RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 NKX2-5P52952 324 aaPredicted RBP9.52□□□□□ -0.89
TCOF1-210ENST00000506767 TAS2R45P59539 299 aa9.52□□□□□ -0.89
TCOF1-210ENST00000506767 DEFB131AP59861 70 aa9.52□□□□□ -0.89
TCOF1-210ENST00000506767 SNRPD3P62318 126 aaKnown RBP9.52□□□□□ -0.89
TCOF1-210ENST00000506767 ZNF124Q15973 351 aa9.52□□□□□ -0.89
TCOF1-210ENST00000506767 GUK1Q16774 197 aa9.52□□□□□ -0.89
TCOF1-210ENST00000506767 DEFB121Q5J5C9 76 aa9.52□□□□□ -0.89
TCOF1-210ENST00000506767 FAM122CQ6P4D5 195 aa9.52□□□□□ -0.89
TCOF1-210ENST00000506767 LCN15Q6UWW0 184 aa9.52□□□□□ -0.89
TCOF1-210ENST00000506767 LINC00322Q6ZN03 302 aaPredicted RBP9.52□□□□□ -0.89
TCOF1-210ENST00000506767 SLC51BQ86UW2 128 aa9.52□□□□□ -0.89
TCOF1-210ENST00000506767 APRG1Q8IVJ8 170 aa9.52□□□□□ -0.89
TCOF1-210ENST00000506767 C16orf92Q96LL3 132 aa9.52□□□□□ -0.89
TCOF1-210ENST00000506767 OR51M1Q9H341 326 aa9.52□□□□□ -0.89
TCOF1-210ENST00000506767 TRBV19A0A075B6N1 114 aa9.51□□□□□ -0.89
TCOF1-210ENST00000506767 ZNF253O75346 499 aa9.51□□□□□ -0.89
TCOF1-210ENST00000506767 EIF3GO75821 320 aaKnown RBP eCLIP9.51□□□□□ -0.89
TCOF1-210ENST00000506767 SNRPCP09234 159 aaKnown RBP9.51□□□□□ -0.89
TCOF1-210ENST00000506767 STAG3L2P0CL84 134 aa9.51□□□□□ -0.89
TCOF1-210ENST00000506767 STAG3L3P0CL85 134 aa9.51□□□□□ -0.89
TCOF1-210ENST00000506767 C4BPBP20851 252 aa9.51□□□□□ -0.89
TCOF1-210ENST00000506767 KHDC3LQ587J8 217 aa9.51□□□□□ -0.89
TCOF1-210ENST00000506767 PSMG4Q5JS54 123 aa9.51□□□□□ -0.89
TCOF1-210ENST00000506767 AKR1C8PQ5T2L2 129 aa9.51□□□□□ -0.89
TCOF1-210ENST00000506767 RNF141Q8WVD5 230 aa9.51□□□□□ -0.89
TCOF1-210ENST00000506767 RAB24Q969Q5 203 aa9.51□□□□□ -0.89
TCOF1-210ENST00000506767 FXYD5Q96DB9 178 aa9.51□□□□□ -0.89
TCOF1-210ENST00000506767 C20orf173Q96LM9 149 aa9.51□□□□□ -0.89
TCOF1-210ENST00000506767 SLC50A1Q9BRV3 221 aa9.51□□□□□ -0.89
TCOF1-210ENST00000506767 PAXXQ9BUH6 204 aa9.51□□□□□ -0.89
TCOF1-210ENST00000506767 SRD5A3Q9H8P0 318 aa9.51□□□□□ -0.89
TCOF1-210ENST00000506767 ZNF331Q9NQX6 463 aaPredicted RBP9.51□□□□□ -0.89
TCOF1-210ENST00000506767 RBMY1BA6NDE4 496 aaKnown RBP9.5□□□□□ -0.89
TCOF1-210ENST00000506767 RBMY1EA6NEQ0 496 aaKnown RBP9.5□□□□□ -0.89
TCOF1-210ENST00000506767 SLC17A3O00476 420 aa9.5□□□□□ -0.89
TCOF1-210ENST00000506767 NDUFB4O95168 129 aa9.5□□□□□ -0.89
TCOF1-210ENST00000506767 RBMY1DP0C7P1 496 aaKnown RBP9.5□□□□□ -0.89
TCOF1-210ENST00000506767 FRMD6-AS1P0C7T7 363 aa9.5□□□□□ -0.89
TCOF1-210ENST00000506767 PDE6HQ13956 83 aa9.5□□□□□ -0.89
TCOF1-210ENST00000506767 ZNF726P1Q15940 193 aa9.5□□□□□ -0.89
TCOF1-210ENST00000506767 IGFL4Q6B9Z1 124 aa9.5□□□□□ -0.89
TCOF1-210ENST00000506767 PQLC2Q6ZP29 291 aa9.5□□□□□ -0.89
TCOF1-210ENST00000506767 SSX7Q7RTT5 188 aa9.5□□□□□ -0.89
TCOF1-210ENST00000506767 ACTR3CQ9C0K3 210 aaPredicted RBP9.5□□□□□ -0.89
TCOF1-210ENST00000506767 CTXND1A0A1B0GTU2 59 aa9.49□□□□□ -0.89
TCOF1-210ENST00000506767 UMAD1C9J7I0 102 aa9.49□□□□□ -0.89
TCOF1-210ENST00000506767 H3BTX0 84 aa9.49□□□□□ -0.89
TCOF1-210ENST00000506767 OR7C2O60412 319 aa9.49□□□□□ -0.89
TCOF1-210ENST00000506767 OR10J4P0C629 311 aa9.49□□□□□ -0.89
TCOF1-210ENST00000506767 NBEAP1P0C6P0 100 aa9.49□□□□□ -0.89
TCOF1-210ENST00000506767 SUN5Q8TC36 379 aa9.49□□□□□ -0.89
TCOF1-210ENST00000506767 LRRC20Q8TCA0 184 aa9.49□□□□□ -0.89
TCOF1-210ENST00000506767 TMED6Q8WW62 240 aa9.49□□□□□ -0.89
TCOF1-210ENST00000506767 LINC00052Q96N35 136 aa9.49□□□□□ -0.89
TCOF1-210ENST00000506767 TUBA4BQ9H853 241 aa9.49□□□□□ -0.89
TCOF1-210ENST00000506767 HMGB3O15347 200 aaKnown RBP9.48□□□□□ -0.89
TCOF1-210ENST00000506767 HLA-DMBP28068 263 aa9.48□□□□□ -0.89
TCOF1-210ENST00000506767 PSG3Q16557 428 aa9.48□□□□□ -0.89
TCOF1-210ENST00000506767 EIF5AL1Q6IS14 154 aaKnown RBP9.48□□□□□ -0.89
TCOF1-210ENST00000506767 RNF182Q8N6D2 247 aa9.48□□□□□ -0.89
TCOF1-210ENST00000506767 SAV1Q9H4B6 383 aaPredicted RBP9.48□□□□□ -0.89
TCOF1-210ENST00000506767 CLEC5AQ9NY25 188 aa9.48□□□□□ -0.89
TCOF1-210ENST00000506767 BOLA1Q9Y3E2 137 aa9.48□□□□□ -0.89
TCOF1-210ENST00000506767 KNCNA6PVL3 124 aa9.47□□□□□ -0.89
TCOF1-210ENST00000506767 CXorf1O96002 111 aa9.47□□□□□ -0.89
TCOF1-210ENST00000506767 ARL14EPLP0DKL9 152 aa9.47□□□□□ -0.89
TCOF1-210ENST00000506767 FHITP49789 147 aa9.47□□□□□ -0.89
TCOF1-210ENST00000506767 DEFB1P60022 68 aa9.47□□□□□ -0.89
TCOF1-210ENST00000506767 UBE2L3P68036 154 aaKnown RBP9.47□□□□□ -0.89
TCOF1-210ENST00000506767 PSG9Q00887 426 aa9.47□□□□□ -0.89
TCOF1-210ENST00000506767 DPPA3Q6W0C5 159 aa9.47□□□□□ -0.89
TCOF1-210ENST00000506767 FOXI2Q6ZQN5 318 aa9.47□□□□□ -0.89
TCOF1-210ENST00000506767 BLNKQ8WV28 456 aa9.47□□□□□ -0.89
TCOF1-210ENST00000506767 B9D2Q9BPU9 175 aa9.47□□□□□ -0.89
TCOF1-210ENST00000506767 LOC102724200A0A096LPH7 203 aaPredicted RBP9.46□□□□□ -0.9
TCOF1-210ENST00000506767 A0A0J9YX75 114 aa9.46□□□□□ -0.9
TCOF1-210ENST00000506767 H3BMM0 161 aa9.46□□□□□ -0.9
TCOF1-210ENST00000506767 BOLA2-SMG1P6H3BVE0 249 aa9.46□□□□□ -0.9
TCOF1-210ENST00000506767 HLA-DRB4P13762 266 aa9.46□□□□□ -0.9
TCOF1-210ENST00000506767 GCHFRP30047 84 aa9.46□□□□□ -0.9
TCOF1-210ENST00000506767 ACTL10Q5JWF8 245 aa9.46□□□□□ -0.9
TCOF1-210ENST00000506767 GDF5OSQ5U4N7 250 aa9.46□□□□□ -0.9
TCOF1-210ENST00000506767 TRPT1Q86TN4 253 aaKnown RBP9.46□□□□□ -0.9
TCOF1-210ENST00000506767 LYPD1Q8N2G4 141 aa9.46□□□□□ -0.9
TCOF1-210ENST00000506767 MBD3L1Q8WWY6 194 aa9.46□□□□□ -0.9
TCOF1-210ENST00000506767 PHYHIPLQ96FC7 376 aa9.46□□□□□ -0.9
TCOF1-210ENST00000506767 CLUHP3Q96NS8 147 aa9.46□□□□□ -0.9
TCOF1-210ENST00000506767 HLA-DRB4X5D2U9 266 aa9.46□□□□□ -0.9
TCOF1-210ENST00000506767 PRKDCP78527 4128 aaKnown RBP9.46□□□□□ -0.9
TCOF1-210ENST00000506767 KIR2DL5BA0A0G2JN68 375 aa9.45□□□□□ -0.9
TCOF1-210ENST00000506767 KIR2DL5BA0A0G2JPC4 375 aa9.45□□□□□ -0.9
TCOF1-210ENST00000506767 A8MTW9 85 aa9.45□□□□□ -0.9
TCOF1-210ENST00000506767 F6UB75 175 aa9.45□□□□□ -0.9
TCOF1-210ENST00000506767 SULT1A2P50226 295 aa9.45□□□□□ -0.9
TCOF1-210ENST00000506767 RAB5CP51148 216 aa9.45□□□□□ -0.9
TCOF1-210ENST00000506767 HAGHQ16775 308 aa9.45□□□□□ -0.9
TCOF1-210ENST00000506767 SBSPONQ8IVN8 264 aa9.45□□□□□ -0.9
TCOF1-210ENST00000506767 STHQ8IWL8 128 aa9.45□□□□□ -0.9
TCOF1-210ENST00000506767 KIR2DL5AQ8N109 375 aa9.45□□□□□ -0.9
TCOF1-210ENST00000506767 EXOC3-AS1Q8N2X6 119 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms