RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 ZNRF2Q8NHG8 242 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 MUC7Q8TAX7 377 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 TANC1Q9C0D5 1861 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 TRAV40A0A0B4J280 105 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 SDHAF1A6NFY7 115 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 E9PLD3 99 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 CD7P09564 240 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 ZGLP1P0C6A0 271 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 MED14OSP0DP75 135 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 UBE2E1P51965 193 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 CD164Q04900 197 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 NREPQ16612 68 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 ASPHD1Q5U4P2 390 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 GFRALQ6UXV0 394 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 TRAV7A0A075B6U4 112 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 IGHV3-43A0A0B4J1X8 118 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 LOC107984640A0A0U1RRK4 108 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 TMEM202A6NGA9 273 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 SPRY3O43610 288 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 IGHV3-43DP0DP04 118 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 SUPT4H1P63272 117 aaKnown RBP2.9□□□□□ -1.94
USP53-205ENST00000509769 PEAR1Q5VY43 1037 aaPredicted RBP2.9□□□□□ -1.94
USP53-205ENST00000509769 LYZL1Q6UWQ5 148 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 C2orf66Q6UXQ4 117 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 NAA38Q9BRA0 125 aaKnown RBP2.9□□□□□ -1.94
USP53-205ENST00000509769 REPIN1Q9BWE0 567 aaKnown RBP2.9□□□□□ -1.94
USP53-205ENST00000509769 TM2D2Q9BX73 214 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 EP400Q96L91 3159 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 MST1P26927 711 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 UBE2D2P62837 147 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 LAIR2Q6ISS4 152 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 TREML4Q6UXN2 200 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 Q6ZNB5 142 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 Q8N1Y9 231 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 BMPERQ8N8U9 685 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 DEFB108BQ8NET1 73 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 PRR7Q8TB68 274 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 TMEM167AQ8TBQ9 72 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 OPRPNQ99935 248 aaPredicted RBP2.9□□□□□ -1.94
USP53-205ENST00000509769 LIMD2Q9BT23 127 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 TNFRSF12AQ9NP84 129 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 V9GYV3 84 aa2.9□□□□□ -1.94
USP53-205ENST00000509769 RBAKDNA6NC62 111 aa2.9□□□□□ -1.95
USP53-205ENST00000509769 PPIFP30405 207 aaKnown RBP2.9□□□□□ -1.95
USP53-205ENST00000509769 PAX8Q06710 450 aa2.9□□□□□ -1.95
USP53-205ENST00000509769 PSG7Q13046 419 aa2.9□□□□□ -1.95
USP53-205ENST00000509769 LINC01590Q5TEZ4 76 aa2.9□□□□□ -1.95
USP53-205ENST00000509769 SIGLEC15Q6ZMC9 328 aa2.9□□□□□ -1.95
USP53-205ENST00000509769 LINC00312Q9Y6C7 94 aa2.9□□□□□ -1.95
USP53-205ENST00000509769 C11orf86A6NJI1 115 aa2.9□□□□□ -1.95
USP53-205ENST00000509769 LGALS9O00182 355 aa2.9□□□□□ -1.95
USP53-205ENST00000509769 PAX9P55771 341 aa2.9□□□□□ -1.95
USP53-205ENST00000509769 DEFB124Q8NES8 71 aa2.9□□□□□ -1.95
USP53-205ENST00000509769 AGPAT4-IT1Q9H0P7 198 aa2.9□□□□□ -1.95
USP53-205ENST00000509769 TRBV25-1A0A075B6N4 114 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 A6NED7 52 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 SH2D1AO60880 128 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 NDUFS7O75251 213 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 CCL4P13236 92 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 SERTAD4-AS1Q5TG53 156 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 LILRA6Q6PI73 481 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 CRIPAKQ8N1N5 446 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 RNF152Q8N8N0 203 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 INS-IGF2F8WCM5 200 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 J3QRE1 110 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 COX7A2LO14548 114 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 INSP01308 110 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 PCOLCEQ15113 449 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 FAM222AQ5U5X8 452 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 ZNF474Q6S9Z5 364 aaPredicted RBP2.89□□□□□ -1.95
USP53-205ENST00000509769 LINC00467Q9BRT7 94 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 DKK2Q9UBU2 259 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 VPREB3Q9UKI3 123 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 A0A096LPE4 126 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 TRBV30A0A0K0K1B3 111 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 A0A1W2PPZ6 126 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 WIPF1O43516 503 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 IGHV1-69P01742 117 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 RPS27P42677 84 aaKnown RBP2.89□□□□□ -1.95
USP53-205ENST00000509769 HIGD2BQ4VC39 106 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 FHL5Q5TD97 284 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 MORN5Q5VZ52 161 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 RPP25LQ8N5L8 163 aaKnown RBP2.89□□□□□ -1.95
USP53-205ENST00000509769 FAM216BQ8N7L0 139 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 FXYD5Q96DB9 178 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 ZC2HC1AQ96GY0 325 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 RASL10BQ96S79 203 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 ATAD5Q96QE3 1844 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 KAT6AQ92794 2004 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 IGHV1-58A0A0C4DH39 117 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 TRBV10-3A0A0K0K1G6 114 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 ZNF876PQ49A33 203 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 TIMM17AQ99595 171 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 UPK3BQ9BT76 320 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 TP73-AS1Q9UF72 201 aa2.89□□□□□ -1.95
USP53-205ENST00000509769 NAV1Q8NEY1 1877 aa2.88□□□□□ -1.95
USP53-205ENST00000509769 TRBV7-1A0A0A6YYK4 115 aa2.88□□□□□ -1.95
USP53-205ENST00000509769 A0A1B0GUS0 222 aa2.88□□□□□ -1.95
USP53-205ENST00000509769 K7EM74 188 aa2.88□□□□□ -1.95
USP53-205ENST00000509769 CELA2AP08217 269 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms