RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 FAM104BQ5XKR9 115 aa11.78□□□□□ -0.52
SNF8-203ENST00000504000 IGFBPL1Q8WX77 278 aa11.78□□□□□ -0.52
SNF8-203ENST00000504000 ABHD17AQ96GS6 310 aa11.78□□□□□ -0.52
SNF8-203ENST00000504000 DPM3Q9P2X0 92 aa11.78□□□□□ -0.52
SNF8-203ENST00000504000 TIMM23O14925 209 aa11.77□□□□□ -0.53
SNF8-203ENST00000504000 TOX4O94842 621 aa11.77□□□□□ -0.53
SNF8-203ENST00000504000 COX7A1P24310 79 aa11.77□□□□□ -0.53
SNF8-203ENST00000504000 FCGR2BP31994 310 aaPredicted RBP11.77□□□□□ -0.53
SNF8-203ENST00000504000 CEACAM3P40198 252 aa11.77□□□□□ -0.53
SNF8-203ENST00000504000 PCP4P48539 62 aa11.77□□□□□ -0.53
SNF8-203ENST00000504000 SEC11AP67812 179 aa11.77□□□□□ -0.53
SNF8-203ENST00000504000 SRSF2Q01130 221 aaKnown RBP11.77□□□□□ -0.53
SNF8-203ENST00000504000 LGALS9BQ3B8N2 356 aa11.77□□□□□ -0.53
SNF8-203ENST00000504000 LGALS9CQ6DKI2 356 aa11.77□□□□□ -0.53
SNF8-203ENST00000504000 Q71RC1 249 aaPredicted RBP11.77□□□□□ -0.53
SNF8-203ENST00000504000 CFHR4Q92496 578 aa11.77□□□□□ -0.53
SNF8-203ENST00000504000 RP1L1Q8IWN7 2480 aaPredicted RBP11.77□□□□□ -0.53
SNF8-203ENST00000504000 IGLV11-55A0A075B6I3 123 aa11.76□□□□□ -0.53
SNF8-203ENST00000504000 MUC21A0A0G2JKD1 596 aa11.76□□□□□ -0.53
SNF8-203ENST00000504000 MUC21A0A140T8X8 626 aa11.76□□□□□ -0.53
SNF8-203ENST00000504000 MFAP4P55083 255 aa11.76□□□□□ -0.53
SNF8-203ENST00000504000 ARF6P62330 175 aa11.76□□□□□ -0.53
SNF8-203ENST00000504000 MUC21Q5SSG8 566 aa11.76□□□□□ -0.53
SNF8-203ENST00000504000 ORMDL3Q8N138 153 aa11.76□□□□□ -0.53
SNF8-203ENST00000504000 ASPMQ8IZT6 3477 aa11.76□□□□□ -0.53
SNF8-203ENST00000504000 A0A096LNJ9 63 aa11.76□□□□□ -0.53
SNF8-203ENST00000504000 TMEM189A5PLL7 270 aa11.76□□□□□ -0.53
SNF8-203ENST00000504000 DLX1P56177 255 aa11.76□□□□□ -0.53
SNF8-203ENST00000504000 C2orf91Q6ZV80 131 aa11.76□□□□□ -0.53
SNF8-203ENST00000504000 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.75□□□□□ -0.53
SNF8-203ENST00000504000 GNG7O60262 68 aa11.75□□□□□ -0.53
SNF8-203ENST00000504000 PAX8Q06710 450 aa11.75□□□□□ -0.53
SNF8-203ENST00000504000 PSMG4Q5JS54 123 aa11.75□□□□□ -0.53
SNF8-203ENST00000504000 LYZL1Q6UWQ5 148 aa11.75□□□□□ -0.53
SNF8-203ENST00000504000 VKORC1Q9BQB6 163 aa11.75□□□□□ -0.53
SNF8-203ENST00000504000 SIGLEC8Q9NYZ4 499 aa11.75□□□□□ -0.53
SNF8-203ENST00000504000 EP300Q09472 2414 aaPredicted RBP11.75□□□□□ -0.53
SNF8-203ENST00000504000 BOD1L1Q8NFC6 3051 aa11.75□□□□□ -0.53
SNF8-203ENST00000504000 M0R3E3 92 aa11.74□□□□□ -0.53
SNF8-203ENST00000504000 SIVA1O15304 175 aa11.74□□□□□ -0.53
SNF8-203ENST00000504000 RPL7P18124 248 aaKnown RBP11.74□□□□□ -0.53
SNF8-203ENST00000504000 S100A7P31151 101 aa11.74□□□□□ -0.53
SNF8-203ENST00000504000 IFI27P40305 119 aaPredicted RBP11.74□□□□□ -0.53
SNF8-203ENST00000504000 C5orf64Q2M2E5 130 aa11.74□□□□□ -0.53
SNF8-203ENST00000504000 LDLRAD2Q5SZI1 272 aa11.74□□□□□ -0.53
SNF8-203ENST00000504000 ZNF562Q6V9R5 426 aa11.74□□□□□ -0.53
SNF8-203ENST00000504000 TTC9CQ8N5M4 171 aa11.74□□□□□ -0.53
SNF8-203ENST00000504000 PRELID3AQ96N28 172 aa11.74□□□□□ -0.53
SNF8-203ENST00000504000 FANCD2OSQ96PS1 177 aa11.74□□□□□ -0.53
SNF8-203ENST00000504000 PEF1Q9UBV8 284 aaKnown RBP11.74□□□□□ -0.53
SNF8-203ENST00000504000 ROS1P08922 2347 aa11.74□□□□□ -0.53
SNF8-203ENST00000504000 D6R8Y8 96 aa11.74□□□□□ -0.53
SNF8-203ENST00000504000 M0R1W7 72 aa11.74□□□□□ -0.53
SNF8-203ENST00000504000 SH2D1AO60880 128 aa11.74□□□□□ -0.53
SNF8-203ENST00000504000 THYN1Q9P016 225 aa11.74□□□□□ -0.53
SNF8-203ENST00000504000 TP73-AS1Q9UF72 201 aa11.74□□□□□ -0.53
SNF8-203ENST00000504000 ODF3BA8MYP8 253 aa11.73□□□□□ -0.53
SNF8-203ENST00000504000 SCGB2A1O75556 95 aa11.73□□□□□ -0.53
SNF8-203ENST00000504000 FGF6P10767 208 aa11.73□□□□□ -0.53
SNF8-203ENST00000504000 BMI1P35226 326 aa11.73□□□□□ -0.53
SNF8-203ENST00000504000 C8orf49Q96NF6 230 aa11.73□□□□□ -0.53
SNF8-203ENST00000504000 PRR25Q96S07 402 aa11.73□□□□□ -0.53
SNF8-203ENST00000504000 CNOT1A5YKK6 2376 aaKnown RBP11.73□□□□□ -0.53
SNF8-203ENST00000504000 ZGRF1Q86YA3 2104 aa11.73□□□□□ -0.53
SNF8-203ENST00000504000 A0A087X0K7 114 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 LINC01546A6NGU7 62 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 F8W735 103 aaPredicted RBP11.72□□□□□ -0.53
SNF8-203ENST00000504000 HBDP02042 147 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 PPBPP02775 128 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 FBXL19-AS1Q494R0 122 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 ZNF672Q499Z4 452 aaPredicted RBP11.72□□□□□ -0.53
SNF8-203ENST00000504000 TMEM97Q5BJF2 176 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 BOD1L2Q8IYS8 172 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 PIFOQ8TCI5 191 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 ONECUT1Q9UBC0 465 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 SH3BGRL2Q9UJC5 107 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 OR2T8A6NH00 312 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 LYNX1G3V0Z9 82 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 NCR2O95944 276 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 IGLC6P0CF74 106 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 LYNX1P0DP58 116 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 PRB3Q04118 309 aaPredicted RBP11.72□□□□□ -0.53
SNF8-203ENST00000504000 MRPL51Q4U2R6 128 aaKnown RBP11.72□□□□□ -0.53
SNF8-203ENST00000504000 OR9G4Q8NGQ1 327 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 MCRIP2Q9BUT9 160 aaKnown RBP11.72□□□□□ -0.53
SNF8-203ENST00000504000 CNFNQ9BYD5 112 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 PKDREJQ9NTG1 2253 aa11.72□□□□□ -0.53
SNF8-203ENST00000504000 OOSP1A8MZH6 123 aa11.71□□□□□ -0.53
SNF8-203ENST00000504000 H0Y8G0 127 aa11.71□□□□□ -0.53
SNF8-203ENST00000504000 PRTN3P24158 256 aa11.71□□□□□ -0.53
SNF8-203ENST00000504000 AMN1Q8IY45 258 aa11.71□□□□□ -0.53
SNF8-203ENST00000504000 PIP4P2Q8N4L2 257 aa11.71□□□□□ -0.53
SNF8-203ENST00000504000 TPPP3Q9BW30 176 aa11.71□□□□□ -0.53
SNF8-203ENST00000504000 C21orf62Q9NYP8 219 aa11.71□□□□□ -0.53
SNF8-203ENST00000504000 ABCA1O95477 2261 aa11.71□□□□□ -0.54
SNF8-203ENST00000504000 TMEM213A2RRL7 107 aa11.7□□□□□ -0.54
SNF8-203ENST00000504000 LINC01559Q495D7 138 aa11.7□□□□□ -0.54
SNF8-203ENST00000504000 AMMECR1LQ6DCA0 310 aa11.7□□□□□ -0.54
SNF8-203ENST00000504000 CCDC144NLQ6NUI1 221 aa11.7□□□□□ -0.54
SNF8-203ENST00000504000 C1orf122Q6ZSJ8 110 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms