RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 MRPS12O15235 138 aaKnown RBP9.41□□□□□ -0.9
NUP54-202ENST00000502850 ZNF324O75467 553 aaPredicted RBP9.41□□□□□ -0.9
NUP54-202ENST00000502850 NDUFB8O95169 186 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 FRMD6-AS1P0C7T7 363 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 NDPQ00604 133 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 DMRTA1Q5VZB9 504 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 Q6ZWC4 215 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 PRNTQ86SH4 94 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 KIR2DL5AQ8N109 375 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 DYNAPQ8N1N2 210 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 EXOC3-AS1Q8N2X6 119 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 Q8N9W7 124 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 C14orf144Q96I85 54 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 ZNF414Q96IQ9 312 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 TBX15Q96SF7 602 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 RABAC1Q9UI14 185 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 POLR3KQ9Y2Y1 108 aaPredicted RBP9.41□□□□□ -0.9
NUP54-202ENST00000502850 CREBBPQ92793 2442 aa9.41□□□□□ -0.9
NUP54-202ENST00000502850 H3BTX0 84 aa9.4□□□□□ -0.9
NUP54-202ENST00000502850 OVOL3O00110 214 aa9.4□□□□□ -0.9
NUP54-202ENST00000502850 CT45A10P0DMU9 189 aa9.4□□□□□ -0.9
NUP54-202ENST00000502850 RAB4AP20338 218 aa9.4□□□□□ -0.9
NUP54-202ENST00000502850 LMO4P61968 165 aa9.4□□□□□ -0.9
NUP54-202ENST00000502850 SLAQ13239 276 aa9.4□□□□□ -0.9
NUP54-202ENST00000502850 PSG3Q16557 428 aa9.4□□□□□ -0.9
NUP54-202ENST00000502850 KIAA1644Q3SXP7 199 aa9.4□□□□□ -0.9
NUP54-202ENST00000502850 KLF17Q5JT82 389 aaPredicted RBP9.4□□□□□ -0.9
NUP54-202ENST00000502850 TOMM20LQ6UXN7 152 aa9.4□□□□□ -0.9
NUP54-202ENST00000502850 TEX43Q6ZNM6 134 aa9.4□□□□□ -0.9
NUP54-202ENST00000502850 C18orf32Q8TCD1 76 aa9.4□□□□□ -0.9
NUP54-202ENST00000502850 FBXL7Q9UJT9 491 aa9.4□□□□□ -0.9
NUP54-202ENST00000502850 DIRC3C9JPN6 131 aa9.39□□□□□ -0.91
NUP54-202ENST00000502850 IGLV2-11P01706 119 aa9.39□□□□□ -0.91
NUP54-202ENST00000502850 SAA4P35542 130 aa9.39□□□□□ -0.91
NUP54-202ENST00000502850 FOXA3P55318 350 aaPredicted RBP9.39□□□□□ -0.91
NUP54-202ENST00000502850 C16orf54Q6UWD8 224 aa9.39□□□□□ -0.91
NUP54-202ENST00000502850 CIARTQ8N365 385 aaPredicted RBP9.39□□□□□ -0.91
NUP54-202ENST00000502850 BORCS7Q96B45 105 aa9.39□□□□□ -0.91
NUP54-202ENST00000502850 SGK494Q96LW2 274 aa9.39□□□□□ -0.91
NUP54-202ENST00000502850 BPESC1Q9GZL8 116 aa9.39□□□□□ -0.91
NUP54-202ENST00000502850 PSG8Q9UQ74 426 aa9.39□□□□□ -0.91
NUP54-202ENST00000502850 A0A1W2PS18 150 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 F2Z2F3 143 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 F8W735 103 aaPredicted RBP9.38□□□□□ -0.91
NUP54-202ENST00000502850 NPFFO15130 113 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 NDUFS7O75251 213 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 CAMPP49913 170 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 MRPL52Q86TS9 123 aaKnown RBP9.38□□□□□ -0.91
NUP54-202ENST00000502850 OR2D3Q8NGH3 330 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 ATP6V0BQ99437 205 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 PIMREGQ9BSJ6 248 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 ALKBH7Q9BT30 221 aaPredicted RBP9.38□□□□□ -0.91
NUP54-202ENST00000502850 NRN1Q9NPD7 142 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 HAX1O00165 279 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 NDUFS8O00217 210 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 CHEK1O14757 476 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 HSBP1O75506 76 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 PMCHP20382 165 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 RIGQ13278 110 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 SAPCD1Q5SSQ6 148 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 UNQ5815/PRO19632Q6UWF5 114 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 TCF24Q7RTU0 167 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 C20orf144Q9BQM9 153 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 VAMP8Q9BV40 100 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 TMUB1Q9BVT8 246 aa9.38□□□□□ -0.91
NUP54-202ENST00000502850 TRAV8-1A0A0A6YYK1 113 aa9.37□□□□□ -0.91
NUP54-202ENST00000502850 OR2T8A6NH00 312 aa9.37□□□□□ -0.91
NUP54-202ENST00000502850 EGR2P11161 476 aaPredicted RBP9.37□□□□□ -0.91
NUP54-202ENST00000502850 FBLN7Q53RD9 439 aa9.37□□□□□ -0.91
NUP54-202ENST00000502850 LINC00322Q6ZN03 302 aaPredicted RBP9.37□□□□□ -0.91
NUP54-202ENST00000502850 GTSF1Q8WW33 167 aa9.37□□□□□ -0.91
NUP54-202ENST00000502850 PGLYRP4Q96LB8 373 aa9.37□□□□□ -0.91
NUP54-202ENST00000502850 RCHY1Q96PM5 261 aa9.37□□□□□ -0.91
NUP54-202ENST00000502850 ARHGAP32A7KAX9 2087 aa9.37□□□□□ -0.91
NUP54-202ENST00000502850 NBPF19A0A087WUL8 3843 aa9.37□□□□□ -0.91
NUP54-202ENST00000502850 HRNRQ86YZ3 2850 aaPredicted RBP9.36□□□□□ -0.91
NUP54-202ENST00000502850 A0A1B0GUT8 65 aa9.36□□□□□ -0.91
NUP54-202ENST00000502850 CTSGP08311 255 aa9.36□□□□□ -0.91
NUP54-202ENST00000502850 COX6B1P14854 86 aa9.36□□□□□ -0.91
NUP54-202ENST00000502850 KRTDAPP60985 99 aa9.36□□□□□ -0.91
NUP54-202ENST00000502850 GDF5OSQ5U4N7 250 aa9.36□□□□□ -0.91
NUP54-202ENST00000502850 COX8CQ7Z4L0 72 aa9.36□□□□□ -0.91
NUP54-202ENST00000502850 ZNF502Q8TBZ5 544 aa9.36□□□□□ -0.91
NUP54-202ENST00000502850 EEF1AKMT3Q96AZ1 226 aa9.36□□□□□ -0.91
NUP54-202ENST00000502850 CHCHD1Q96BP2 118 aaKnown RBP9.36□□□□□ -0.91
NUP54-202ENST00000502850 ZC2HC1AQ96GY0 325 aa9.36□□□□□ -0.91
NUP54-202ENST00000502850 TRBV7-1A0A0A6YYK4 115 aa9.35□□□□□ -0.91
NUP54-202ENST00000502850 CENPVL3A0A0U1RRI6 287 aa9.35□□□□□ -0.91
NUP54-202ENST00000502850 ECSCRQ19T08 205 aa9.35□□□□□ -0.91
NUP54-202ENST00000502850 C15orf32Q32M92 178 aa9.35□□□□□ -0.91
NUP54-202ENST00000502850 GATD1Q8NB37 220 aa9.35□□□□□ -0.91
NUP54-202ENST00000502850 AJUBAQ96IF1 538 aa9.35□□□□□ -0.91
NUP54-202ENST00000502850 C2orf88Q9BSF0 95 aa9.35□□□□□ -0.91
NUP54-202ENST00000502850 NDFIP1Q9BT67 221 aa9.35□□□□□ -0.91
NUP54-202ENST00000502850 MOB4Q9Y3A3 225 aa9.35□□□□□ -0.91
NUP54-202ENST00000502850 S4R3C0 116 aa9.35□□□□□ -0.91
NUP54-202ENST00000502850 A0A087X0K7 114 aa9.34□□□□□ -0.91
NUP54-202ENST00000502850 SH2D7A6NKC9 451 aaPredicted RBP9.34□□□□□ -0.91
NUP54-202ENST00000502850 VWC2LB2RUY7 222 aa9.34□□□□□ -0.91
NUP54-202ENST00000502850 C19orf84I3L1E1 186 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms