RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 UBE2D3P61077 147 aa7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 UBE2D2P62837 147 aa7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 POU2AF1Q16633 256 aa7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 HES3Q5TGS1 186 aa7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 MBNL2Q5VZF2 373 aaKnown RBP7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 Q6ZS52 159 aa7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 FREM1Q5H8C1 2179 aa7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 TRAV4A0A0B4J268 109 aa7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 TRBV6-1A0A0K0K1D8 114 aa7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 LINC01546A6NGU7 62 aa7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 LINC01548A6NM66 108 aa7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 PRSS1P07477 247 aa7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 MRPL51Q4U2R6 128 aaKnown RBP7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 PLXDC1Q8IUK5 500 aa7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 ANKRD29Q8N6D5 301 aa7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 RASL11BQ9BPW5 248 aa7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 Q9H3A6 140 aa7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 MDFICQ9P1T7 246 aa7.97□□□□□ -1.13
PDGFRA-207ENST00000509092 TECTAO75443 2155 aa7.96□□□□□ -1.13
PDGFRA-207ENST00000509092 MYMXA0A1B0GTQ4 84 aa7.96□□□□□ -1.14
PDGFRA-207ENST00000509092 MRPL33O75394 65 aaKnown RBP7.96□□□□□ -1.14
PDGFRA-207ENST00000509092 PLAUP00749 431 aa7.96□□□□□ -1.14
PDGFRA-207ENST00000509092 PF4V1P10720 104 aa7.96□□□□□ -1.14
PDGFRA-207ENST00000509092 CFHR1Q03591 330 aa7.96□□□□□ -1.14
PDGFRA-207ENST00000509092 AMN1Q8IY45 258 aa7.96□□□□□ -1.14
PDGFRA-207ENST00000509092 FOXC2Q99958 501 aa7.96□□□□□ -1.14
PDGFRA-207ENST00000509092 FAM173AQ9BQD7 235 aa7.96□□□□□ -1.14
PDGFRA-207ENST00000509092 AKIRIN1Q9H9L7 192 aaPredicted RBP7.96□□□□□ -1.14
PDGFRA-207ENST00000509092 LOC107984156A0A0G2JMH3 177 aa7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 UPK2O00526 184 aa7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 GRPP07492 148 aa7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 PRNTQ86SH4 94 aa7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 ARL17AQ8IVW1 177 aa7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 RBMXL3Q8N7X1 1067 aaKnown RBP7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 IGHV1OR21-1A0A087WYE8 117 aa7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 ZNF785A8K8V0 405 aa7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 WNT9BO14905 357 aa7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 NPYP01303 97 aa7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 IGLV2-11P01706 119 aa7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 HOXB4P17483 251 aaPredicted RBP7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 ZFP2Q6ZN57 461 aa7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 RASL10AQ92737 203 aa7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 FLYWCH2Q96CP2 140 aaKnown RBP7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 DCTN5Q9BTE1 182 aa7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 TPPP3Q9BW30 176 aa7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 FZR1Q9UM11 496 aa7.95□□□□□ -1.14
PDGFRA-207ENST00000509092 TRAV8-1A0A0A6YYK1 113 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 IGHV3-64DA0A0J9YX35 117 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 LINC01549A6NIU2 74 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 NCBP2LA6PVI3 153 aaKnown RBP7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 CRLF1O75462 422 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 DEFB133Q30KQ1 61 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 THAP8Q8NA92 274 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 OR10J6PQ8NGY7 276 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 IGKV1D-37A0A075B6S9 117 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 DUX1O43812 170 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 TFF1P04155 84 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 GP9P14770 177 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 CKS2P33552 79 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 LEPP41159 167 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 SPRNQ5BIV9 151 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 OTORQ9NRC9 128 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 TMEM160Q9NX00 188 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 SDK1Q7Z5N4 2213 aa7.94□□□□□ -1.14
PDGFRA-207ENST00000509092 TMEM213A2RRL7 107 aa7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 TNFRSF1AP19438 455 aa7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 ZNF134P52741 427 aa7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 FOXG1P55316 489 aaPredicted RBP7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 C1orf229Q6ZS94 237 aaPredicted RBP7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 Q71RC1 249 aaPredicted RBP7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 DNAJC30Q96LL9 226 aa7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 SPRY4Q9C004 299 aa7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 METRNQ9UJH8 293 aa7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 TNCP24821 2201 aa7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 ASXL3Q9C0F0 2248 aa7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 IGKV3D-15A0A087WSY6 115 aa7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 TMSB15BA0A087X1C1 80 aa7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 TRAV8-2A0A0B4J237 113 aa7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 TRAV40A0A0B4J280 105 aa7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 WIPF1O43516 503 aa7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 UBE2D1P51668 147 aa7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 TMEM78Q5T7P6 136 aa7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 NPIPB3Q92617 1050 aa7.93□□□□□ -1.14
PDGFRA-207ENST00000509092 A0A1W2PPI3 338 aa7.92□□□□□ -1.14
PDGFRA-207ENST00000509092 SMKR1H3BMG3 65 aa7.92□□□□□ -1.14
PDGFRA-207ENST00000509092 TCL1BO95988 128 aa7.92□□□□□ -1.14
PDGFRA-207ENST00000509092 CXCL12P48061 93 aa7.92□□□□□ -1.14
PDGFRA-207ENST00000509092 LOXL3P58215 753 aa7.92□□□□□ -1.14
PDGFRA-207ENST00000509092 TBC1D28Q2M2D7 210 aa7.92□□□□□ -1.14
PDGFRA-207ENST00000509092 LYZL1Q6UWQ5 148 aa7.92□□□□□ -1.14
PDGFRA-207ENST00000509092 GOLT1AQ6ZVE7 132 aa7.92□□□□□ -1.14
PDGFRA-207ENST00000509092 H3BVH4 76 aa7.92□□□□□ -1.14
PDGFRA-207ENST00000509092 CELA2AP08217 269 aa7.92□□□□□ -1.14
PDGFRA-207ENST00000509092 SCGB1C2P0DMR2 95 aa7.92□□□□□ -1.14
PDGFRA-207ENST00000509092 SSR4P51571 173 aa7.92□□□□□ -1.14
PDGFRA-207ENST00000509092 EDDM3AQ14507 147 aa7.92□□□□□ -1.14
PDGFRA-207ENST00000509092 LINC01587Q99440 93 aa7.92□□□□□ -1.14
PDGFRA-207ENST00000509092 TRGV9Q99603 122 aa7.92□□□□□ -1.14
PDGFRA-207ENST00000509092 MRPL35Q9NZE8 188 aaKnown RBP7.92□□□□□ -1.14
PDGFRA-207ENST00000509092 SIT1Q9Y3P8 196 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms