RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 DUX3Q96PT4 197 aa3.82□□□□□ -1.8
NDFIP1-202ENST00000503388 MCRIP2Q9BUT9 160 aaKnown RBP3.82□□□□□ -1.8
NDFIP1-202ENST00000503388 VSIRQ9H7M9 311 aa3.82□□□□□ -1.8
NDFIP1-202ENST00000503388 PRDM6Q9NQX0 595 aa3.82□□□□□ -1.8
NDFIP1-202ENST00000503388 MRPL16Q9NX20 251 aaKnown RBP3.82□□□□□ -1.8
NDFIP1-202ENST00000503388 KLF12Q9Y4X4 402 aa3.82□□□□□ -1.8
NDFIP1-202ENST00000503388 RNF114Q9Y508 228 aa3.82□□□□□ -1.8
NDFIP1-202ENST00000503388 V9GYV3 84 aa3.82□□□□□ -1.8
NDFIP1-202ENST00000503388 A0A087WV48 116 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 K7EMT4 169 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 SH2D1AO60880 128 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 INSP01308 110 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 IGHV1-69P01742 117 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 PYYP10082 97 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 GZMBP10144 247 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 TEX43Q6ZNM6 134 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 Q6ZR03 302 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 DNAJC30Q96LL9 226 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 C11orf1Q9H5F2 150 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 PRKDCP78527 4128 aaKnown RBP3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 LOC107984156A0A0G2JMH3 177 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 A0A1B0GUS0 222 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 PMS2P5A8MQ11 134 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 LTAP01374 205 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 TTC32Q5I0X7 151 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 PYY3Q5JQD4 70 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 MEIG1Q5JSS6 88 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 TMEM170BQ5T4T1 132 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 ARL17AQ8IVW1 177 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 DMRTC2Q8IXT2 367 aaPredicted RBP3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 SSBP4Q9BWG4 385 aaPredicted RBP3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 TMEM160Q9NX00 188 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 MYMXA0A1B0GTQ4 84 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 SMAD7O15105 426 aaKnown RBP3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 CRYGCP07315 174 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 C3orf79P0CE67 100 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 IGLC1P0CG04 106 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 FOXA3P55318 350 aaPredicted RBP3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 SRSF6Q13247 344 aaKnown RBP3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 UBE2V1Q13404 147 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 ATXN8Q156A1 80 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 STHQ8IWL8 128 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 C18orf32Q8TCD1 76 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 HECTD4Q9Y4D8 3996 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 A0A087X0K7 114 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 IGHV3-21A0A0B4J1V1 117 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 TRAV25A0A0B4J276 109 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 A0A1B0GV90 55 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 PF4P02776 101 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 MSMBP08118 114 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 HLA-DRB4P13762 266 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 MDKP21741 143 aaPredicted RBP3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 GUSBP1Q15486 140 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 WDR86Q86TI4 376 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 KLHDC3Q9BQ90 382 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 HLA-DRB4X5D2U9 266 aa3.81□□□□□ -1.8
NDFIP1-202ENST00000503388 ALPK2Q86TB3 2170 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 CD7P09564 240 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 P0C879 139 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 SUMO2P61956 95 aaKnown RBP3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 LYZL1Q6UWQ5 148 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 SH2D6Q7Z4S9 175 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 C11orf53Q8IXP5 236 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 LY6G5BQ8NDX9 201 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 GLMPQ8WWB7 406 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 ODF3Q96PU9 254 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 A6NNC1 897 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 WFDC3Q8IUB2 231 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 DLX4Q92988 240 aaPredicted RBP3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 ZNF479Q96JC4 524 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 PRR25Q96S07 402 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 SCRT1Q9BWW7 348 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 HTTP42858 3142 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 TNRC6AQ8NDV7 1962 aaKnown RBP3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 KIR2DL5BA0A0G2JN68 375 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 KIR2DL5BA0A0G2JPC4 375 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 WIPF3A6NGB9 483 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 SLC25A20O43772 301 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 APOMO95445 188 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 RPL15P61313 204 aaKnown RBP3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 FAM201AQ5SY85 155 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 CFAP161Q6P656 301 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 KIR2DL5AQ8N109 375 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 FXYD5Q96DB9 178 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 LINC01587Q99440 93 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 ERG28Q9UKR5 140 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 FAM215AQ9Y5M1 114 aa3.8□□□□□ -1.8
NDFIP1-202ENST00000503388 C5orf63A6NC05 138 aa3.79□□□□□ -1.8
NDFIP1-202ENST00000503388 M0R2P5 195 aa3.79□□□□□ -1.8
NDFIP1-202ENST00000503388 NDUFA3O95167 84 aa3.79□□□□□ -1.8
NDFIP1-202ENST00000503388 COX8AP10176 69 aa3.79□□□□□ -1.8
NDFIP1-202ENST00000503388 ZNF726P1Q15940 193 aa3.79□□□□□ -1.8
NDFIP1-202ENST00000503388 MEGF9Q9H1U4 602 aa3.79□□□□□ -1.8
NDFIP1-202ENST00000503388 HIGD1BQ9P298 99 aa3.79□□□□□ -1.8
NDFIP1-202ENST00000503388 TRAV2A0A0B4J234 112 aa3.79□□□□□ -1.8
NDFIP1-202ENST00000503388 NCR2O95944 276 aa3.79□□□□□ -1.8
NDFIP1-202ENST00000503388 TGFAP01135 160 aa3.79□□□□□ -1.8
NDFIP1-202ENST00000503388 INAFM2P0DMQ5 153 aa3.79□□□□□ -1.8
NDFIP1-202ENST00000503388 IFITM1P13164 125 aa3.79□□□□□ -1.8
NDFIP1-202ENST00000503388 RNASE4P34096 147 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms