RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 C16orf92Q96LL3 132 aa6.3□□□□□ -1.4
PDGFC-205ENST00000506880 ODF3Q96PU9 254 aa6.3□□□□□ -1.4
PDGFC-205ENST00000506880 SCRT1Q9BWW7 348 aa6.3□□□□□ -1.4
PDGFC-205ENST00000506880 ACTR3CQ9C0K3 210 aaPredicted RBP6.3□□□□□ -1.4
PDGFC-205ENST00000506880 AAMDCQ9H7C9 122 aa6.3□□□□□ -1.4
PDGFC-205ENST00000506880 SLC25A22Q9H936 323 aa6.3□□□□□ -1.4
PDGFC-205ENST00000506880 MAP6D1Q9H9H5 199 aa6.3□□□□□ -1.4
PDGFC-205ENST00000506880 WFDC1Q9HC57 220 aa6.3□□□□□ -1.4
PDGFC-205ENST00000506880 ZNF331Q9NQX6 463 aaPredicted RBP6.3□□□□□ -1.4
PDGFC-205ENST00000506880 TMEM167BQ9NRX6 74 aa6.3□□□□□ -1.4
PDGFC-205ENST00000506880 IGHV3OR16-8A0A075B7F1 116 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 CTXND1A0A1B0GTU2 59 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 RBAKDNA6NC62 111 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 HMGB3O15347 200 aaKnown RBP6.29□□□□□ -1.4
PDGFC-205ENST00000506880 CXorf1O96002 111 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 SLC25A5P05141 298 aaKnown RBP6.29□□□□□ -1.4
PDGFC-205ENST00000506880 NMBP08949 121 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 STAG3L2P0CL84 134 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 STAG3L3P0CL85 134 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 HLA-DRB4P13762 266 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 TAGLN2P37802 199 aaKnown RBP6.29□□□□□ -1.4
PDGFC-205ENST00000506880 CDC34P49427 236 aaPredicted RBP6.29□□□□□ -1.4
PDGFC-205ENST00000506880 PMS2P11Q13670 270 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 RPL7L1Q6DKI1 246 aaKnown RBP6.29□□□□□ -1.4
PDGFC-205ENST00000506880 EBLN2Q6P2I7 272 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 TMUB2Q71RG4 321 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 WFDC3Q8IUB2 231 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 STHQ8IWL8 128 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 OR11H4Q8NGC9 324 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 OR10G4Q8NGN3 311 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 OR10G9Q8NGN4 311 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 OR10G7Q8NGN6 311 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 LRRC20Q8TCA0 184 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 RXFP4Q8TDU9 374 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 SAT2Q96F10 170 aaPredicted RBP6.29□□□□□ -1.4
PDGFC-205ENST00000506880 PRR25Q96S07 402 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 TXNDC17Q9BRA2 123 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 RSG1Q9BU20 258 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 PAXXQ9BUH6 204 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 SMIM3Q9BZL3 60 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 OR51M1Q9H341 326 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 ZMAT4Q9H898 229 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 CYTL1Q9NRR1 136 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 PPP1R14DQ9NXH3 145 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 LENEPQ9Y5L5 61 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 HLA-DRB4X5D2U9 266 aa6.29□□□□□ -1.4
PDGFC-205ENST00000506880 TRBV19A0A075B6N1 114 aa6.28□□□□□ -1.4
PDGFC-205ENST00000506880 NDUFS6O75380 124 aaKnown RBP6.28□□□□□ -1.4
PDGFC-205ENST00000506880 CD7P09564 240 aa6.28□□□□□ -1.4
PDGFC-205ENST00000506880 NBEAP1P0C6P0 100 aa6.28□□□□□ -1.4
PDGFC-205ENST00000506880 FHITP49789 147 aa6.28□□□□□ -1.4
PDGFC-205ENST00000506880 PSG3Q16557 428 aa6.28□□□□□ -1.4
PDGFC-205ENST00000506880 HSD17B11Q8NBQ5 300 aa6.28□□□□□ -1.4
PDGFC-205ENST00000506880 TMED6Q8WW62 240 aa6.28□□□□□ -1.4
PDGFC-205ENST00000506880 FAM167A-AS1Q96KT0 104 aa6.28□□□□□ -1.4
PDGFC-205ENST00000506880 UHRF2Q96PU4 802 aa6.28□□□□□ -1.4
PDGFC-205ENST00000506880 C20orf144Q9BQM9 153 aa6.28□□□□□ -1.4
PDGFC-205ENST00000506880 SPATA25Q9BR10 227 aa6.28□□□□□ -1.4
PDGFC-205ENST00000506880 TM2D3Q9BRN9 247 aa6.28□□□□□ -1.4
PDGFC-205ENST00000506880 ZNF471Q9BX82 626 aaPredicted RBP6.28□□□□□ -1.4
PDGFC-205ENST00000506880 SAV1Q9H4B6 383 aaPredicted RBP6.28□□□□□ -1.4
PDGFC-205ENST00000506880 SRD5A3Q9H8P0 318 aa6.28□□□□□ -1.4
PDGFC-205ENST00000506880 DOK5Q9P104 306 aa6.28□□□□□ -1.4
PDGFC-205ENST00000506880 IGHV3OR16-13A0A075B7E8 117 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 IGHV3-49A0A0A0MS15 119 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 IGHV3-74A0A0B4J1X5 117 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 TRAV1-1A0A0B4J248 108 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 A0A1W2PRE2 83 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 OR7C2O60412 319 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 HBE1P02100 147 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 EDN2P20800 178 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 TSPOP30536 169 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 CSN1S1P47710 185 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 DEFB131AP59861 70 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 RAB2AP61019 212 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 TRPT1Q86TN4 253 aaKnown RBP6.27□□□□□ -1.41
PDGFC-205ENST00000506880 RPP25LQ8N5L8 163 aaKnown RBP6.27□□□□□ -1.41
PDGFC-205ENST00000506880 RNF141Q8WVD5 230 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 SLC25A2Q9BXI2 301 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 CSTL1Q9H114 145 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 RFNGQ9Y644 331 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 AGRNO00468 2067 aa6.27□□□□□ -1.41
PDGFC-205ENST00000506880 IGHV3-66A0A0C4DH42 116 aa6.26□□□□□ -1.41
PDGFC-205ENST00000506880 A0A0J9YX75 114 aa6.26□□□□□ -1.41
PDGFC-205ENST00000506880 SMIM9A6NGZ8 99 aa6.26□□□□□ -1.41
PDGFC-205ENST00000506880 H3BMM0 161 aa6.26□□□□□ -1.41
PDGFC-205ENST00000506880 K7EQM0 130 aa6.26□□□□□ -1.41
PDGFC-205ENST00000506880 FRMD6-AS1P0C7T7 363 aa6.26□□□□□ -1.41
PDGFC-205ENST00000506880 ZNF688P0C7X2 276 aa6.26□□□□□ -1.41
PDGFC-205ENST00000506880 UBE2L3P68036 154 aaKnown RBP6.26□□□□□ -1.41
PDGFC-205ENST00000506880 DEFB121Q5J5C9 76 aa6.26□□□□□ -1.41
PDGFC-205ENST00000506880 PSMG4Q5JS54 123 aa6.26□□□□□ -1.41
PDGFC-205ENST00000506880 TMEM256Q8N2U0 113 aa6.26□□□□□ -1.41
PDGFC-205ENST00000506880 GBGT1Q8N5D6 347 aa6.26□□□□□ -1.41
PDGFC-205ENST00000506880 OR10J6PQ8NGY7 276 aa6.26□□□□□ -1.41
PDGFC-205ENST00000506880 MBD3L1Q8WWY6 194 aa6.26□□□□□ -1.41
PDGFC-205ENST00000506880 RAB24Q969Q5 203 aa6.26□□□□□ -1.41
PDGFC-205ENST00000506880 LINC00477Q96M19 166 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms