RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 TET2Q6N021 2002 aaPredicted RBP2.25□□□□□ -2.05
NEDD4-204ENST00000503468 B5MCH6 92 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 CTSBP07858 339 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 SP1P08047 785 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 VDAC2P45880 294 aaPredicted RBP2.25□□□□□ -2.05
NEDD4-204ENST00000503468 HERVK_113P61574 105 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 ARL16Q0P5N6 197 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 C15orf53Q8NAA6 179 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 RPEQ96AT9 228 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 LINC00479Q96M42 142 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 DEFB118Q96PH6 123 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 VPS13AQ96RL7 3174 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 A0A087X0K7 114 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 SCO2A0A1W2PP80 73 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 A0A1W2PRU2 124 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 TMEM89A2RUT3 159 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 HIGD1CA8MV81 97 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 E9PLN8 166 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 PEX7O00628 323 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 RPL13AP40429 203 aaKnown RBP2.25□□□□□ -2.05
NEDD4-204ENST00000503468 TREML4Q6UXN2 200 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 LYPD1Q8N2G4 141 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 DRAM1Q8N682 238 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 SNRNP40Q96DI7 357 aaKnown RBP2.25□□□□□ -2.05
NEDD4-204ENST00000503468 MGST2Q99735 147 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 DNAH10Q8IVF4 4471 aa2.25□□□□□ -2.05
NEDD4-204ENST00000503468 ZGRF1Q86YA3 2104 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 ABCA4P78363 2273 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 A0A1W2PPI3 338 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 H3BT86 120 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 RPL8P62917 257 aaKnown RBP2.24□□□□□ -2.05
NEDD4-204ENST00000503468 NNATQ16517 81 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 CITED1Q99966 193 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 RASL11BQ9BPW5 248 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 RPP25Q9BUL9 199 aaKnown RBP2.24□□□□□ -2.05
NEDD4-204ENST00000503468 IGFLR1Q9H665 355 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 ZNF355PQ9NSJ1 428 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 KLRF1Q9NZS2 232 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 DPM2O94777 84 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 OR2H2O95918 312 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 CRYAAP02489 173 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 FAM106CPP0CH98 169 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 IFITM1P13164 125 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 PLNP26678 52 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 ERHP84090 104 aaKnown RBP2.24□□□□□ -2.05
NEDD4-204ENST00000503468 TBC1D28Q2M2D7 210 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 FAM106AQ4KMX7 169 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 Q6ZRM9 215 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 C17orf77Q96MU5 243 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 S1PR3Q99500 378 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 RNF5Q99942 180 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 FBXL15Q9H469 300 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 HIF1ANQ9NWT6 349 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 NHP2Q9NX24 153 aaKnown RBP2.24□□□□□ -2.05
NEDD4-204ENST00000503468 COL6A3P12111 3177 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 NOTCH3Q9UM47 2321 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 FABP5P3A8MUU1 101 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 IGLL5B9A064 214 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 SLC25A5P05141 298 aaKnown RBP2.24□□□□□ -2.05
NEDD4-204ENST00000503468 SCTP09683 121 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 TMEM177Q53S58 311 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 SLC35E4Q6ICL7 350 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 BADQ92934 168 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 ZNF714Q96N38 554 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 VSIRQ9H7M9 311 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 UBTD1Q9HAC8 227 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 ZNF256Q9Y2P7 627 aaPredicted RBP2.24□□□□□ -2.05
NEDD4-204ENST00000503468 MYMXA0A1B0GTQ4 84 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 C15orf62A8K5M9 175 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 K7ESM1 405 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 SYNGR3O43761 229 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 NPYP01303 97 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 CELA2AP08217 269 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 EMP1P54849 157 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 AMTNQ6UX39 209 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 C2orf91Q6ZV80 131 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 AAED1Q7RTV5 226 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 TMEM219Q86XT9 240 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 KIR3DL3Q8N743 410 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 STPG3Q8N7X2 389 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 NUP37Q8NFH4 326 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 IL1F10Q8WWZ1 152 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 TMEM158Q8WZ71 300 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 FMC1Q96HJ9 113 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 HDHD3Q9BSH5 251 aaPredicted RBP2.24□□□□□ -2.05
NEDD4-204ENST00000503468 CHAC1Q9BUX1 264 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 DEFB126Q9BYW3 111 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 TP73-AS1Q9UF72 201 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 LINC00312Q9Y6C7 94 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 CADP27708 2225 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 IGKV1D-13A0A0B4J2D9 117 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 A0A1B0GUS0 222 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 SRRM4A7MD48 611 aaKnown RBP2.24□□□□□ -2.05
NEDD4-204ENST00000503468 CNIH1O95406 144 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 IGKV1-13P0DP09 117 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 Q0VFX4 171 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 ZNF718Q3SXZ3 478 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 C2orf83Q53S99 150 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 MBNL2Q5VZF2 373 aaKnown RBP2.24□□□□□ -2.05
NEDD4-204ENST00000503468 OR11H6Q8NGC7 330 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms