RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 LINC00527Q9UJ94 153 aa12.78□□□□□ -0.36
CXCL3-204ENST00000511669 IZUMO1RA6ND01 250 aa12.77□□□□□ -0.36
CXCL3-204ENST00000511669 A8MWL6 223 aa12.77□□□□□ -0.36
CXCL3-204ENST00000511669 DIRC3C9JPN6 131 aa12.77□□□□□ -0.36
CXCL3-204ENST00000511669 NDUFA4O00483 81 aa12.77□□□□□ -0.36
CXCL3-204ENST00000511669 PSG3Q16557 428 aa12.77□□□□□ -0.36
CXCL3-204ENST00000511669 PRNTQ86SH4 94 aa12.77□□□□□ -0.36
CXCL3-204ENST00000511669 MAPK1IP1LQ8NDC0 245 aa12.77□□□□□ -0.36
CXCL3-204ENST00000511669 NUDT10Q8NFP7 164 aa12.77□□□□□ -0.36
CXCL3-204ENST00000511669 OR4B1Q8NGF8 309 aa12.77□□□□□ -0.36
CXCL3-204ENST00000511669 NUDT11Q96G61 164 aa12.77□□□□□ -0.36
CXCL3-204ENST00000511669 CLEC5AQ9NY25 188 aa12.77□□□□□ -0.36
CXCL3-204ENST00000511669 NAT8BQ9UHF3 227 aa12.77□□□□□ -0.36
CXCL3-204ENST00000511669 VPREB3Q9UKI3 123 aa12.77□□□□□ -0.36
CXCL3-204ENST00000511669 SOX21Q9Y651 276 aaPredicted RBP12.77□□□□□ -0.36
CXCL3-204ENST00000511669 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.77□□□□□ -0.37
CXCL3-204ENST00000511669 PHOX2AO14813 284 aa12.77□□□□□ -0.37
CXCL3-204ENST00000511669 BUB3O43684 328 aa12.77□□□□□ -0.37
CXCL3-204ENST00000511669 IGHV4-59P01825 116 aa12.77□□□□□ -0.37
CXCL3-204ENST00000511669 RPL15P61313 204 aaKnown RBP12.77□□□□□ -0.37
CXCL3-204ENST00000511669 BLCAPP62952 87 aa12.77□□□□□ -0.37
CXCL3-204ENST00000511669 GBGT1Q8N5D6 347 aa12.77□□□□□ -0.37
CXCL3-204ENST00000511669 TSKUQ8WUA8 353 aa12.77□□□□□ -0.37
CXCL3-204ENST00000511669 GNB1LQ9BYB4 327 aa12.77□□□□□ -0.37
CXCL3-204ENST00000511669 RPP21Q9H633 154 aaKnown RBP12.77□□□□□ -0.37
CXCL3-204ENST00000511669 IGHV3-35A0A0C4DH35 117 aa12.76□□□□□ -0.37
CXCL3-204ENST00000511669 CT45A10P0DMU9 189 aa12.76□□□□□ -0.37
CXCL3-204ENST00000511669 Q6YL49 198 aa12.76□□□□□ -0.37
CXCL3-204ENST00000511669 C17orf77Q96MU5 243 aa12.76□□□□□ -0.37
CXCL3-204ENST00000511669 PRSS22Q9GZN4 317 aa12.76□□□□□ -0.37
CXCL3-204ENST00000511669 ZNF331Q9NQX6 463 aaPredicted RBP12.76□□□□□ -0.37
CXCL3-204ENST00000511669 PSG8Q9UQ74 426 aa12.76□□□□□ -0.37
CXCL3-204ENST00000511669 ABCA1O95477 2261 aa12.76□□□□□ -0.37
CXCL3-204ENST00000511669 COL12A1Q99715 3063 aa12.75□□□□□ -0.37
CXCL3-204ENST00000511669 A0A1W2PS18 150 aa12.75□□□□□ -0.37
CXCL3-204ENST00000511669 IGLV1-40P01703 118 aa12.75□□□□□ -0.37
CXCL3-204ENST00000511669 SLC35B1P78383 322 aa12.75□□□□□ -0.37
CXCL3-204ENST00000511669 SAPCD1Q5SSQ6 148 aa12.75□□□□□ -0.37
CXCL3-204ENST00000511669 LINC00518Q8N0U6 118 aa12.75□□□□□ -0.37
CXCL3-204ENST00000511669 NOL4LQ96MY1 436 aaPredicted RBP12.75□□□□□ -0.37
CXCL3-204ENST00000511669 NPFFR1Q9GZQ6 430 aa12.75□□□□□ -0.37
CXCL3-204ENST00000511669 ANKRD17O75179 2603 aaKnown RBP12.74□□□□□ -0.37
CXCL3-204ENST00000511669 XKRY2A2RUG3 117 aa12.74□□□□□ -0.37
CXCL3-204ENST00000511669 FAM231BA6NCW3 169 aa12.74□□□□□ -0.37
CXCL3-204ENST00000511669 HLA-DQA1P01909 254 aa12.74□□□□□ -0.37
CXCL3-204ENST00000511669 SMIM6P0DI80 62 aa12.74□□□□□ -0.37
CXCL3-204ENST00000511669 BCL6BQ8N143 479 aaPredicted RBP12.74□□□□□ -0.37
CXCL3-204ENST00000511669 SGK494Q96LW2 274 aa12.74□□□□□ -0.37
CXCL3-204ENST00000511669 GFRA4Q9GZZ7 299 aa12.74□□□□□ -0.37
CXCL3-204ENST00000511669 CR1P17927 2039 aa12.74□□□□□ -0.37
CXCL3-204ENST00000511669 SPG11Q96JI7 2443 aa12.73□□□□□ -0.37
CXCL3-204ENST00000511669 SNURFLB1AK76 121 aa12.73□□□□□ -0.37
CXCL3-204ENST00000511669 ATP5L2Q7Z4Y8 100 aa12.73□□□□□ -0.37
CXCL3-204ENST00000511669 NDFIP1Q9BT67 221 aa12.73□□□□□ -0.37
CXCL3-204ENST00000511669 TCL1AP56279 114 aa12.73□□□□□ -0.37
CXCL3-204ENST00000511669 COA6Q5JTJ3 125 aaKnown RBP12.73□□□□□ -0.37
CXCL3-204ENST00000511669 CIARTQ8N365 385 aaPredicted RBP12.73□□□□□ -0.37
CXCL3-204ENST00000511669 OR4X2Q8NGF9 303 aa12.73□□□□□ -0.37
CXCL3-204ENST00000511669 MRPL53Q96EL3 112 aaKnown RBP12.73□□□□□ -0.37
CXCL3-204ENST00000511669 PSMG3-AS1Q96PY0 264 aa12.73□□□□□ -0.37
CXCL3-204ENST00000511669 MRPL18Q9H0U6 180 aaKnown RBP12.73□□□□□ -0.37
CXCL3-204ENST00000511669 U3KQE9 123 aa12.73□□□□□ -0.37
CXCL3-204ENST00000511669 C19orf71A6NCJ1 209 aa12.72□□□□□ -0.37
CXCL3-204ENST00000511669 IGLV2-11P01706 119 aa12.72□□□□□ -0.37
CXCL3-204ENST00000511669 IGHG4P01861 327 aa12.72□□□□□ -0.37
CXCL3-204ENST00000511669 BMI1P35226 326 aa12.72□□□□□ -0.37
CXCL3-204ENST00000511669 CFHR3Q02985 330 aa12.72□□□□□ -0.37
CXCL3-204ENST00000511669 WIPF2Q8TF74 440 aaPredicted RBP12.72□□□□□ -0.37
CXCL3-204ENST00000511669 PRDM13Q9H4Q3 707 aa12.72□□□□□ -0.37
CXCL3-204ENST00000511669 PRRC2AP48634 2157 aaKnown RBP12.71□□□□□ -0.37
CXCL3-204ENST00000511669 IGHV3OR16-8A0A075B7F1 116 aa12.71□□□□□ -0.37
CXCL3-204ENST00000511669 TRAV8-1A0A0A6YYK1 113 aa12.71□□□□□ -0.37
CXCL3-204ENST00000511669 CLPSL1A2RUU4 121 aa12.71□□□□□ -0.37
CXCL3-204ENST00000511669 RAB4BP61018 213 aa12.71□□□□□ -0.37
CXCL3-204ENST00000511669 HIST3H2BBQ8N257 126 aa12.71□□□□□ -0.37
CXCL3-204ENST00000511669 SMAD5-AS1Q9Y6J3 95 aa12.71□□□□□ -0.37
CXCL3-204ENST00000511669 RBAKDNA6NC62 111 aa12.7□□□□□ -0.38
CXCL3-204ENST00000511669 M0R3E3 92 aa12.7□□□□□ -0.38
CXCL3-204ENST00000511669 CHEK1O14757 476 aa12.7□□□□□ -0.38
CXCL3-204ENST00000511669 CBLN1P23435 193 aa12.7□□□□□ -0.38
CXCL3-204ENST00000511669 FAM106AQ4KMX7 169 aa12.7□□□□□ -0.38
CXCL3-204ENST00000511669 C16orf54Q6UWD8 224 aa12.7□□□□□ -0.38
CXCL3-204ENST00000511669 HIGD1CA8MV81 97 aa12.7□□□□□ -0.38
CXCL3-204ENST00000511669 NPIPB6E9PJ23 425 aa12.7□□□□□ -0.38
CXCL3-204ENST00000511669 Q6AWC8 147 aa12.7□□□□□ -0.38
CXCL3-204ENST00000511669 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.7□□□□□ -0.38
CXCL3-204ENST00000511669 KRTAP1-3Q8IUG1 177 aa12.7□□□□□ -0.38
CXCL3-204ENST00000511669 NEU1Q99519 415 aa12.7□□□□□ -0.38
CXCL3-204ENST00000511669 C12orf57Q99622 126 aa12.7□□□□□ -0.38
CXCL3-204ENST00000511669 PEF1Q9UBV8 284 aaKnown RBP12.7□□□□□ -0.38
CXCL3-204ENST00000511669 LCN12Q6JVE5 192 aa12.69□□□□□ -0.38
CXCL3-204ENST00000511669 MRPL54Q6P161 138 aaKnown RBP12.69□□□□□ -0.38
CXCL3-204ENST00000511669 RBPMS2Q6ZRY4 209 aaKnown RBP12.69□□□□□ -0.38
CXCL3-204ENST00000511669 TMEM86BQ8N661 226 aa12.69□□□□□ -0.38
CXCL3-204ENST00000511669 NUP35Q8NFH5 326 aa12.69□□□□□ -0.38
CXCL3-204ENST00000511669 OR2D3Q8NGH3 330 aa12.69□□□□□ -0.38
CXCL3-204ENST00000511669 LRRK2Q5S007 2527 aa12.69□□□□□ -0.38
CXCL3-204ENST00000511669 CA1P00915 261 aaPredicted RBP12.68□□□□□ -0.38
CXCL3-204ENST00000511669 IGHV3-11P01762 117 aa12.68□□□□□ -0.38
CXCL3-204ENST00000511669 ELANEP08246 267 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms