RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 RAB19A4D1S5 217 aa13.22□□□□□ -0.29
RNF4-209ENST00000507784 FAM74A7A6NL05 159 aa13.22□□□□□ -0.29
RNF4-209ENST00000507784 SRSF3P84103 164 aaKnown RBP13.22□□□□□ -0.29
RNF4-209ENST00000507784 PMS2P11Q13670 270 aa13.22□□□□□ -0.29
RNF4-209ENST00000507784 ZNF506Q5JVG8 444 aa13.22□□□□□ -0.29
RNF4-209ENST00000507784 WFDC3Q8IUB2 231 aa13.22□□□□□ -0.29
RNF4-209ENST00000507784 GBGT1Q8N5D6 347 aa13.22□□□□□ -0.29
RNF4-209ENST00000507784 LINC00482Q8N8I6 264 aa13.22□□□□□ -0.29
RNF4-209ENST00000507784 A0A087X0K7 114 aa13.21□□□□□ -0.29
RNF4-209ENST00000507784 PGPA6NDG6 321 aa13.21□□□□□ -0.29
RNF4-209ENST00000507784 SAP30O75446 220 aa13.21□□□□□ -0.29
RNF4-209ENST00000507784 TAGLN2P37802 199 aaKnown RBP13.21□□□□□ -0.29
RNF4-209ENST00000507784 ATP5G3P48201 142 aa13.21□□□□□ -0.29
RNF4-209ENST00000507784 SUMO1P63165 101 aaKnown RBP13.21□□□□□ -0.29
RNF4-209ENST00000507784 ICAM4Q14773 271 aa13.21□□□□□ -0.29
RNF4-209ENST00000507784 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.21□□□□□ -0.29
RNF4-209ENST00000507784 CITED4Q96RK1 184 aa13.21□□□□□ -0.29
RNF4-209ENST00000507784 Q9H3A6 140 aa13.21□□□□□ -0.29
RNF4-209ENST00000507784 A0A1W2PRE2 83 aa13.2□□□□□ -0.3
RNF4-209ENST00000507784 C11orf94C9JXX5 98 aa13.2□□□□□ -0.3
RNF4-209ENST00000507784 DNASE2O00115 360 aaPredicted RBP13.2□□□□□ -0.3
RNF4-209ENST00000507784 SLC17A3O00476 420 aa13.2□□□□□ -0.3
RNF4-209ENST00000507784 TFPI2P48307 235 aa13.2□□□□□ -0.3
RNF4-209ENST00000507784 PSG9Q00887 426 aa13.2□□□□□ -0.3
RNF4-209ENST00000507784 RBPMS2Q6ZRY4 209 aaKnown RBP13.2□□□□□ -0.3
RNF4-209ENST00000507784 EXOC3-AS1Q8N2X6 119 aa13.2□□□□□ -0.3
RNF4-209ENST00000507784 C16orf92Q96LL3 132 aa13.2□□□□□ -0.3
RNF4-209ENST00000507784 WNK1Q9H4A3 2382 aa13.19□□□□□ -0.3
RNF4-209ENST00000507784 NDUFB4O95168 129 aa13.19□□□□□ -0.3
RNF4-209ENST00000507784 SLC25A5P05141 298 aaKnown RBP13.19□□□□□ -0.3
RNF4-209ENST00000507784 MEOX2P50222 304 aa13.19□□□□□ -0.3
RNF4-209ENST00000507784 MEF2BQ02080 365 aaPredicted RBP13.19□□□□□ -0.3
RNF4-209ENST00000507784 DEFB114Q30KQ6 69 aa13.19□□□□□ -0.3
RNF4-209ENST00000507784 FAM90A2PQ658T7 463 aa13.19□□□□□ -0.3
RNF4-209ENST00000507784 IGFL4Q6B9Z1 124 aa13.19□□□□□ -0.3
RNF4-209ENST00000507784 AAMDCQ9H7C9 122 aa13.19□□□□□ -0.3
RNF4-209ENST00000507784 NRN1Q9NPD7 142 aa13.19□□□□□ -0.3
RNF4-209ENST00000507784 CD5P06127 495 aa13.18□□□□□ -0.3
RNF4-209ENST00000507784 CD33P20138 364 aa13.18□□□□□ -0.3
RNF4-209ENST00000507784 CEBPGP53567 150 aa13.18□□□□□ -0.3
RNF4-209ENST00000507784 PAFAH1B2P68402 229 aa13.18□□□□□ -0.3
RNF4-209ENST00000507784 PDE6HQ13956 83 aa13.18□□□□□ -0.3
RNF4-209ENST00000507784 SLC50A1Q9BRV3 221 aa13.18□□□□□ -0.3
RNF4-209ENST00000507784 OTORQ9NRC9 128 aa13.18□□□□□ -0.3
RNF4-209ENST00000507784 RPH3ALQ9UNE2 315 aa13.18□□□□□ -0.3
RNF4-209ENST00000507784 ARL2-SNX15V9GYD0 113 aa13.18□□□□□ -0.3
RNF4-209ENST00000507784 GGTLC3B5MD39 225 aa13.17□□□□□ -0.3
RNF4-209ENST00000507784 HLA-DMBP28068 263 aa13.17□□□□□ -0.3
RNF4-209ENST00000507784 UQCC3Q6UW78 93 aa13.17□□□□□ -0.3
RNF4-209ENST00000507784 LYPD1Q8N2G4 141 aa13.17□□□□□ -0.3
RNF4-209ENST00000507784 CMTM2Q8TAZ6 248 aa13.17□□□□□ -0.3
RNF4-209ENST00000507784 TXNDC17Q9BRA2 123 aa13.17□□□□□ -0.3
RNF4-209ENST00000507784 NKX6-2Q9C056 277 aaPredicted RBP13.17□□□□□ -0.3
RNF4-209ENST00000507784 MS4A6AQ9H2W1 248 aa13.17□□□□□ -0.3
RNF4-209ENST00000507784 SIGLEC8Q9NYZ4 499 aa13.17□□□□□ -0.3
RNF4-209ENST00000507784 ZNF253O75346 499 aa13.16□□□□□ -0.3
RNF4-209ENST00000507784 SRP19P09132 144 aaKnown RBP13.16□□□□□ -0.3
RNF4-209ENST00000507784 CD81P60033 236 aa13.16□□□□□ -0.3
RNF4-209ENST00000507784 CD300EQ496F6 205 aaPredicted RBP13.16□□□□□ -0.3
RNF4-209ENST00000507784 MDFIQ99750 246 aa13.16□□□□□ -0.3
RNF4-209ENST00000507784 ZNF331Q9NQX6 463 aaPredicted RBP13.16□□□□□ -0.3
RNF4-209ENST00000507784 C9JQL5 133 aa13.15□□□□□ -0.3
RNF4-209ENST00000507784 F6UZH7 168 aa13.15□□□□□ -0.3
RNF4-209ENST00000507784 PRB4P10163 310 aaPredicted RBP13.15□□□□□ -0.3
RNF4-209ENST00000507784 ID1P41134 155 aa13.15□□□□□ -0.3
RNF4-209ENST00000507784 GNG5P63218 68 aa13.15□□□□□ -0.3
RNF4-209ENST00000507784 TMEM61Q8N0U2 210 aa13.15□□□□□ -0.3
RNF4-209ENST00000507784 EIF4E3Q8N5X7 224 aaKnown RBP13.15□□□□□ -0.3
RNF4-209ENST00000507784 RNF182Q8N6D2 247 aa13.15□□□□□ -0.3
RNF4-209ENST00000507784 SPATA3Q8NHX4 192 aa13.15□□□□□ -0.3
RNF4-209ENST00000507784 LINC00052Q96N35 136 aa13.15□□□□□ -0.3
RNF4-209ENST00000507784 FBN1P35555 2871 aaKnown RBP13.14□□□□□ -0.31
RNF4-209ENST00000507784 TRAV8-2A0A0B4J237 113 aa13.14□□□□□ -0.31
RNF4-209ENST00000507784 SCO2A0A1W2PP80 73 aa13.14□□□□□ -0.31
RNF4-209ENST00000507784 PDE6DO43924 150 aa13.14□□□□□ -0.31
RNF4-209ENST00000507784 CSN1S1P47710 185 aa13.14□□□□□ -0.31
RNF4-209ENST00000507784 GUCA2BQ16661 112 aa13.14□□□□□ -0.31
RNF4-209ENST00000507784 SMDT1Q9H4I9 107 aa13.14□□□□□ -0.31
RNF4-209ENST00000507784 ATRQ13535 2644 aa13.13□□□□□ -0.31
RNF4-209ENST00000507784 TRAV25A0A0B4J276 109 aa13.13□□□□□ -0.31
RNF4-209ENST00000507784 IZUMO1RA6ND01 250 aa13.13□□□□□ -0.31
RNF4-209ENST00000507784 TSPAN4O14817 238 aa13.13□□□□□ -0.31
RNF4-209ENST00000507784 PSG3Q16557 428 aa13.13□□□□□ -0.31
RNF4-209ENST00000507784 C9orf66Q5T8R8 295 aa13.13□□□□□ -0.31
RNF4-209ENST00000507784 CCDC28AQ8IWP9 274 aa13.13□□□□□ -0.31
RNF4-209ENST00000507784 C5orf17Q8NAS9 161 aa13.13□□□□□ -0.31
RNF4-209ENST00000507784 SLC35B3Q9H1N7 401 aa13.13□□□□□ -0.31
RNF4-209ENST00000507784 EPDR1Q9UM22 224 aa13.13□□□□□ -0.31
RNF4-209ENST00000507784 PRELID1Q9Y255 219 aa13.13□□□□□ -0.31
RNF4-209ENST00000507784 ZNF705FA8MVS1 300 aaPredicted RBP13.12□□□□□ -0.31
RNF4-209ENST00000507784 K7EQG2 157 aa13.12□□□□□ -0.31
RNF4-209ENST00000507784 M0R3E3 92 aa13.12□□□□□ -0.31
RNF4-209ENST00000507784 ISLRO14498 428 aa13.12□□□□□ -0.31
RNF4-209ENST00000507784 SOCS3O14543 225 aa13.12□□□□□ -0.31
RNF4-209ENST00000507784 SFTA3P0C7M3 94 aa13.12□□□□□ -0.31
RNF4-209ENST00000507784 RIPPLY3P57055 190 aa13.12□□□□□ -0.31
RNF4-209ENST00000507784 ZNF674Q2M3X9 581 aa13.12□□□□□ -0.31
RNF4-209ENST00000507784 SAMD13Q5VXD3 122 aa13.12□□□□□ -0.31
RNF4-209ENST00000507784 CYB561D1Q8N8Q1 229 aa13.12□□□□□ -0.31
RNF4-209ENST00000507784 ZNF738Q8NE65 137 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms