RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 PSG3Q16557 428 aa7.73□□□□□ -1.17
CLIP1-204ENST00000501271 SPATA12Q7Z6I5 190 aa7.73□□□□□ -1.17
CLIP1-204ENST00000501271 LYPD1Q8N2G4 141 aa7.73□□□□□ -1.17
CLIP1-204ENST00000501271 CLEC5AQ9NY25 188 aa7.73□□□□□ -1.17
CLIP1-204ENST00000501271 PSG8Q9UQ74 426 aa7.73□□□□□ -1.17
CLIP1-204ENST00000501271 RNF24Q9Y225 148 aa7.73□□□□□ -1.17
CLIP1-204ENST00000501271 ZFHX3Q15911 3703 aa7.73□□□□□ -1.17
CLIP1-204ENST00000501271 SPTBN4Q9H254 2564 aa7.72□□□□□ -1.17
CLIP1-204ENST00000501271 LOC102724200A0A096LPH7 203 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-204ENST00000501271 M0QZK8 103 aa7.72□□□□□ -1.17
CLIP1-204ENST00000501271 NDUFS7O75251 213 aa7.72□□□□□ -1.17
CLIP1-204ENST00000501271 IGLC3P0DOY3 106 aa7.72□□□□□ -1.17
CLIP1-204ENST00000501271 MFAP4P55083 255 aa7.72□□□□□ -1.17
CLIP1-204ENST00000501271 Q56UQ5 140 aa7.72□□□□□ -1.17
CLIP1-204ENST00000501271 DTX2Q86UW9 622 aa7.72□□□□□ -1.17
CLIP1-204ENST00000501271 TTC9CQ8N5M4 171 aa7.72□□□□□ -1.17
CLIP1-204ENST00000501271 ZNF48Q96MX3 618 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-204ENST00000501271 TRAV30A0A087WSZ9 112 aa7.72□□□□□ -1.17
CLIP1-204ENST00000501271 CHEK1O14757 476 aa7.72□□□□□ -1.17
CLIP1-204ENST00000501271 NDUFB8O95169 186 aa7.72□□□□□ -1.17
CLIP1-204ENST00000501271 BTF3P20290 206 aaKnown RBP7.72□□□□□ -1.17
CLIP1-204ENST00000501271 CRIP1P50238 77 aa7.72□□□□□ -1.17
CLIP1-204ENST00000501271 CCDC144NLQ6NUI1 221 aa7.72□□□□□ -1.17
CLIP1-204ENST00000501271 C21orf62Q9NYP8 219 aa7.72□□□□□ -1.17
CLIP1-204ENST00000501271 ZFP30Q9Y2G7 519 aa7.72□□□□□ -1.17
CLIP1-204ENST00000501271 IGHV1-24A0A0C4DH33 117 aa7.71□□□□□ -1.17
CLIP1-204ENST00000501271 K7EQM0 130 aa7.71□□□□□ -1.17
CLIP1-204ENST00000501271 RPLP1P05386 114 aaKnown RBP7.71□□□□□ -1.17
CLIP1-204ENST00000501271 ARMS2P0C7Q2 107 aa7.71□□□□□ -1.17
CLIP1-204ENST00000501271 BATFQ16520 125 aa7.71□□□□□ -1.17
CLIP1-204ENST00000501271 C1orf122Q6ZSJ8 110 aa7.71□□□□□ -1.17
CLIP1-204ENST00000501271 C8orf49Q96NF6 230 aa7.71□□□□□ -1.17
CLIP1-204ENST00000501271 OR2T8A6NH00 312 aa7.71□□□□□ -1.18
CLIP1-204ENST00000501271 EGR2P11161 476 aaPredicted RBP7.71□□□□□ -1.18
CLIP1-204ENST00000501271 TMEM11P17152 192 aa7.71□□□□□ -1.18
CLIP1-204ENST00000501271 G0S2P27469 103 aa7.71□□□□□ -1.18
CLIP1-204ENST00000501271 EBI3Q14213 229 aa7.71□□□□□ -1.18
CLIP1-204ENST00000501271 TMEM190Q8WZ59 177 aa7.71□□□□□ -1.18
CLIP1-204ENST00000501271 COL25A1Q9BXS0 654 aaPredicted RBP7.71□□□□□ -1.18
CLIP1-204ENST00000501271 SIRPDQ9H106 197 aa7.71□□□□□ -1.18
CLIP1-204ENST00000501271 UQCR10Q9UDW1 63 aa7.71□□□□□ -1.18
CLIP1-204ENST00000501271 IGHV7-81A0A0B4J1V7 117 aa7.7□□□□□ -1.18
CLIP1-204ENST00000501271 A0A1B0GUT8 65 aa7.7□□□□□ -1.18
CLIP1-204ENST00000501271 ZNF138P52744 262 aa7.7□□□□□ -1.18
CLIP1-204ENST00000501271 PDE6HQ13956 83 aa7.7□□□□□ -1.18
CLIP1-204ENST00000501271 C21orf62-AS1Q17RA5 79 aa7.7□□□□□ -1.18
CLIP1-204ENST00000501271 LINC00173Q6ZV60 143 aa7.7□□□□□ -1.18
CLIP1-204ENST00000501271 CHCHD1Q96BP2 118 aaKnown RBP7.7□□□□□ -1.18
CLIP1-204ENST00000501271 NDFIP1Q9BT67 221 aa7.7□□□□□ -1.18
CLIP1-204ENST00000501271 C1RLQ9NZP8 487 aa7.7□□□□□ -1.18
CLIP1-204ENST00000501271 OOSP1A8MZH6 123 aa7.7□□□□□ -1.18
CLIP1-204ENST00000501271 MINOS1Q5TGZ0 78 aa7.7□□□□□ -1.18
CLIP1-204ENST00000501271 AAMDCQ9H7C9 122 aa7.7□□□□□ -1.18
CLIP1-204ENST00000501271 MINOS1-NBL1R4GNA1 71 aa7.7□□□□□ -1.18
CLIP1-204ENST00000501271 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.69□□□□□ -1.18
CLIP1-204ENST00000501271 CTSGP08311 255 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 LINC00614P0C842 121 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 FAM162BQ5T6X4 162 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 Q6ZN92 141 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 Q8N9W7 124 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 TXN2Q99757 166 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 TMEM70Q9BUB7 260 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 LPAR2Q9HBW0 351 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 THYN1Q9P016 225 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 CHD8Q9HCK8 2581 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 NCOR2Q9Y618 2525 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 VPS13CQ709C8 3753 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 IGHV3OR16-8A0A075B7F1 116 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 TRAV9-2A0A087WT02 112 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 IGKV2-40A0A087WW87 121 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-204ENST00000501271 IGKV2D-40P01614 121 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-204ENST00000501271 ZNF25P17030 456 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-204ENST00000501271 AKAP6Q13023 2319 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 ITPR1Q14643 2758 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 AJUBAQ96IF1 538 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 TPPP3Q9BW30 176 aa7.69□□□□□ -1.18
CLIP1-204ENST00000501271 CACNA1BQ00975 2339 aa7.68□□□□□ -1.18
CLIP1-204ENST00000501271 IGHV3-35A0A0C4DH35 117 aa7.68□□□□□ -1.18
CLIP1-204ENST00000501271 IGLL1P15814 213 aa7.68□□□□□ -1.18
CLIP1-204ENST00000501271 HNRNPA3P51991 378 aaKnown RBP7.68□□□□□ -1.18
CLIP1-204ENST00000501271 RIGQ13278 110 aa7.68□□□□□ -1.18
CLIP1-204ENST00000501271 S100A7AQ86SG5 101 aa7.68□□□□□ -1.18
CLIP1-204ENST00000501271 KLHDC1Q8N7A1 406 aa7.68□□□□□ -1.18
CLIP1-204ENST00000501271 GATD1Q8NB37 220 aa7.68□□□□□ -1.18
CLIP1-204ENST00000501271 UBTD1Q9HAC8 227 aa7.68□□□□□ -1.18
CLIP1-204ENST00000501271 IGHV2-70DA0A0C4DH43 119 aa7.68□□□□□ -1.18
CLIP1-204ENST00000501271 CRXO43186 299 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-204ENST00000501271 LEPROTL1O95214 131 aa7.68□□□□□ -1.18
CLIP1-204ENST00000501271 CSN3P07498 182 aa7.68□□□□□ -1.18
CLIP1-204ENST00000501271 CT45A10P0DMU9 189 aa7.68□□□□□ -1.18
CLIP1-204ENST00000501271 TFPI2P48307 235 aa7.68□□□□□ -1.18
CLIP1-204ENST00000501271 IGFL4Q6B9Z1 124 aa7.68□□□□□ -1.18
CLIP1-204ENST00000501271 SMAD5-AS1Q9Y6J3 95 aa7.68□□□□□ -1.18
CLIP1-204ENST00000501271 TMSB15BA0A087X1C1 80 aa7.67□□□□□ -1.18
CLIP1-204ENST00000501271 SYS1-DBNDD2H3BUS1 97 aa7.67□□□□□ -1.18
CLIP1-204ENST00000501271 SH2D1AO60880 128 aa7.67□□□□□ -1.18
CLIP1-204ENST00000501271 RPL7P18124 248 aaKnown RBP7.67□□□□□ -1.18
CLIP1-204ENST00000501271 HLA-DMBP28068 263 aa7.67□□□□□ -1.18
CLIP1-204ENST00000501271 CSN1S1P47710 185 aa7.67□□□□□ -1.18
CLIP1-204ENST00000501271 PSG9Q00887 426 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms