RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 HLA-EP13747 358 aa-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 ATP5G3P48201 142 aa-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 DYNLT3P51808 116 aa-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 MYL6P60660 151 aa-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 AESQ08117 197 aa-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 TMEM97Q5BJF2 176 aa-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 TMEM14EPQ6UXP3 125 aa-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 LRRC18Q8N456 261 aa-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 CHCHD1Q96BP2 118 aaKnown RBP-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 HYLS1Q96M11 299 aa-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 ZNF714Q96N38 554 aa-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 LIMD2Q9BT23 127 aa-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 KIFC1Q9BW19 673 aa-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 IMUPQ9GZP8 106 aa-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 NUP98P52948 1817 aa-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 hDV103S1A0JD37 113 aa-0.26□□□□□ -2.45
SMAD1-203ENST00000502342 C9orf170A2RU37 121 aa-0.26□□□□□ -2.45
SMAD1-203ENST00000502342 LY6G6CO95867 125 aa-0.26□□□□□ -2.45
SMAD1-203ENST00000502342 C10orf99Q6UWK7 81 aa-0.26□□□□□ -2.45
SMAD1-203ENST00000502342 CASC2Q6XLA1 102 aa-0.26□□□□□ -2.45
SMAD1-203ENST00000502342 LINC00299Q6ZSB3 139 aa-0.26□□□□□ -2.45
SMAD1-203ENST00000502342 LYG2Q86SG7 212 aa-0.26□□□□□ -2.45
SMAD1-203ENST00000502342 RMND5BQ96G75 393 aaPredicted RBP-0.26□□□□□ -2.45
SMAD1-203ENST00000502342 PTPRDP23468 1912 aa-0.26□□□□□ -2.45
SMAD1-203ENST00000502342 OTOGQ6ZRI0 2925 aa-0.27□□□□□ -2.45
SMAD1-203ENST00000502342 UNC79Q9P2D8 2635 aa-0.27□□□□□ -2.45
SMAD1-203ENST00000502342 CCDC144AA2RUR9 1427 aa-0.27□□□□□ -2.45
SMAD1-203ENST00000502342 CACNA1HO95180 2353 aa-0.27□□□□□ -2.45
SMAD1-203ENST00000502342 ODAMA1E959 279 aa-0.27□□□□□ -2.45
SMAD1-203ENST00000502342 PRORSD1PA6NEY8 169 aa-0.27□□□□□ -2.45
SMAD1-203ENST00000502342 CAV3P56539 151 aa-0.27□□□□□ -2.45
SMAD1-203ENST00000502342 IFT20Q8IY31 132 aa-0.27□□□□□ -2.45
SMAD1-203ENST00000502342 OTUD6BQ8N6M0 293 aa-0.27□□□□□ -2.45
SMAD1-203ENST00000502342 BTF3L4Q96K17 158 aa-0.27□□□□□ -2.45
SMAD1-203ENST00000502342 TEX37Q96LM6 180 aa-0.27□□□□□ -2.45
SMAD1-203ENST00000502342 PARD6GQ9BYG4 376 aaPredicted RBP-0.27□□□□□ -2.45
SMAD1-203ENST00000502342 POPDC3Q9HBV1 291 aa-0.27□□□□□ -2.45
SMAD1-203ENST00000502342 CEP164Q9UPV0 1460 aa-0.28□□□□□ -2.45
SMAD1-203ENST00000502342 POLQO75417 2590 aa-0.28□□□□□ -2.45
SMAD1-203ENST00000502342 HMGB3O15347 200 aaKnown RBP-0.28□□□□□ -2.45
SMAD1-203ENST00000502342 BANF1O75531 89 aa-0.28□□□□□ -2.45
SMAD1-203ENST00000502342 KLRD1Q13241 179 aa-0.28□□□□□ -2.45
SMAD1-203ENST00000502342 PATE2Q6UY27 113 aa-0.28□□□□□ -2.45
SMAD1-203ENST00000502342 ARL5BQ96KC2 179 aa-0.28□□□□□ -2.45
SMAD1-203ENST00000502342 SIGMAR1Q99720 223 aa-0.28□□□□□ -2.45
SMAD1-203ENST00000502342 LPAR5Q9H1C0 372 aa-0.28□□□□□ -2.45
SMAD1-203ENST00000502342 PARVBQ9HBI1 364 aa-0.28□□□□□ -2.45
SMAD1-203ENST00000502342 FLNCQ14315 2725 aa-0.28□□□□□ -2.45
SMAD1-203ENST00000502342 KDM6BO15054 1643 aa-0.28□□□□□ -2.45
SMAD1-203ENST00000502342 MIA2Q96PC5 1412 aa-0.29□□□□□ -2.46
SMAD1-203ENST00000502342 CACNA1CQ13936 2221 aa-0.29□□□□□ -2.46
SMAD1-203ENST00000502342 HAND1O96004 215 aa-0.29□□□□□ -2.46
SMAD1-203ENST00000502342 TCRBP04435 133 aa-0.29□□□□□ -2.46
SMAD1-203ENST00000502342 SPA17Q15506 151 aa-0.29□□□□□ -2.46
SMAD1-203ENST00000502342 SPINK13Q1W4C9 94 aa-0.29□□□□□ -2.46
SMAD1-203ENST00000502342 Q5BKY6 102 aa-0.29□□□□□ -2.46
SMAD1-203ENST00000502342 PTRHD1Q6GMV3 140 aaKnown RBP-0.29□□□□□ -2.46
SMAD1-203ENST00000502342 C10orf111Q8N326 155 aa-0.29□□□□□ -2.46
SMAD1-203ENST00000502342 ZHX1-C8orf76Q96EF9 292 aa-0.29□□□□□ -2.46
SMAD1-203ENST00000502342 MAP1LC3BQ9GZQ8 125 aa-0.29□□□□□ -2.46
SMAD1-203ENST00000502342 NMNAT1Q9HAN9 279 aaPredicted RBP-0.29□□□□□ -2.46
SMAD1-203ENST00000502342 FAM32AQ9Y421 112 aaKnown RBP-0.29□□□□□ -2.46
SMAD1-203ENST00000502342 NUP210LQ5VU65 1888 aa-0.29□□□□□ -2.46
SMAD1-203ENST00000502342 NSD1Q96L73 2696 aaPredicted RBP-0.3□□□□□ -2.46
SMAD1-203ENST00000502342 DUXBA0A1W2PPF3 345 aa-0.3□□□□□ -2.46
SMAD1-203ENST00000502342 IFNA4P05014 189 aa-0.3□□□□□ -2.46
SMAD1-203ENST00000502342 NFYBP25208 207 aa-0.3□□□□□ -2.46
SMAD1-203ENST00000502342 LSM6P62312 80 aaKnown RBP-0.3□□□□□ -2.46
SMAD1-203ENST00000502342 TAF1AQ15573 450 aaPredicted RBP-0.3□□□□□ -2.46
SMAD1-203ENST00000502342 LIN52Q52LA3 116 aa-0.3□□□□□ -2.46
SMAD1-203ENST00000502342 PPP1R14BQ96C90 147 aa-0.3□□□□□ -2.46
SMAD1-203ENST00000502342 CACYBPQ9HB71 228 aaKnown RBP-0.3□□□□□ -2.46
SMAD1-203ENST00000502342 ENY2Q9NPA8 101 aa-0.3□□□□□ -2.46
SMAD1-203ENST00000502342 ASXL3Q9C0F0 2248 aa-0.3□□□□□ -2.46
SMAD1-203ENST00000502342 CELSR1Q9NYQ6 3014 aa-0.31□□□□□ -2.46
SMAD1-203ENST00000502342 DOCK4Q8N1I0 1966 aa-0.31□□□□□ -2.46
SMAD1-203ENST00000502342 LYRM1O43325 122 aa-0.31□□□□□ -2.46
SMAD1-203ENST00000502342 SULT1C4O75897 302 aa-0.31□□□□□ -2.46
SMAD1-203ENST00000502342 IGHV3-33P01772 117 aa-0.31□□□□□ -2.46
SMAD1-203ENST00000502342 CRHP06850 196 aa-0.31□□□□□ -2.46
SMAD1-203ENST00000502342 PDE6GP18545 87 aa-0.31□□□□□ -2.46
SMAD1-203ENST00000502342 FOXI2Q6ZQN5 318 aa-0.31□□□□□ -2.46
SMAD1-203ENST00000502342 GOLT1AQ6ZVE7 132 aa-0.31□□□□□ -2.46
SMAD1-203ENST00000502342 ANGPTL5Q86XS5 388 aa-0.31□□□□□ -2.46
SMAD1-203ENST00000502342 C5orf17Q8NAS9 161 aa-0.31□□□□□ -2.46
SMAD1-203ENST00000502342 MALSU1Q96EH3 234 aa-0.31□□□□□ -2.46
SMAD1-203ENST00000502342 ADCY9O60503 1353 aa-0.32□□□□□ -2.46
SMAD1-203ENST00000502342 RBBP6Q7Z6E9 1792 aaKnown RBP-0.32□□□□□ -2.46
SMAD1-203ENST00000502342 NCAPD3P42695 1498 aa-0.32□□□□□ -2.46
SMAD1-203ENST00000502342 K7ERJ3 54 aa-0.32□□□□□ -2.46
SMAD1-203ENST00000502342 RER1O15258 196 aa-0.32□□□□□ -2.46
SMAD1-203ENST00000502342 CXCL1P09341 107 aa-0.32□□□□□ -2.46
SMAD1-203ENST00000502342 TMBIM6P55061 237 aa-0.32□□□□□ -2.46
SMAD1-203ENST00000502342 ARPP19P56211 112 aa-0.32□□□□□ -2.46
SMAD1-203ENST00000502342 RPL37P61927 97 aaKnown RBP-0.32□□□□□ -2.46
SMAD1-203ENST00000502342 MIR22HGQ0VDD5 57 aa-0.32□□□□□ -2.46
SMAD1-203ENST00000502342 ITGB3BPQ13352 177 aaPredicted RBP-0.32□□□□□ -2.46
SMAD1-203ENST00000502342 VMA21Q3ZAQ7 101 aa-0.32□□□□□ -2.46
SMAD1-203ENST00000502342 OR10X1Q8NGY0 326 aa-0.32□□□□□ -2.46
SMAD1-203ENST00000502342 PPTC7Q8NI37 304 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms