26
COL6A5-205ENST00000512836 UBE2Q2Q8WVN8 375 aa7.15□□□□□ -1.26
COL6A5-205ENST00000512836 RSPH6AQ9H0K4 717 aa7.14□□□□□ -1.27
COL6A5-205ENST00000512836 ARID3AQ99856 593 aa7.12□□□□□ -1.27
COL6A5-205ENST00000512836 BRD2P25440 801 aaKnown RBP7.1□□□□□ -1.27
COL6A5-205ENST00000512836 RGS22Q8NE09 1264 aa7.09□□□□□ -1.27
COL6A5-205ENST00000512836 SLC4A2P04920 1241 aa7.09□□□□□ -1.27
COL6A5-205ENST00000512836 DHX37Q8IY37 1157 aaKnown RBP7.08□□□□□ -1.28
COL6A5-205ENST00000512836 RGL2O15211 777 aa7.05□□□□□ -1.28
COL6A5-205ENST00000512836 ECM2O94769 699 aaPredicted RBP7.04□□□□□ -1.28
COL6A5-205ENST00000512836 PROM2Q8N271 834 aa7.04□□□□□ -1.28
COL6A5-205ENST00000512836 FOXD1Q16676 465 aa7.03□□□□□ -1.28
COL6A5-205ENST00000512836 MYCNP04198 464 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms