RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 RAP2BP61225 183 aa8.53□□□□□ -1.04
DDX41-215ENST00000512431 DAZ2Q13117 558 aaKnown RBP8.53□□□□□ -1.04
DDX41-215ENST00000512431 TMEM229BQ8NBD8 167 aa8.53□□□□□ -1.04
DDX41-215ENST00000512431 OR52I2Q8NH67 350 aa8.53□□□□□ -1.04
DDX41-215ENST00000512431 NTN5Q8WTR8 489 aaPredicted RBP8.53□□□□□ -1.04
DDX41-215ENST00000512431 RPUSD4Q96CM3 377 aaKnown RBP8.53□□□□□ -1.04
DDX41-215ENST00000512431 MTFP1Q9UDX5 166 aa8.53□□□□□ -1.04
DDX41-215ENST00000512431 PAX4O43316 350 aa8.52□□□□□ -1.05
DDX41-215ENST00000512431 PSCAO43653 123 aa8.52□□□□□ -1.05
DDX41-215ENST00000512431 HPGDSO60760 199 aa8.52□□□□□ -1.05
DDX41-215ENST00000512431 EVI2AP22794 236 aa8.52□□□□□ -1.05
DDX41-215ENST00000512431 RPP30P78346 268 aaKnown RBP8.52□□□□□ -1.05
DDX41-215ENST00000512431 SURF2Q15527 256 aaPredicted RBP8.52□□□□□ -1.05
DDX41-215ENST00000512431 Q6ZTI0 123 aa8.52□□□□□ -1.05
DDX41-215ENST00000512431 S100A7AQ86SG5 101 aa8.52□□□□□ -1.05
DDX41-215ENST00000512431 CCDC190Q86UF4 302 aa8.52□□□□□ -1.05
DDX41-215ENST00000512431 YIPF6Q96EC8 236 aa8.52□□□□□ -1.05
DDX41-215ENST00000512431 HMCN2Q8NDA2 5059 aa8.52□□□□□ -1.05
DDX41-215ENST00000512431 DISC1C4P0D8 188 aa8.51□□□□□ -1.05
DDX41-215ENST00000512431 H3BRN7 92 aa8.51□□□□□ -1.05
DDX41-215ENST00000512431 GATA2P23769 480 aaPredicted RBP8.51□□□□□ -1.05
DDX41-215ENST00000512431 GFI1BQ5VTD9 330 aa8.51□□□□□ -1.05
DDX41-215ENST00000512431 LYPD5Q6UWN5 251 aa8.51□□□□□ -1.05
DDX41-215ENST00000512431 C15orf40Q8WUR7 153 aa8.51□□□□□ -1.05
DDX41-215ENST00000512431 HIGD1AQ9Y241 93 aa8.51□□□□□ -1.05
DDX41-215ENST00000512431 A0A087X0K7 114 aa8.5□□□□□ -1.05
DDX41-215ENST00000512431 A0A0B4J2A0 478 aa8.5□□□□□ -1.05
DDX41-215ENST00000512431 ZNF324O75467 553 aaPredicted RBP8.5□□□□□ -1.05
DDX41-215ENST00000512431 ANXA7P20073 488 aaKnown RBP8.5□□□□□ -1.05
DDX41-215ENST00000512431 AKR1C1Q04828 323 aa8.5□□□□□ -1.05
DDX41-215ENST00000512431 KIR3DS1Q14943 382 aa8.5□□□□□ -1.05
DDX41-215ENST00000512431 PYGO2Q9BRQ0 406 aa8.5□□□□□ -1.05
DDX41-215ENST00000512431 LINC00467Q9BRT7 94 aa8.5□□□□□ -1.05
DDX41-215ENST00000512431 SHANK2-AS3Q9BTD1 123 aa8.5□□□□□ -1.05
DDX41-215ENST00000512431 MRPS26Q9BYN8 205 aaKnown RBP8.5□□□□□ -1.05
DDX41-215ENST00000512431 NAA50Q9GZZ1 169 aaKnown RBP8.5□□□□□ -1.05
DDX41-215ENST00000512431 SHPKQ9UHJ6 478 aa8.5□□□□□ -1.05
DDX41-215ENST00000512431 GPR132Q9UNW8 380 aa8.5□□□□□ -1.05
DDX41-215ENST00000512431 RNF24Q9Y225 148 aa8.5□□□□□ -1.05
DDX41-215ENST00000512431 FUT9Q9Y231 359 aa8.5□□□□□ -1.05
DDX41-215ENST00000512431 TRGV1A0A0A0MS02 117 aa8.49□□□□□ -1.05
DDX41-215ENST00000512431 TRAV12-3A0A0B4J271 114 aa8.49□□□□□ -1.05
DDX41-215ENST00000512431 PIGBOS1A0A0B4J2F0 54 aa8.49□□□□□ -1.05
DDX41-215ENST00000512431 J3KRW8 73 aa8.49□□□□□ -1.05
DDX41-215ENST00000512431 HYPMO75409 117 aa8.49□□□□□ -1.05
DDX41-215ENST00000512431 IL5P05113 134 aa8.49□□□□□ -1.05
DDX41-215ENST00000512431 OR5G3P0C626 314 aa8.49□□□□□ -1.05
DDX41-215ENST00000512431 PRB4P10163 310 aaPredicted RBP8.49□□□□□ -1.05
DDX41-215ENST00000512431 IAPPP10997 89 aa8.49□□□□□ -1.05
DDX41-215ENST00000512431 SLAQ13239 276 aa8.49□□□□□ -1.05
DDX41-215ENST00000512431 MRPL23Q16540 153 aaKnown RBP8.49□□□□□ -1.05
DDX41-215ENST00000512431 MZT2AQ6P582 158 aa8.49□□□□□ -1.05
DDX41-215ENST00000512431 TMEM182Q6ZP80 229 aaPredicted RBP8.49□□□□□ -1.05
DDX41-215ENST00000512431 NEGR1Q7Z3B1 354 aa8.49□□□□□ -1.05
DDX41-215ENST00000512431 LYZL2Q7Z4W2 148 aa8.49□□□□□ -1.05
DDX41-215ENST00000512431 PARD6GQ9BYG4 376 aaPredicted RBP8.49□□□□□ -1.05
DDX41-215ENST00000512431 PRR13Q9NZ81 148 aa8.49□□□□□ -1.05
DDX41-215ENST00000512431 PRO0255Q9UI72 69 aa8.49□□□□□ -1.05
DDX41-215ENST00000512431 MED6O75586 246 aa8.48□□□□□ -1.05
DDX41-215ENST00000512431 C1QBP02746 253 aa8.48□□□□□ -1.05
DDX41-215ENST00000512431 ANXA3P12429 323 aa8.48□□□□□ -1.05
DDX41-215ENST00000512431 CXCL2P19875 107 aa8.48□□□□□ -1.05
DDX41-215ENST00000512431 LEPP41159 167 aa8.48□□□□□ -1.05
DDX41-215ENST00000512431 SRPXP78539 464 aa8.48□□□□□ -1.05
DDX41-215ENST00000512431 FAAP20Q6NZ36 180 aa8.48□□□□□ -1.05
DDX41-215ENST00000512431 LINC00528Q8N1L1 170 aa8.48□□□□□ -1.05
DDX41-215ENST00000512431 C10orf126Q8N4M7 172 aa8.48□□□□□ -1.05
DDX41-215ENST00000512431 ZNF680Q8NEM1 530 aa8.48□□□□□ -1.05
DDX41-215ENST00000512431 CIB3Q96Q77 187 aaPredicted RBP8.48□□□□□ -1.05
DDX41-215ENST00000512431 SLC50A1Q9BRV3 221 aa8.48□□□□□ -1.05
DDX41-215ENST00000512431 EXTL2Q9UBQ6 330 aa8.48□□□□□ -1.05
DDX41-215ENST00000512431 OXTP01178 125 aa8.47□□□□□ -1.05
DDX41-215ENST00000512431 LCN15Q6UWW0 184 aa8.47□□□□□ -1.05
DDX41-215ENST00000512431 CYP2G1PQ6ZSU1 146 aa8.47□□□□□ -1.05
DDX41-215ENST00000512431 SCGB3A2Q96PL1 93 aa8.47□□□□□ -1.05
DDX41-215ENST00000512431 PRRT1Q99946 306 aa8.47□□□□□ -1.05
DDX41-215ENST00000512431 FUNDC2Q9BWH2 189 aa8.47□□□□□ -1.05
DDX41-215ENST00000512431 GSN-AS1Q9NRJ2 163 aa8.47□□□□□ -1.05
DDX41-215ENST00000512431 FAM30AQ9NZY2 134 aa8.47□□□□□ -1.05
DDX41-215ENST00000512431 HHLA3Q9XRX5 114 aa8.47□□□□□ -1.05
DDX41-215ENST00000512431 PMS2P5A8MQ11 134 aa8.46□□□□□ -1.06
DDX41-215ENST00000512431 CRYGDP07320 174 aa8.46□□□□□ -1.06
DDX41-215ENST00000512431 SSBP1Q04837 148 aaKnown RBP8.46□□□□□ -1.06
DDX41-215ENST00000512431 ZBTB8BQ8NAP8 495 aaPredicted RBP8.46□□□□□ -1.06
DDX41-215ENST00000512431 AP3S1Q92572 193 aa8.46□□□□□ -1.06
DDX41-215ENST00000512431 ST6GAL2Q96JF0 529 aa8.46□□□□□ -1.06
DDX41-215ENST00000512431 VCX3AQ9NNX9 186 aa8.46□□□□□ -1.06
DDX41-215ENST00000512431 ZNF331Q9NQX6 463 aaPredicted RBP8.46□□□□□ -1.06
DDX41-215ENST00000512431 SMCO3A2RU48 225 aa8.45□□□□□ -1.06
DDX41-215ENST00000512431 LRCOL1A6NCL2 159 aa8.45□□□□□ -1.06
DDX41-215ENST00000512431 PRAF2O60831 178 aa8.45□□□□□ -1.06
DDX41-215ENST00000512431 IGHV3-53P01767 116 aa8.45□□□□□ -1.06
DDX41-215ENST00000512431 LINC00869P0C866 280 aa8.45□□□□□ -1.06
DDX41-215ENST00000512431 AKAIN1P0CW23 69 aa8.45□□□□□ -1.06
DDX41-215ENST00000512431 CRYBA4P53673 196 aa8.45□□□□□ -1.06
DDX41-215ENST00000512431 NCS1P62166 190 aa8.45□□□□□ -1.06
DDX41-215ENST00000512431 SELENOTP62341 195 aa8.45□□□□□ -1.06
DDX41-215ENST00000512431 CTF1Q16619 201 aa8.45□□□□□ -1.06
DDX41-215ENST00000512431 ACOT7LQ6ZUV0 252 aa8.45□□□□□ -1.06
DDX41-215ENST00000512431 WFDC10BQ8IUB3 73 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms