RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 COL8A2P25067 703 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 CD70P32970 193 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 MP68P56378 58 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 CDK5R1Q15078 307 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 ZNF678Q5SXM1 525 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 ZC2HC1BQ5TFG8 222 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 TMEM91Q6ZNR0 172 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 NOTCH2NLQ7Z3S9 236 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 SIGLECL1Q8N7X8 197 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 C3orf56Q8N813 242 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 C15orf53Q8NAA6 179 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 LRRC29Q8WV35 223 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 GTSF1Q8WW33 167 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 LINC00479Q96M42 142 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 DPH3P1Q9H4G8 78 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 TNFRSF19Q9NS68 423 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 SLC39A9Q9NUM3 307 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 CKLFQ9UBR5 152 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 NUP210Q8TEM1 1887 aaPredicted RBP3.43□□□□□ -1.86
NIPBL-206ENST00000509429 NYNRINQ9P2P1 1898 aaKnown RBP3.43□□□□□ -1.86
NIPBL-206ENST00000509429 PTPRDP23468 1912 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 TRAV9-1A0A075B6T8 112 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 IGKV1D-13A0A0B4J2D9 117 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 TRBV27A0A0K0K1C4 114 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 C4orf51C9J302 202 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 WISP3O95389 354 aaPredicted RBP3.42□□□□□ -1.86
NIPBL-206ENST00000509429 PPP1R3DO95685 299 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 IGKV1-13P0DP09 117 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 FAUP35544 74 aaKnown RBP3.42□□□□□ -1.86
NIPBL-206ENST00000509429 LMO4P61968 165 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 MRPS36P82909 103 aaKnown RBP3.42□□□□□ -1.86
NIPBL-206ENST00000509429 Q6ZS49 121 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 LCA10Q71F78 164 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 C6orf223Q8N319 242 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 C11orf72Q8NBR9 251 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 APCDD1LQ8NCL9 501 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 CNRIP1Q96F85 164 aaPredicted RBP3.42□□□□□ -1.86
NIPBL-206ENST00000509429 RNF185Q96GF1 192 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 RITA1Q96K30 269 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 CHCHD5Q9BSY4 110 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 GABARAPL1Q9H0R8 117 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 PLEKHF2Q9H8W4 249 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 SDF2L1Q9HCN8 221 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 VWA8A3KMH1 1905 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 GREB1Q4ZG55 1949 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 MCM3APO60318 1980 aa3.42□□□□□ -1.86
NIPBL-206ENST00000509429 TRAV14DV4A0A0A6YYC5 116 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 A0A0D9SEW6 157 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 EPOPA6NHQ4 379 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 A8MUN3 132 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 E9PLD3 99 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 H0YIZ8 118 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 K7EM74 188 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 M0R381 172 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 SDCBPO00560 298 aaPredicted RBP3.41□□□□□ -1.86
NIPBL-206ENST00000509429 TCL1BO95988 128 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 IGLV3-25P01717 112 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 HSPB1P04792 205 aaKnown RBP3.41□□□□□ -1.86
NIPBL-206ENST00000509429 SMIM13P0DJ93 91 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 LGALS3P17931 250 aaKnown RBP3.41□□□□□ -1.86
NIPBL-206ENST00000509429 IL3RAP26951 378 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 GNB2P62879 340 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 LINC00303Q3SY05 128 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 LGALS9CQ6DKI2 356 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 PHF5AQ7RTV0 110 aaKnown RBP3.41□□□□□ -1.86
NIPBL-206ENST00000509429 POM121L12Q8N7R1 296 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 PRSS33Q8NF86 280 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 OR8A1Q8NGG7 326 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 OR5C1Q8NGR4 320 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 FAM213BQ8TBF2 198 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 STAG3L4Q8TBR4 150 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 MRPL30Q8TCC3 161 aaKnown RBP3.41□□□□□ -1.86
NIPBL-206ENST00000509429 MYOZ3Q8TDC0 251 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 TOMM6Q96B49 74 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 PLEKHA3Q9HB20 300 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 ZNF835Q9Y2P0 537 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 NLRC5Q86WI3 1866 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 FANCMQ8IYD8 2048 aa3.41□□□□□ -1.86
NIPBL-206ENST00000509429 SCN8AQ9UQD0 1980 aa3.4□□□□□ -1.86
NIPBL-206ENST00000509429 TRBV20OR9-2A0A075B6H5 130 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 ZFP92A6NM28 416 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 C12orf77C9JDV5 145 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 FAM72CH0Y354 149 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 LST1O00453 97 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 ZNF73O43830 326 aaPredicted RBP3.4□□□□□ -1.87
NIPBL-206ENST00000509429 NUPR1O60356 82 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 IGHV3-7P01780 117 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 IGLL1P15814 213 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 ZNF80P51504 273 aaPredicted RBP3.4□□□□□ -1.87
NIPBL-206ENST00000509429 NPC2P61916 151 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 C10orf25Q5T742 122 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 FAM72AQ5TYM5 149 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 FAM72DQ6L9T8 149 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 LINC00596Q86U02 117 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 FAM72BQ86X60 149 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 SBSPONQ8IVN8 264 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 AMN1Q8IY45 258 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 ZNF101Q8IZC7 436 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms