RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 A0A087X0K7 114 aa12.84□□□□□ -0.35
HMGCS1-206ENST00000511774 A0A0B4J2A0 478 aa12.84□□□□□ -0.35
HMGCS1-206ENST00000511774 PRAC2D3DTV9 90 aa12.84□□□□□ -0.35
HMGCS1-206ENST00000511774 PITX3O75364 302 aa12.84□□□□□ -0.35
HMGCS1-206ENST00000511774 VBP1P61758 197 aa12.84□□□□□ -0.35
HMGCS1-206ENST00000511774 TMEM70Q9BUB7 260 aa12.84□□□□□ -0.35
HMGCS1-206ENST00000511774 SHPKQ9UHJ6 478 aa12.84□□□□□ -0.35
HMGCS1-206ENST00000511774 SNURFLB1AK76 121 aa12.83□□□□□ -0.36
HMGCS1-206ENST00000511774 SNRPCP09234 159 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-206ENST00000511774 NFE4Q86UQ8 179 aa12.83□□□□□ -0.36
HMGCS1-206ENST00000511774 OR1S1Q8NH92 325 aa12.83□□□□□ -0.36
HMGCS1-206ENST00000511774 C20orf144Q9BQM9 153 aa12.83□□□□□ -0.36
HMGCS1-206ENST00000511774 MRPS12O15235 138 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-206ENST00000511774 DAZ2Q13117 558 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-206ENST00000511774 CCDC28AQ8IWP9 274 aa12.82□□□□□ -0.36
HMGCS1-206ENST00000511774 LINC00854A0A1B0GVQ3 168 aa12.81□□□□□ -0.36
HMGCS1-206ENST00000511774 J3KRW8 73 aa12.81□□□□□ -0.36
HMGCS1-206ENST00000511774 RPL7P18124 248 aaKnown RBP12.81□□□□□ -0.36
HMGCS1-206ENST00000511774 RAB11AP62491 216 aa12.81□□□□□ -0.36
HMGCS1-206ENST00000511774 ZBTB8BQ8NAP8 495 aaPredicted RBP12.81□□□□□ -0.36
HMGCS1-206ENST00000511774 SERTAD4-AS1Q5TG53 156 aa12.8□□□□□ -0.36
HMGCS1-206ENST00000511774 LYPD5Q6UWN5 251 aa12.8□□□□□ -0.36
HMGCS1-206ENST00000511774 C11orf72Q8NBR9 251 aa12.8□□□□□ -0.36
HMGCS1-206ENST00000511774 OR51S1Q8NGJ8 323 aa12.8□□□□□ -0.36
HMGCS1-206ENST00000511774 Q9H521 79 aa12.8□□□□□ -0.36
HMGCS1-206ENST00000511774 GSN-AS1Q9NRJ2 163 aa12.8□□□□□ -0.36
HMGCS1-206ENST00000511774 MSRB1Q9NZV6 116 aa12.8□□□□□ -0.36
HMGCS1-206ENST00000511774 HIGD1AQ9Y241 93 aa12.8□□□□□ -0.36
HMGCS1-206ENST00000511774 TRAV12-3A0A0B4J271 114 aa12.79□□□□□ -0.36
HMGCS1-206ENST00000511774 LRCOL1A6NCL2 159 aa12.79□□□□□ -0.36
HMGCS1-206ENST00000511774 PATE2Q6UY27 113 aa12.79□□□□□ -0.36
HMGCS1-206ENST00000511774 ACOT7LQ6ZUV0 252 aa12.79□□□□□ -0.36
HMGCS1-206ENST00000511774 CCDC190Q86UF4 302 aa12.79□□□□□ -0.36
HMGCS1-206ENST00000511774 WFDC10BQ8IUB3 73 aa12.79□□□□□ -0.36
HMGCS1-206ENST00000511774 LINC00467Q9BRT7 94 aa12.79□□□□□ -0.36
HMGCS1-206ENST00000511774 MIXL1Q9H2W2 232 aa12.79□□□□□ -0.36
HMGCS1-206ENST00000511774 ICOSQ9Y6W8 199 aa12.79□□□□□ -0.36
HMGCS1-206ENST00000511774 TRGV2A0A075B6R0 118 aa12.78□□□□□ -0.36
HMGCS1-206ENST00000511774 IGLV5-52A0A0A0MRZ9 124 aa12.78□□□□□ -0.36
HMGCS1-206ENST00000511774 PMS2P5A8MQ11 134 aa12.78□□□□□ -0.36
HMGCS1-206ENST00000511774 DISC1C4P0D8 188 aa12.78□□□□□ -0.36
HMGCS1-206ENST00000511774 ZNF324O75467 553 aaPredicted RBP12.78□□□□□ -0.36
HMGCS1-206ENST00000511774 CT45A10P0DMU9 189 aa12.78□□□□□ -0.36
HMGCS1-206ENST00000511774 AKR1C4P17516 323 aa12.78□□□□□ -0.36
HMGCS1-206ENST00000511774 AKR1C1Q04828 323 aa12.78□□□□□ -0.36
HMGCS1-206ENST00000511774 CYP2G1PQ6ZSU1 146 aa12.78□□□□□ -0.36
HMGCS1-206ENST00000511774 FUNDC2Q9BWH2 189 aa12.78□□□□□ -0.36
HMGCS1-206ENST00000511774 ZNF331Q9NQX6 463 aaPredicted RBP12.78□□□□□ -0.36
HMGCS1-206ENST00000511774 FUT9Q9Y231 359 aa12.78□□□□□ -0.36
HMGCS1-206ENST00000511774 KCNIP3Q9Y2W7 256 aa12.78□□□□□ -0.36
HMGCS1-206ENST00000511774 H3BTX0 84 aa12.77□□□□□ -0.37
HMGCS1-206ENST00000511774 SLC17A3O00476 420 aa12.77□□□□□ -0.37
HMGCS1-206ENST00000511774 PAX4O43316 350 aa12.77□□□□□ -0.37
HMGCS1-206ENST00000511774 HYPMO75409 117 aa12.77□□□□□ -0.37
HMGCS1-206ENST00000511774 PLP1P60201 277 aa12.77□□□□□ -0.37
HMGCS1-206ENST00000511774 LRRC20Q8TCA0 184 aa12.77□□□□□ -0.37
HMGCS1-206ENST00000511774 ZNF431Q8TF32 576 aaPredicted RBP12.77□□□□□ -0.37
HMGCS1-206ENST00000511774 TRGV1A0A0A0MS02 117 aa12.76□□□□□ -0.37
HMGCS1-206ENST00000511774 H3BP45 60 aa12.76□□□□□ -0.37
HMGCS1-206ENST00000511774 IGHV3-53P01767 116 aa12.76□□□□□ -0.37
HMGCS1-206ENST00000511774 OR5G3P0C626 314 aa12.76□□□□□ -0.37
HMGCS1-206ENST00000511774 LINC00869P0C866 280 aa12.76□□□□□ -0.37
HMGCS1-206ENST00000511774 RAP2BP61225 183 aa12.76□□□□□ -0.37
HMGCS1-206ENST00000511774 MZT2AQ6P582 158 aa12.76□□□□□ -0.37
HMGCS1-206ENST00000511774 KLF12Q9Y4X4 402 aa12.76□□□□□ -0.37
HMGCS1-206ENST00000511774 LY96Q9Y6Y9 160 aa12.76□□□□□ -0.37
HMGCS1-206ENST00000511774 NPIPB6E9PJ23 425 aa12.75□□□□□ -0.37
HMGCS1-206ENST00000511774 WRBO00258 174 aa12.75□□□□□ -0.37
HMGCS1-206ENST00000511774 IL5P05113 134 aa12.75□□□□□ -0.37
HMGCS1-206ENST00000511774 AKAIN1P0CW23 69 aa12.75□□□□□ -0.37
HMGCS1-206ENST00000511774 SSBP1Q04837 148 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-206ENST00000511774 TEPPQ6URK8 271 aa12.75□□□□□ -0.37
HMGCS1-206ENST00000511774 PKHD1L1Q86WI1 4243 aa12.75□□□□□ -0.37
HMGCS1-206ENST00000511774 SPANXN5Q5MJ07 72 aa12.74□□□□□ -0.37
HMGCS1-206ENST00000511774 CLVS1Q8IUQ0 354 aaPredicted RBP12.74□□□□□ -0.37
HMGCS1-206ENST00000511774 LINC00528Q8N1L1 170 aa12.74□□□□□ -0.37
HMGCS1-206ENST00000511774 SYT8Q8NBV8 401 aa12.74□□□□□ -0.37
HMGCS1-206ENST00000511774 SMIM4Q8WVI0 70 aa12.74□□□□□ -0.37
HMGCS1-206ENST00000511774 PRRT1Q99946 306 aa12.74□□□□□ -0.37
HMGCS1-206ENST00000511774 PYGO2Q9BRQ0 406 aa12.74□□□□□ -0.37
HMGCS1-206ENST00000511774 NAA50Q9GZZ1 169 aaKnown RBP12.74□□□□□ -0.37
HMGCS1-206ENST00000511774 SPINK4O60575 86 aa12.73□□□□□ -0.37
HMGCS1-206ENST00000511774 PRAF2O60831 178 aa12.73□□□□□ -0.37
HMGCS1-206ENST00000511774 ATP6V1G2O95670 118 aa12.73□□□□□ -0.37
HMGCS1-206ENST00000511774 S100A7P31151 101 aa12.73□□□□□ -0.37
HMGCS1-206ENST00000511774 CRYBA4P53673 196 aa12.73□□□□□ -0.37
HMGCS1-206ENST00000511774 C8orf49Q96NF6 230 aa12.73□□□□□ -0.37
HMGCS1-206ENST00000511774 PLA2G2DQ9UNK4 145 aa12.73□□□□□ -0.37
HMGCS1-206ENST00000511774 TRAV9-2A0A087WT02 112 aa12.72□□□□□ -0.37
HMGCS1-206ENST00000511774 SYNGR2O43760 224 aa12.72□□□□□ -0.37
HMGCS1-206ENST00000511774 CCNKO75909 580 aa12.72□□□□□ -0.37
HMGCS1-206ENST00000511774 PLA2G1BP04054 148 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-206ENST00000511774 KRTAP10-4P60372 401 aaPredicted RBP12.72□□□□□ -0.37
HMGCS1-206ENST00000511774 FHL2Q14192 279 aa12.72□□□□□ -0.37
HMGCS1-206ENST00000511774 MORN5Q5VZ52 161 aa12.72□□□□□ -0.37
HMGCS1-206ENST00000511774 LCN15Q6UWW0 184 aa12.72□□□□□ -0.37
HMGCS1-206ENST00000511774 DEFB104AQ8WTQ1 72 aa12.72□□□□□ -0.37
HMGCS1-206ENST00000511774 ST6GAL2Q96JF0 529 aa12.72□□□□□ -0.37
HMGCS1-206ENST00000511774 ARL6Q9H0F7 186 aa12.72□□□□□ -0.37
HMGCS1-206ENST00000511774 SMCO3A2RU48 225 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms