RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 IGLV11-55A0A075B6I3 123 aa11.37□□□□□ -0.59
DDX41-208ENST00000507955 A0A1B0GXF2 115 aa11.37□□□□□ -0.59
DDX41-208ENST00000507955 SAA4P35542 130 aa11.37□□□□□ -0.59
DDX41-208ENST00000507955 LMO4P61968 165 aa11.37□□□□□ -0.59
DDX41-208ENST00000507955 SPATA12Q7Z6I5 190 aa11.37□□□□□ -0.59
DDX41-208ENST00000507955 ZANQ9Y493 2812 aa11.36□□□□□ -0.59
DDX41-208ENST00000507955 IGHV7-81A0A0B4J1V7 117 aa11.36□□□□□ -0.59
DDX41-208ENST00000507955 RASL11AQ6T310 242 aa11.36□□□□□ -0.59
DDX41-208ENST00000507955 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
DDX41-208ENST00000507955 Q8N6K4 173 aa11.36□□□□□ -0.59
DDX41-208ENST00000507955 IGHV2-70DA0A0C4DH43 119 aa11.36□□□□□ -0.59
DDX41-208ENST00000507955 M0QZ24 198 aa11.36□□□□□ -0.59
DDX41-208ENST00000507955 IGLV2-11P01706 119 aa11.36□□□□□ -0.59
DDX41-208ENST00000507955 HIST1H1EP10412 219 aaKnown RBP11.36□□□□□ -0.59
DDX41-208ENST00000507955 IGFL4Q6B9Z1 124 aa11.36□□□□□ -0.59
DDX41-208ENST00000507955 GTSF1Q8WW33 167 aa11.36□□□□□ -0.59
DDX41-208ENST00000507955 SHANK2-AS3Q9BTD1 123 aa11.36□□□□□ -0.59
DDX41-208ENST00000507955 LTAP01374 205 aa11.35□□□□□ -0.59
DDX41-208ENST00000507955 KLF5Q13887 457 aaPredicted RBP11.35□□□□□ -0.59
DDX41-208ENST00000507955 ECSCRQ19T08 205 aa11.35□□□□□ -0.59
DDX41-208ENST00000507955 STPG4Q8N801 248 aa11.35□□□□□ -0.59
DDX41-208ENST00000507955 Q8N9W7 124 aa11.35□□□□□ -0.59
DDX41-208ENST00000507955 CHRDL1Q9BU40 450 aa11.35□□□□□ -0.59
DDX41-208ENST00000507955 FAM181BA6NEQ2 426 aa11.35□□□□□ -0.59
DDX41-208ENST00000507955 TOMM40O96008 361 aa11.35□□□□□ -0.59
DDX41-208ENST00000507955 RNASEKQ6P5S7 137 aaKnown RBP11.35□□□□□ -0.59
DDX41-208ENST00000507955 OR2D3Q8NGH3 330 aa11.35□□□□□ -0.59
DDX41-208ENST00000507955 BORCS7Q96B45 105 aa11.35□□□□□ -0.59
DDX41-208ENST00000507955 TMUB1Q9BVT8 246 aa11.35□□□□□ -0.59
DDX41-208ENST00000507955 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.34□□□□□ -0.596e-7■■■■□ 23.3
DDX41-208ENST00000507955 TRBV19A0A075B6N1 114 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 ZNF785A8K8V0 405 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 H3BRN7 92 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 IGHV4-39P01824 125 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 PMCHL1Q16048 86 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 CCDC144NLQ6NUI1 221 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 C1orf122Q6ZSJ8 110 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 BPIFA4PQ86YQ2 179 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 PGLYRP4Q96LB8 373 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 UQCR10Q9UDW1 63 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 GOLT1BQ9Y3E0 138 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 SOX21Q9Y651 276 aaPredicted RBP11.34□□□□□ -0.59
DDX41-208ENST00000507955 G3V318 75 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 HSBP1O75506 76 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 Q6ZN92 141 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 TMEM219Q86XT9 240 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 SRSF8Q9BRL6 282 aaKnown RBP11.34□□□□□ -0.59
DDX41-208ENST00000507955 C21orf62Q9NYP8 219 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 LINC00527Q9UJ94 153 aa11.34□□□□□ -0.59
DDX41-208ENST00000507955 C2orf70A6NJV1 201 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 M0R2Z0 102 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 HLA-DRB1P01911 266 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 Q86TA4 180 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 FMC1Q96HJ9 113 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 PRSS22Q9GZN4 317 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 OTORQ9NRC9 128 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 CLEC5AQ9NY25 188 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 DOPEY1Q5JWR5 2465 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 FAM208BQ5VWN6 2430 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 NPIPB5A8MRT5 1133 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 MFAP4P55083 255 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 FOXA3P55318 350 aaPredicted RBP11.33□□□□□ -0.6
DDX41-208ENST00000507955 GAGE1Q13065 139 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 BRD3OSQ6XYD6 125 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 SIGLEC15Q6ZMC9 328 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 TTC9CQ8N5M4 171 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 TXN2Q99757 166 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 TMEM14CQ9P0S9 112 aa11.33□□□□□ -0.6
DDX41-208ENST00000507955 USP9YO00507 2555 aaPredicted RBP11.32□□□□□ -0.6
DDX41-208ENST00000507955 WI2-2373I1.2A0A1W2PRP0 233 aa11.32□□□□□ -0.6
DDX41-208ENST00000507955 C19orf71A6NCJ1 209 aa11.32□□□□□ -0.6
DDX41-208ENST00000507955 MRPS12O15235 138 aaKnown RBP11.32□□□□□ -0.6
DDX41-208ENST00000507955 P01737 135 aa11.32□□□□□ -0.6
DDX41-208ENST00000507955 OR4F17Q8NGA8 305 aa11.32□□□□□ -0.6
DDX41-208ENST00000507955 ZNF414Q96IQ9 312 aa11.32□□□□□ -0.6
DDX41-208ENST00000507955 RPP21Q9H633 154 aaKnown RBP11.32□□□□□ -0.6
DDX41-208ENST00000507955 TP73-AS1Q9UF72 201 aa11.32□□□□□ -0.6
DDX41-208ENST00000507955 CSPG4Q6UVK1 2322 aa11.32□□□□□ -0.6
DDX41-208ENST00000507955 IGHV3OR16-13A0A075B7E8 117 aa11.32□□□□□ -0.6
DDX41-208ENST00000507955 IGHV3-74A0A0B4J1X5 117 aa11.32□□□□□ -0.6
DDX41-208ENST00000507955 ATP6V0E1O15342 81 aa11.32□□□□□ -0.6
DDX41-208ENST00000507955 CTSGP08311 255 aa11.32□□□□□ -0.6
DDX41-208ENST00000507955 COL5A1-AS1Q5SY13 56 aa11.32□□□□□ -0.6
DDX41-208ENST00000507955 MINOS1Q5TGZ0 78 aa11.32□□□□□ -0.6
DDX41-208ENST00000507955 ZC2HC1AQ96GY0 325 aa11.32□□□□□ -0.6
DDX41-208ENST00000507955 MINOS1-NBL1R4GNA1 71 aa11.32□□□□□ -0.6
DDX41-208ENST00000507955 FAM106CPP0CH98 169 aa11.31□□□□□ -0.6
DDX41-208ENST00000507955 UBE2E1P51965 193 aa11.31□□□□□ -0.6
DDX41-208ENST00000507955 HNRNPA3P51991 378 aaKnown RBP11.31□□□□□ -0.6
DDX41-208ENST00000507955 EBI3Q14213 229 aa11.31□□□□□ -0.6
DDX41-208ENST00000507955 LINC00173Q6ZV60 143 aa11.31□□□□□ -0.6
DDX41-208ENST00000507955 LAMTOR2Q9Y2Q5 125 aa11.31□□□□□ -0.6
DDX41-208ENST00000507955 FBN2P35556 2912 aa11.31□□□□□ -0.6
DDX41-208ENST00000507955 IGHV3-66A0A0C4DH42 116 aa11.31□□□□□ -0.6
DDX41-208ENST00000507955 SFTPCP11686 197 aa11.31□□□□□ -0.6
DDX41-208ENST00000507955 COL8A1P27658 744 aa11.31□□□□□ -0.6
DDX41-208ENST00000507955 HLA-DMBP28068 263 aa11.31□□□□□ -0.6
DDX41-208ENST00000507955 GPR183P32249 361 aa11.31□□□□□ -0.6
DDX41-208ENST00000507955 HBBP68871 147 aa11.31□□□□□ -0.6
DDX41-208ENST00000507955 UNQ5815/PRO19632Q6UWF5 114 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms