RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 C7orf69Q9H7B7 122 aa6.09□□□□□ -1.43
NEDD9-208ENST00000504387 SIGLEC8Q9NYZ4 499 aa6.09□□□□□ -1.43
NEDD9-208ENST00000504387 TMEM265A0A087WTH1 108 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 PSMB11A5LHX3 300 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 GATA1P15976 413 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-208ENST00000504387 WT1P19544 449 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-208ENST00000504387 UFSP1Q6NVU6 142 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 C19orf24Q9BVV8 132 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 TMEM160Q9NX00 188 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 MSRB1Q9NZV6 116 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 H3BRM9 83 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 SMAD7O15105 426 aaKnown RBP6.08□□□□□ -1.44
NEDD9-208ENST00000504387 IGHV3-23P01764 117 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 SEC11AP67812 179 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 KLF17Q5JT82 389 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-208ENST00000504387 MBNL2Q5VZF2 373 aaKnown RBP6.08□□□□□ -1.44
NEDD9-208ENST00000504387 Q8TAT8 98 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 PRR7Q8TB68 274 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 PRELID3AQ96N28 172 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 MRPL32Q9BYC8 188 aaKnown RBP6.08□□□□□ -1.44
NEDD9-208ENST00000504387 KLK15Q9H2R5 256 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 MS4A6AQ9H2W1 248 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 ZNF71Q9NQZ8 489 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-208ENST00000504387 A0A1W2PPI3 338 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 F2RL2O00254 374 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 SPRY2O43597 315 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 SMIM13P0DJ93 91 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 FGF6P10767 208 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 KIR2DS2P43631 304 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 HSD52Q0P140 79 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 PLGLAQ15195 96 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 TWIST1Q15672 202 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 RASL11AQ6T310 242 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 LYZL1Q6UWQ5 148 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 ATP5L2Q7Z4Y8 100 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 SIGMAR1Q99720 223 aa6.08□□□□□ -1.44
NEDD9-208ENST00000504387 TRAV17A0A0B4J275 112 aa6.07□□□□□ -1.44
NEDD9-208ENST00000504387 CKS2P33552 79 aa6.07□□□□□ -1.44
NEDD9-208ENST00000504387 FAM162BQ5T6X4 162 aa6.07□□□□□ -1.44
NEDD9-208ENST00000504387 IFI27L1Q96BM0 104 aa6.07□□□□□ -1.44
NEDD9-208ENST00000504387 NDUFA4L2Q9NRX3 87 aa6.07□□□□□ -1.44
NEDD9-208ENST00000504387 A0A096LNJ9 63 aa6.07□□□□□ -1.44
NEDD9-208ENST00000504387 CGB1A6NKQ9 187 aa6.07□□□□□ -1.44
NEDD9-208ENST00000504387 FAM90A9PA6NNJ1 464 aa6.07□□□□□ -1.44
NEDD9-208ENST00000504387 RAB9AP51151 201 aa6.07□□□□□ -1.44
NEDD9-208ENST00000504387 MLST8Q9BVC4 326 aa6.07□□□□□ -1.44
NEDD9-208ENST00000504387 SPG11Q96JI7 2443 aa6.07□□□□□ -1.44
NEDD9-208ENST00000504387 NPIPB5A8MRT5 1133 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 Q86TA4 180 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 SVIPQ8NHG7 77 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 NDFIP1Q9BT67 221 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 RNF7Q9UBF6 113 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 COL12A1Q99715 3063 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 IGHV3OR16-13A0A075B7E8 117 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 TRAV26-1A0A087WT03 109 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 IGHV3-74A0A0B4J1X5 117 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 J3KRW8 73 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 NPYP01303 97 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 COX7A1P24310 79 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 MZT1Q08AG7 82 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 RIGQ13278 110 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 OR5AN1Q8NGI8 311 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 TMEM133Q9H2Q1 129 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 DYNLRB1Q9NP97 96 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 IGF2RP11717 2491 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 TNRC6BQ9UPQ9 1833 aaKnown RBP6.06□□□□□ -1.44
NEDD9-208ENST00000504387 IGKV2-40A0A087WW87 121 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-208ENST00000504387 C19orf71A6NCJ1 209 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 GAGE12HA6NDE8 117 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 PRR33A8MZF0 331 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 IGKV2D-40P01614 121 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-208ENST00000504387 SUB1P53999 127 aaKnown RBP eCLIP6.06□□□□□ -1.44
NEDD9-208ENST00000504387 ANXA2RQ3ZCQ2 193 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 C22orf34Q6ZV56 151 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 FOXC2Q99958 501 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 PRSS22Q9GZN4 317 aa6.06□□□□□ -1.44
NEDD9-208ENST00000504387 LYNX1G3V0Z9 82 aa6.05□□□□□ -1.44
NEDD9-208ENST00000504387 IGKV3-15P01624 115 aa6.05□□□□□ -1.44
NEDD9-208ENST00000504387 LYNX1P0DP58 116 aa6.05□□□□□ -1.44
NEDD9-208ENST00000504387 CRIP1P50238 77 aa6.05□□□□□ -1.44
NEDD9-208ENST00000504387 CKS1BP61024 79 aa6.05□□□□□ -1.44
NEDD9-208ENST00000504387 C3orf36Q3SXR2 165 aa6.05□□□□□ -1.44
NEDD9-208ENST00000504387 NEGR1Q7Z3B1 354 aa6.05□□□□□ -1.44
NEDD9-208ENST00000504387 ZNF714Q96N38 554 aa6.05□□□□□ -1.44
NEDD9-208ENST00000504387 HIGD1AQ9Y241 93 aa6.05□□□□□ -1.44
NEDD9-208ENST00000504387 ZNF785A8K8V0 405 aa6.05□□□□□ -1.44
NEDD9-208ENST00000504387 NDUFA3O95167 84 aa6.05□□□□□ -1.44
NEDD9-208ENST00000504387 HLA-DMBP28068 263 aa6.05□□□□□ -1.44
NEDD9-208ENST00000504387 ABHD17AQ96GS6 310 aa6.05□□□□□ -1.44
NEDD9-208ENST00000504387 FMC1Q96HJ9 113 aa6.05□□□□□ -1.44
NEDD9-208ENST00000504387 CHTOPQ9Y3Y2 248 aaKnown RBP6.05□□□□□ -1.44
NEDD9-208ENST00000504387 DCHS2Q6V1P9 2916 aa6.05□□□□□ -1.44
NEDD9-208ENST00000504387 AKAP13Q12802 2813 aa6.05□□□□□ -1.44
NEDD9-208ENST00000504387 NPIPB6E9PJ23 425 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 NDUFS7O75251 213 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 FSTL3O95633 263 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 ORM1P02763 201 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 FTH1P19P0C7X4 201 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 CT45A10P0DMU9 189 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 LEPP41159 167 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms