RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 PSG3Q16557 428 aa6.07□□□□□ -1.44
SSBP2-213ENST00000509743 SMUG1Q53HV7 270 aa6.07□□□□□ -1.44
SSBP2-213ENST00000509743 COA6Q5JTJ3 125 aaKnown RBP6.07□□□□□ -1.44
SSBP2-213ENST00000509743 PRR27Q6MZM9 219 aa6.07□□□□□ -1.44
SSBP2-213ENST00000509743 BCL6BQ8N143 479 aaPredicted RBP6.07□□□□□ -1.44
SSBP2-213ENST00000509743 NUDT10Q8NFP7 164 aa6.07□□□□□ -1.44
SSBP2-213ENST00000509743 TSKUQ8WUA8 353 aa6.07□□□□□ -1.44
SSBP2-213ENST00000509743 DAZAP1Q96EP5 407 aaKnown RBP6.07□□□□□ -1.44
SSBP2-213ENST00000509743 NUDT11Q96G61 164 aa6.07□□□□□ -1.44
SSBP2-213ENST00000509743 C17orf77Q96MU5 243 aa6.07□□□□□ -1.44
SSBP2-213ENST00000509743 NOL4LQ96MY1 436 aaPredicted RBP6.07□□□□□ -1.44
SSBP2-213ENST00000509743 GNB1LQ9BYB4 327 aa6.07□□□□□ -1.44
SSBP2-213ENST00000509743 PRSS22Q9GZN4 317 aa6.07□□□□□ -1.44
SSBP2-213ENST00000509743 NPFFR1Q9GZQ6 430 aa6.07□□□□□ -1.44
SSBP2-213ENST00000509743 GFRA4Q9GZZ7 299 aa6.07□□□□□ -1.44
SSBP2-213ENST00000509743 RPP21Q9H633 154 aaKnown RBP6.07□□□□□ -1.44
SSBP2-213ENST00000509743 CLEC5AQ9NY25 188 aa6.07□□□□□ -1.44
SSBP2-213ENST00000509743 NAT8BQ9UHF3 227 aa6.07□□□□□ -1.44
SSBP2-213ENST00000509743 PSG8Q9UQ74 426 aa6.07□□□□□ -1.44
SSBP2-213ENST00000509743 RELNP78509 3460 aa6.06□□□□□ -1.44
SSBP2-213ENST00000509743 IGHV3-35A0A0C4DH35 117 aa6.06□□□□□ -1.44
SSBP2-213ENST00000509743 C19orf71A6NCJ1 209 aa6.06□□□□□ -1.44
SSBP2-213ENST00000509743 ZNF785A8K8V0 405 aa6.06□□□□□ -1.44
SSBP2-213ENST00000509743 IGHG4P01861 327 aa6.06□□□□□ -1.44
SSBP2-213ENST00000509743 HLA-DQA1P01909 254 aa6.06□□□□□ -1.44
SSBP2-213ENST00000509743 SMIM6P0DI80 62 aa6.06□□□□□ -1.44
SSBP2-213ENST00000509743 SAPCD1Q5SSQ6 148 aa6.06□□□□□ -1.44
SSBP2-213ENST00000509743 ATP5L2Q7Z4Y8 100 aa6.06□□□□□ -1.44
SSBP2-213ENST00000509743 PRNTQ86SH4 94 aa6.06□□□□□ -1.44
SSBP2-213ENST00000509743 LINC00518Q8N0U6 118 aa6.06□□□□□ -1.44
SSBP2-213ENST00000509743 GBGT1Q8N5D6 347 aa6.06□□□□□ -1.44
SSBP2-213ENST00000509743 TMEM86BQ8N661 226 aa6.06□□□□□ -1.44
SSBP2-213ENST00000509743 MRPL53Q96EL3 112 aaKnown RBP6.06□□□□□ -1.44
SSBP2-213ENST00000509743 ZNF331Q9NQX6 463 aaPredicted RBP6.06□□□□□ -1.44
SSBP2-213ENST00000509743 SMAD5-AS1Q9Y6J3 95 aa6.06□□□□□ -1.44
SSBP2-213ENST00000509743 TRAV8-1A0A0A6YYK1 113 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 A0A1W2PS18 150 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 XKRY2A2RUG3 117 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 RBAKDNA6NC62 111 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 NPIPB6E9PJ23 425 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 M0R3E3 92 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 CT45A10P0DMU9 189 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 CBLN1P23435 193 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 S100A2P29034 98 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 TCL1AP56279 114 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 SLC35B1P78383 322 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 C16orf54Q6UWD8 224 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 COX8CQ7Z4L0 72 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 HIST3H2BBQ8N257 126 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 CIARTQ8N365 385 aaPredicted RBP6.05□□□□□ -1.44
SSBP2-213ENST00000509743 OR4X2Q8NGF9 303 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 WIPF2Q8TF74 440 aaPredicted RBP6.05□□□□□ -1.44
SSBP2-213ENST00000509743 SGK494Q96LW2 274 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 ZFYVE26Q68DK2 2539 aa6.05□□□□□ -1.44
SSBP2-213ENST00000509743 CACNA1BQ00975 2339 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 IGHV3OR16-8A0A075B7F1 116 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 HIGD1CA8MV81 97 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 SNURFLB1AK76 121 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 K7EMT4 169 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 CHEK1O14757 476 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 HOXA3O43365 443 aaPredicted RBP6.04□□□□□ -1.44
SSBP2-213ENST00000509743 ELANEP08246 267 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 PSMB8P28062 276 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 BMI1P35226 326 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 FOXE3Q13461 319 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 Q6AWC8 147 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 Q6ZS46 218 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 NUP35Q8NFH5 326 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 GLMPQ8WWB7 406 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 NEU1Q99519 415 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 FOXC2Q99958 501 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 NDFIP1Q9BT67 221 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 MRPL18Q9H0U6 180 aaKnown RBP6.04□□□□□ -1.44
SSBP2-213ENST00000509743 KLK15Q9H2R5 256 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 PEF1Q9UBV8 284 aaKnown RBP6.04□□□□□ -1.44
SSBP2-213ENST00000509743 EPG5Q9HCE0 2579 aa6.04□□□□□ -1.44
SSBP2-213ENST00000509743 SPTBN1Q01082 2364 aaKnown RBP6.03□□□□□ -1.44
SSBP2-213ENST00000509743 TNCP24821 2201 aa6.03□□□□□ -1.44
SSBP2-213ENST00000509743 COL12A1Q99715 3063 aa6.03□□□□□ -1.44
SSBP2-213ENST00000509743 FBN2P35556 2912 aa6.03□□□□□ -1.44
SSBP2-213ENST00000509743 IGKV2-40A0A087WW87 121 aaPredicted RBP6.03□□□□□ -1.44
SSBP2-213ENST00000509743 CA1P00915 261 aaPredicted RBP6.03□□□□□ -1.44
SSBP2-213ENST00000509743 IGKV2D-40P01614 121 aaPredicted RBP6.03□□□□□ -1.44
SSBP2-213ENST00000509743 IGHV3-11P01762 117 aa6.03□□□□□ -1.44
SSBP2-213ENST00000509743 FAM106AQ4KMX7 169 aa6.03□□□□□ -1.44
SSBP2-213ENST00000509743 LCN12Q6JVE5 192 aa6.03□□□□□ -1.44
SSBP2-213ENST00000509743 TMEM136Q6ZRR5 245 aa6.03□□□□□ -1.44
SSBP2-213ENST00000509743 RBPMS2Q6ZRY4 209 aaKnown RBP6.03□□□□□ -1.44
SSBP2-213ENST00000509743 C8orf86Q6ZUL3 223 aa6.03□□□□□ -1.44
SSBP2-213ENST00000509743 Q8N2B8 174 aa6.03□□□□□ -1.44
SSBP2-213ENST00000509743 WFDC11Q8NEX6 87 aa6.03□□□□□ -1.44
SSBP2-213ENST00000509743 OR2D3Q8NGH3 330 aa6.03□□□□□ -1.44
SSBP2-213ENST00000509743 ZC2HC1AQ96GY0 325 aa6.03□□□□□ -1.44
SSBP2-213ENST00000509743 C12orf57Q99622 126 aa6.03□□□□□ -1.44
SSBP2-213ENST00000509743 ZNF702PQ9H963 129 aa6.03□□□□□ -1.44
SSBP2-213ENST00000509743 DAZ1Q9NQZ3 744 aaKnown RBP6.03□□□□□ -1.44
SSBP2-213ENST00000509743 SMG1Q96Q15 3661 aaKnown RBP6.03□□□□□ -1.44
SSBP2-213ENST00000509743 DOCK11Q5JSL3 2073 aa6.03□□□□□ -1.44
SSBP2-213ENST00000509743 IGHV3-66A0A0C4DH42 116 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms