RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 LINC00305Q7Z4B0 112 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 GATAD1Q8WUU5 269 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 GPR146Q96CH1 333 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 MRPL20Q9BYC9 149 aaKnown RBP2.39□□□□□ -2.03
NEDD4-208ENST00000508342 SIGLEC9Q9Y336 463 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 CENPVL3A0A0U1RRI6 287 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 B4DEV8 164 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 DIRC3C9JPN6 131 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 PEX7O00628 323 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 AMBPP02760 352 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 RPL29P47914 159 aaKnown RBP2.39□□□□□ -2.03
NEDD4-208ENST00000508342 CRYBA2P53672 197 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 TMEM50BP56557 158 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 C11orf87Q6NUJ2 197 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 LHFPL4Q7Z7J7 247 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 BOD1L2Q8IYS8 172 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 NKAPP1Q8N9T2 125 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-208ENST00000508342 WFDC12Q8WWY7 111 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 ADAT3Q96EY9 351 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-208ENST00000508342 U3KQK5 164 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 PCNX3Q9H6A9 2034 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 IGHV1-3A0A0C4DH29 117 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 RRHO14718 337 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 MLNRO43193 412 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 NAPSAO96009 420 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 CD55P08174 381 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 C15orf32Q32M92 178 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 ZNF660Q6AZW8 331 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-208ENST00000508342 SPATA3Q8NHX4 192 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 TMEM170AQ8WVE7 144 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 SMIM8Q96KF7 97 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 HEATR5AQ86XA9 2040 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 TRBV7-1A0A0A6YYK4 115 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 TRBV9A0A0B4J1U6 114 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 NPIPB13A6NJU9 1138 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 A8MXK9 166 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 WISP2O76076 250 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 NDUFB6O95139 128 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 NDUFB8O95169 186 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 IGLV1-44P01699 117 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 C1QCP02747 245 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 TRGC2P03986 189 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 FXYD7P58549 80 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 FAM74A3Q4VXF1 159 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 MORN2Q502X0 79 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 TEX36Q5VZQ5 186 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 HIST1H4GQ99525 98 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 RBKSQ9H477 322 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 LOC102724200A0A096LPH7 203 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-208ENST00000508342 IGKV1D-43A0A0B4J1Z2 117 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 PRB2P02812 416 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-208ENST00000508342 HOXA5P20719 270 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 P2RY1P47900 373 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 PNRC1Q12796 327 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-208ENST00000508342 ASPHD1Q5U4P2 390 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 PHYHIPLQ96FC7 376 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 PGLYRP4Q96LB8 373 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 SLC35B3Q9H1N7 401 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 USP24Q9UPU5 2620 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 FAM74A7A6NL05 159 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 FABP5P3A8MUU1 101 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 DDTP30046 118 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 DEFB131AP59861 70 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 SERF2P84101 59 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 RPL39P5Q59GN2 51 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 IBA57Q5T440 356 aaKnown RBP2.39□□□□□ -2.03
NEDD4-208ENST00000508342 SIGLEC15Q6ZMC9 328 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 LYZL2Q7Z4W2 148 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 OCC1Q8TAD7 63 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 Q8TCH9 128 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 HDHD3Q9BSH5 251 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-208ENST00000508342 DUSP21Q9H596 190 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 Q9HAA7 133 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 X6R8D5 127 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 IGLV1-36A0A0B4J1U3 117 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 FBLL1A6NHQ2 334 aaKnown RBP2.38□□□□□ -2.03
NEDD4-208ENST00000508342 TBX6O95947 436 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-208ENST00000508342 VWC2Q2TAL6 325 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 LINC01551Q86U37 167 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 RNASEH2CQ8TDP1 164 aaKnown RBP2.38□□□□□ -2.03
NEDD4-208ENST00000508342 ORAOV1Q8WV07 137 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 NPCDR1Q9BY65 106 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 KRTAP3-3Q9BYR6 98 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 KRTAP3-2Q9BYR7 98 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 GSN-AS1Q9NRJ2 163 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 B5MCH6 92 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 HLA-DRB1P01911 266 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 TIRAPP58753 221 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 CYP2G1PQ6ZSU1 146 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 H1FOOQ8IZA3 346 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-208ENST00000508342 MRPL32Q9BYC8 188 aaKnown RBP2.38□□□□□ -2.03
NEDD4-208ENST00000508342 XCL2Q9UBD3 114 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 ZNF257Q9Y2Q1 563 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 A0A0G2JK05 382 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 PAX4O43316 350 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 TOMM40O96008 361 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 DEFB136Q30KP8 78 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 MIC13Q5XKP0 118 aa2.38□□□□□ -2.03
NEDD4-208ENST00000508342 TMEM91Q6ZNR0 172 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms