RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 GDF5OSQ5U4N7 250 aa9.7□□□□□ -0.86
DDR1-260ENST00000507533 TMEM144Q7Z5S9 345 aa9.7□□□□□ -0.86
DDR1-260ENST00000507533 TRGV9Q99603 122 aa9.7□□□□□ -0.86
DDR1-260ENST00000507533 KRTAP1-5Q9BYS1 174 aa9.7□□□□□ -0.86
DDR1-260ENST00000507533 Q9H8V8 135 aa9.7□□□□□ -0.86
DDR1-260ENST00000507533 LYRM2Q9NU23 88 aaPredicted RBP9.7□□□□□ -0.86
DDR1-260ENST00000507533 IGKV1OR2-108A0A075B7D4 117 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 FNDC10F2Z333 226 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 F5H768 121 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 HNRNPCP07910 306 aaKnown RBP eCLIP9.69□□□□□ -0.86
DDR1-260ENST00000507533 PSG1P11464 419 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 DEFB1P60022 68 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 RRAS2P62070 204 aaPredicted RBP9.69□□□□□ -0.86
DDR1-260ENST00000507533 AKR1C1Q04828 323 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 ARL16Q0P5N6 197 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 FCN2Q15485 313 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 RRN3P1Q2M238 152 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 LRRC37A5PQ49AS3 106 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 TTC32Q5I0X7 151 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 C1orf158Q8N1D5 194 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 TMEM252Q8N6L7 170 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 ZNF709Q8N972 641 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 PPP1R1CQ8WVI7 109 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 GGACTQ9BVM4 153 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 NRN1Q9NPD7 142 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 MDFICQ9P1T7 246 aa9.69□□□□□ -0.86
DDR1-260ENST00000507533 SMCO3A2RU48 225 aa9.68□□□□□ -0.86
DDR1-260ENST00000507533 E5RGE8 158 aa9.68□□□□□ -0.86
DDR1-260ENST00000507533 H0YIZ8 118 aa9.68□□□□□ -0.86
DDR1-260ENST00000507533 CST7O76096 145 aa9.68□□□□□ -0.86
DDR1-260ENST00000507533 CXCL3P19876 107 aa9.68□□□□□ -0.86
DDR1-260ENST00000507533 SULT1A1P50225 295 aa9.68□□□□□ -0.86
DDR1-260ENST00000507533 ZNF90Q03938 601 aa9.68□□□□□ -0.86
DDR1-260ENST00000507533 CLINT1Q14677 625 aa9.68□□□□□ -0.86
DDR1-260ENST00000507533 SSX7Q7RTT5 188 aa9.68□□□□□ -0.86
DDR1-260ENST00000507533 OR51G1Q8NGK1 321 aa9.68□□□□□ -0.86
DDR1-260ENST00000507533 SLC35B3Q9H1N7 401 aa9.68□□□□□ -0.86
DDR1-260ENST00000507533 NPVFQ9HCQ7 196 aa9.68□□□□□ -0.86
DDR1-260ENST00000507533 OR5AC2Q9NZP5 309 aa9.68□□□□□ -0.86
DDR1-260ENST00000507533 IGSF23A1L1A6 192 aa9.67□□□□□ -0.86
DDR1-260ENST00000507533 MPC2O95563 127 aa9.67□□□□□ -0.86
DDR1-260ENST00000507533 IL4P05112 153 aa9.67□□□□□ -0.86
DDR1-260ENST00000507533 PET100P0DJ07 73 aa9.67□□□□□ -0.86
DDR1-260ENST00000507533 FUSP35637 526 aaKnown RBP eCLIP9.67□□□□□ -0.86
DDR1-260ENST00000507533 SLC38A11Q08AI6 406 aa9.67□□□□□ -0.86
DDR1-260ENST00000507533 OR2F1Q13607 317 aa9.67□□□□□ -0.86
DDR1-260ENST00000507533 STX12Q86Y82 276 aa9.67□□□□□ -0.86
DDR1-260ENST00000507533 OR11H7Q8NGC8 314 aa9.67□□□□□ -0.86
DDR1-260ENST00000507533 OR4B1Q8NGF8 309 aa9.67□□□□□ -0.86
DDR1-260ENST00000507533 RNF125Q96EQ8 232 aa9.67□□□□□ -0.86
DDR1-260ENST00000507533 SLC25A31Q9H0C2 315 aa9.67□□□□□ -0.86
DDR1-260ENST00000507533 SAV1Q9H4B6 383 aaPredicted RBP9.67□□□□□ -0.86
DDR1-260ENST00000507533 PGPEP1Q9NXJ5 209 aa9.67□□□□□ -0.86
DDR1-260ENST00000507533 HMCN2Q8NDA2 5059 aa9.66□□□□□ -0.86
DDR1-260ENST00000507533 CFDP00746 253 aaPredicted RBP9.66□□□□□ -0.86
DDR1-260ENST00000507533 SMR3BP02814 79 aaPredicted RBP9.66□□□□□ -0.86
DDR1-260ENST00000507533 DEFB130BP0DP73 79 aa9.66□□□□□ -0.86
DDR1-260ENST00000507533 DEFB130AP0DP74 79 aa9.66□□□□□ -0.86
DDR1-260ENST00000507533 S100A11P31949 105 aa9.66□□□□□ -0.86
DDR1-260ENST00000507533 USF2Q15853 346 aaPredicted RBP9.66□□□□□ -0.86
DDR1-260ENST00000507533 SIGLEC15Q6ZMC9 328 aa9.66□□□□□ -0.86
DDR1-260ENST00000507533 FOXI2Q6ZQN5 318 aa9.66□□□□□ -0.86
DDR1-260ENST00000507533 LINC00052Q96N35 136 aa9.66□□□□□ -0.86
DDR1-260ENST00000507533 CLUHP3Q96NS8 147 aa9.66□□□□□ -0.86
DDR1-260ENST00000507533 Q9H3A6 140 aa9.66□□□□□ -0.86
DDR1-260ENST00000507533 LYRM9A8MSI8 78 aa9.65□□□□□ -0.86
DDR1-260ENST00000507533 HBG1P69891 147 aa9.65□□□□□ -0.86
DDR1-260ENST00000507533 HBG2P69892 147 aa9.65□□□□□ -0.86
DDR1-260ENST00000507533 PSG9Q00887 426 aa9.65□□□□□ -0.86
DDR1-260ENST00000507533 ATP6V1FQ16864 119 aa9.65□□□□□ -0.86
DDR1-260ENST00000507533 TEPPQ6URK8 271 aa9.65□□□□□ -0.86
DDR1-260ENST00000507533 CYP2G1PQ6ZSU1 146 aa9.65□□□□□ -0.86
DDR1-260ENST00000507533 BPIFCQ8NFQ6 507 aa9.65□□□□□ -0.86
DDR1-260ENST00000507533 RNF141Q8WVD5 230 aa9.65□□□□□ -0.86
DDR1-260ENST00000507533 PBDC1Q9BVG4 233 aa9.65□□□□□ -0.86
DDR1-260ENST00000507533 GIPP09681 153 aaPredicted RBP9.64□□□□□ -0.87
DDR1-260ENST00000507533 GATA2P23769 480 aaPredicted RBP9.64□□□□□ -0.87
DDR1-260ENST00000507533 LYZP61626 148 aa9.64□□□□□ -0.87
DDR1-260ENST00000507533 SELENOTP62341 195 aa9.64□□□□□ -0.87
DDR1-260ENST00000507533 VWC2Q2TAL6 325 aa9.64□□□□□ -0.87
DDR1-260ENST00000507533 TMEM182Q6ZP80 229 aaPredicted RBP9.64□□□□□ -0.87
DDR1-260ENST00000507533 ASB13Q8WXK3 278 aa9.64□□□□□ -0.87
DDR1-260ENST00000507533 C17orf77Q96MU5 243 aa9.64□□□□□ -0.87
DDR1-260ENST00000507533 TMEM208Q9BTX3 173 aa9.64□□□□□ -0.87
DDR1-260ENST00000507533 TMEM147Q9BVK8 224 aa9.64□□□□□ -0.87
DDR1-260ENST00000507533 UQCC1Q9NVA1 299 aa9.64□□□□□ -0.87
DDR1-260ENST00000507533 MBD2Q9UBB5 411 aa9.64□□□□□ -0.87
DDR1-260ENST00000507533 PFDN2Q9UHV9 154 aa9.64□□□□□ -0.87
DDR1-260ENST00000507533 A0A1W2PPQ1 181 aa9.63□□□□□ -0.87
DDR1-260ENST00000507533 FAM229AH3BQW9 127 aa9.63□□□□□ -0.87
DDR1-260ENST00000507533 BUB3O43684 328 aa9.63□□□□□ -0.87
DDR1-260ENST00000507533 PRM2P04554 102 aa9.63□□□□□ -0.87
DDR1-260ENST00000507533 ATP5G1P05496 136 aa9.63□□□□□ -0.87
DDR1-260ENST00000507533 NUP62P37198 522 aaPredicted RBP9.63□□□□□ -0.87
DDR1-260ENST00000507533 ATP5G3P48201 142 aa9.63□□□□□ -0.87
DDR1-260ENST00000507533 NHLH2Q02577 135 aa9.63□□□□□ -0.87
DDR1-260ENST00000507533 BAXQ07812 192 aa9.63□□□□□ -0.87
DDR1-260ENST00000507533 THAP6Q8TBB0 222 aa9.63□□□□□ -0.87
DDR1-260ENST00000507533 UHRF2Q96PU4 802 aa9.63□□□□□ -0.87
DDR1-260ENST00000507533 WDR83OSQ9Y284 106 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms