RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 ZNF835Q9Y2P0 537 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 TRAPPC1Q9Y5R8 145 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 PAPPA2Q9BXP8 1791 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 FAM208BQ5VWN6 2430 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 BRCA1P38398 1863 aaKnown RBP3.9□□□□□ -1.78
NUP54-210ENST00000510884 MON2Q7Z3U7 1717 aa3.9□□□□□ -1.78
NUP54-210ENST00000510884 LOC107986453A0A1B0GWG9 222 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 ZNF727A8MUV8 499 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 ATOX1O00244 68 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 PGLYRP1O75594 196 aaPredicted RBP3.9□□□□□ -1.79
NUP54-210ENST00000510884 CST7O76096 145 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 ATP1B1P05026 303 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 IGKV5-2P06315 115 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 IL3RAP26951 378 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 HLA-DMBP28068 263 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 ATP5EP56381 51 aaPredicted RBP3.9□□□□□ -1.79
NUP54-210ENST00000510884 DAZ2Q13117 558 aaKnown RBP3.9□□□□□ -1.79
NUP54-210ENST00000510884 MS4A13Q5J8X5 152 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 IGFL2Q6UWQ7 119 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 ZNF493Q6ZR52 646 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 KRTAP5-5Q701N2 237 aaPredicted RBP3.9□□□□□ -1.79
NUP54-210ENST00000510884 DAZ4Q86SG3 579 aaKnown RBP3.9□□□□□ -1.79
NUP54-210ENST00000510884 BAGE3Q86Y29 109 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 BAGE2Q86Y30 109 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 LINC01561Q8N1V8 128 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 STAG3L4Q8TBR4 150 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 IGF2BP2-AS1Q96M15 143 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 AICDAQ9GZX7 198 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 CXXC4Q9H2H0 198 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 PLEKHF2Q9H8W4 249 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 NRN1Q9NPD7 142 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 DAZ3Q9NR90 486 aaKnown RBP3.9□□□□□ -1.79
NUP54-210ENST00000510884 PCTPQ9UKL6 214 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 DNAJC15Q9Y5T4 150 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 ARID2Q68CP9 1835 aa3.9□□□□□ -1.79
NUP54-210ENST00000510884 KIAA0100Q14667 2235 aaKnown RBP3.89□□□□□ -1.79
NUP54-210ENST00000510884 FBN3Q75N90 2809 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 IGHV4-30-2A0A087WSY4 118 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 NDUFS5O43920 106 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 ZNF324O75467 553 aaPredicted RBP3.89□□□□□ -1.79
NUP54-210ENST00000510884 IGHV3-7P01780 117 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 CBLN1P23435 193 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 MPV17P39210 176 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 PPICP45877 212 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 RPS11P62280 158 aaKnown RBP eCLIP3.89□□□□□ -1.79
NUP54-210ENST00000510884 SNRPGP62308 76 aaKnown RBP3.89□□□□□ -1.79
NUP54-210ENST00000510884 GNB2P62879 340 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 SRSF9Q13242 221 aaKnown RBP eCLIP3.89□□□□□ -1.79
NUP54-210ENST00000510884 IGFBP7Q16270 282 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 LRRC37A5PQ49AS3 106 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 ZCCHC23Q6ZST2 131 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 CYP2G1PQ6ZSU1 146 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 GVQW1Q8N7I0 195 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 DCAF4L2Q8NA75 395 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 SSC4DQ8WTU2 575 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 BRK1Q8WUW1 75 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 GTSF1Q8WW33 167 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 NABP1Q96AH0 204 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 CNRIP1Q96F85 164 aaPredicted RBP3.89□□□□□ -1.79
NUP54-210ENST00000510884 GPX7Q96SL4 187 aaPredicted RBP3.89□□□□□ -1.79
NUP54-210ENST00000510884 PRSS27Q9BQR3 290 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 SHANK2-AS3Q9BTD1 123 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 FAM60AQ9NP50 221 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 VSIG4Q9Y279 399 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 ZNF256Q9Y2P7 627 aaPredicted RBP3.89□□□□□ -1.79
NUP54-210ENST00000510884 AMMECR1Q9Y4X0 333 aaPredicted RBP3.89□□□□□ -1.79
NUP54-210ENST00000510884 TMEM131Q92545 1883 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 MYO18BQ8IUG5 2567 aa3.89□□□□□ -1.79
NUP54-210ENST00000510884 TEP1Q99973 2627 aaKnown RBP3.88□□□□□ -1.79
NUP54-210ENST00000510884 TRAV1-1A0A0B4J248 108 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 A0A0J9YW62 118 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 PLAC8L1A1L4L8 177 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 OOSP1A8MZH6 123 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 ZNF736B4DX44 427 aaPredicted RBP3.88□□□□□ -1.79
NUP54-210ENST00000510884 FXYD1O00168 92 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 LGALS9O00182 355 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 NDUFB3O43676 98 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 PRH1P02810 166 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 COX8AP10176 69 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 SAA4P35542 130 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 UBE2G1P62253 170 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 CST6Q15828 149 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 LGALS9BQ3B8N2 356 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 FHL5Q5TD97 284 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 C1orf140Q5VVS0 124 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 LINC00305Q7Z4B0 112 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 AMN1Q8IY45 258 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 CYB561D1Q8N8Q1 229 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 LY6G5BQ8NDX9 201 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 LMX1AQ8TE12 382 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 TMEM230Q96A57 120 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 CARD19Q96LW7 228 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 METTL26Q96S19 204 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 AMELYQ99218 206 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 PLA2G2FQ9BZM2 168 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 TNFRSF19Q9NS68 423 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 ZNF581Q9P0T4 197 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 HES2Q9Y543 173 aa3.88□□□□□ -1.79
NUP54-210ENST00000510884 SCN1AP35498 2009 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 MYO15AQ9UKN7 3530 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms