RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 CHCHD1Q96BP2 118 aaKnown RBP1.38□□□□□ -2.19
DEPDC1B-204ENST00000509006 MINOS1-NBL1R4GNA1 71 aa1.38□□□□□ -2.19
DEPDC1B-204ENST00000509006 TNS3Q68CZ2 1445 aa1.38□□□□□ -2.19
DEPDC1B-204ENST00000509006 PLXND1Q9Y4D7 1925 aa1.38□□□□□ -2.19
DEPDC1B-204ENST00000509006 XIRP1Q702N8 1843 aaKnown RBP1.38□□□□□ -2.19
DEPDC1B-204ENST00000509006 UHRF1BP1LA0JNW5 1464 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 HIVEP2P31629 2446 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 DLC1Q96QB1 1528 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 NISCHQ9Y2I1 1504 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 DENND4CQ5VZ89 1909 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 TRAV27A0A087WT01 109 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 IGKV2-24A0A0C4DH68 120 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 COLCA2A8K830 154 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 ATP6V1G2-DDX39BF2Z307 99 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 F6UZH7 168 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 M0R233 179 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 NPFFO15130 113 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 GNG7O60262 68 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 IGLV6-57P01721 117 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 TRACP01848 142 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 S100A8P05109 93 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 IGLC6P0CF74 106 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 HLA-DRB4P13762 266 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 FGF7P21781 194 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 AKR1D1P51857 326 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 PLGLB1Q02325 96 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 ZNF345Q14585 488 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 CDK5R1Q15078 307 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 LINC01545Q5VT33 79 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 Q5XG85 94 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 IZUMO2Q6UXV1 221 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 ZNF826PQ6ZT77 177 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 RPS19BP1Q86WX3 136 aaKnown RBP1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 OR4X2Q8NGF9 303 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 OR2T35Q8NGX2 323 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 TMEM254Q8TBM7 123 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 ZNF418Q8TF45 676 aaPredicted RBP1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 DEDD2Q8WXF8 326 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 OR4C12Q96R67 309 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 C12orf57Q99622 126 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 Q9BRP9 147 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 PSMG3Q9BT73 122 aaPredicted RBP1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 CST9LQ9H4G1 147 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 HLA-DRB4X5D2U9 266 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 PTPRGP23470 1445 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 PRG4Q92954 1404 aaPredicted RBP1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 TRPM3Q9HCF6 1732 aaPredicted RBP1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 GRIN2AQ12879 1464 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 TRPM1Q7Z4N2 1603 aa1.37□□□□□ -2.19
DEPDC1B-204ENST00000509006 IBTKQ9P2D0 1353 aaPredicted RBP1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 IGLV10-54A0A075B6I4 117 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 PIGBOS1A0A0B4J2F0 54 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 hDV103S1A0JD37 113 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 C20orf202A1L168 122 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 ZNF670-ZNF695F2Z2N8 137 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 LY6LH3BQJ8 138 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 K7ERJ3 54 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 OR1I1O60431 355 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 UBL3O95164 117 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 TCRAP04437 139 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 CTSGP08311 255 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 MIFP14174 115 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 HIST1H1DP16402 221 aaKnown RBP1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 ZNF25P17030 456 aaPredicted RBP1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 FOXA3P55318 350 aaPredicted RBP1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 CDK6Q00534 326 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 PCM1Q15154 2024 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 PATE2Q6UY27 113 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 TMEM91Q6ZNR0 172 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 TEN1Q86WV5 123 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 C10orf111Q8N326 155 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 KCNRGQ8N5I3 272 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 PSMF1Q92530 271 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 MUCL1Q96DR8 90 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 PPP3R2Q96LZ3 170 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 HYLS1Q96M11 299 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 METTL1Q9UBP6 276 aaKnown RBP1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 TNFSF18Q9UNG2 199 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 SCAF11Q99590 1463 aaKnown RBP1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 DOCK4Q8N1I0 1966 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 SPEF2Q9C093 1822 aa1.36□□□□□ -2.19
DEPDC1B-204ENST00000509006 KDM5BQ9UGL1 1544 aa1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 CCNB3Q8WWL7 1395 aa1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 NUP210LQ5VU65 1888 aa1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 NYNRINQ9P2P1 1898 aaKnown RBP1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 TRBV20-1A0A075B6N2 111 aa1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 A0A0G2JMM0 328 aa1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 A0A1W2PPB8 328 aa1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 ZNF727A8MUV8 499 aa1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 KIR3DP1A8MWS1 328 aa1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 ODF3BA8MYP8 253 aa1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 FNDC10F2Z333 226 aa1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 SHBGP04278 402 aa1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 SLC25A5P05141 298 aaKnown RBP1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 CTSDP07339 412 aaPredicted RBP1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 AKAIN1P0CW23 69 aa1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 LINC00694P0DN24 101 aa1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 PYYP10082 97 aa1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 MGST1P10620 155 aaKnown RBP1.35□□□□□ -2.19
DEPDC1B-204ENST00000509006 CRYGAP11844 174 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms