RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 SPANXN5Q5MJ07 72 aa10.09□□□□□ -0.79
SEC61A1-207ENST00000498837 Q6ZRN7 208 aaPredicted RBP10.09□□□□□ -0.79
SEC61A1-207ENST00000498837 LYPD1Q8N2G4 141 aa10.09□□□□□ -0.79
SEC61A1-207ENST00000498837 DIRAS2Q96HU8 199 aa10.09□□□□□ -0.79
SEC61A1-207ENST00000498837 PARD6GQ9BYG4 376 aaPredicted RBP10.09□□□□□ -0.79
SEC61A1-207ENST00000498837 HIGD1AQ9Y241 93 aa10.09□□□□□ -0.79
SEC61A1-207ENST00000498837 SRRM2Q9UQ35 2752 aaKnown RBP10.09□□□□□ -0.79
SEC61A1-207ENST00000498837 A0A087X0K7 114 aa10.08□□□□□ -0.8
SEC61A1-207ENST00000498837 DUXBA0A1W2PPF3 345 aa10.08□□□□□ -0.8
SEC61A1-207ENST00000498837 H3BP45 60 aa10.08□□□□□ -0.8
SEC61A1-207ENST00000498837 H7BYZ3 331 aa10.08□□□□□ -0.8
SEC61A1-207ENST00000498837 IL5P05113 134 aa10.08□□□□□ -0.8
SEC61A1-207ENST00000498837 SLC25A6P12236 298 aa10.08□□□□□ -0.8
SEC61A1-207ENST00000498837 RAP2BP61225 183 aa10.08□□□□□ -0.8
SEC61A1-207ENST00000498837 RPP30P78346 268 aaKnown RBP10.08□□□□□ -0.8
SEC61A1-207ENST00000498837 CYP2G1PQ6ZSU1 146 aa10.08□□□□□ -0.8
SEC61A1-207ENST00000498837 ACOT7LQ6ZUV0 252 aa10.08□□□□□ -0.8
SEC61A1-207ENST00000498837 LRRC20Q8TCA0 184 aa10.08□□□□□ -0.8
SEC61A1-207ENST00000498837 RPUSD4Q96CM3 377 aaKnown RBP10.08□□□□□ -0.8
SEC61A1-207ENST00000498837 CIB3Q96Q77 187 aaPredicted RBP10.08□□□□□ -0.8
SEC61A1-207ENST00000498837 MYCBP2O75592 4640 aa10.08□□□□□ -0.8
SEC61A1-207ENST00000498837 HYPMO75409 117 aa10.07□□□□□ -0.8
SEC61A1-207ENST00000498837 ADAP1O75689 374 aa10.07□□□□□ -0.8
SEC61A1-207ENST00000498837 OR5G3P0C626 314 aa10.07□□□□□ -0.8
SEC61A1-207ENST00000498837 TMED4Q7Z7H5 227 aa10.07□□□□□ -0.8
SEC61A1-207ENST00000498837 SMCO3A2RU48 225 aa10.06□□□□□ -0.8
SEC61A1-207ENST00000498837 H3BNG1 76 aa10.06□□□□□ -0.8
SEC61A1-207ENST00000498837 MRPS12O15235 138 aaKnown RBP10.06□□□□□ -0.8
SEC61A1-207ENST00000498837 SNRPCP09234 159 aaKnown RBP10.06□□□□□ -0.8
SEC61A1-207ENST00000498837 LINC00869P0C866 280 aa10.06□□□□□ -0.8
SEC61A1-207ENST00000498837 PLP1P60201 277 aa10.06□□□□□ -0.8
SEC61A1-207ENST00000498837 TMEM128Q5BJH2 165 aa10.06□□□□□ -0.8
SEC61A1-207ENST00000498837 PATE2Q6UY27 113 aa10.06□□□□□ -0.8
SEC61A1-207ENST00000498837 CCDC28AQ8IWP9 274 aa10.06□□□□□ -0.8
SEC61A1-207ENST00000498837 LRTM2Q8N967 370 aa10.06□□□□□ -0.8
SEC61A1-207ENST00000498837 C20orf144Q9BQM9 153 aa10.06□□□□□ -0.8
SEC61A1-207ENST00000498837 PGPEP1Q9NXJ5 209 aa10.06□□□□□ -0.8
SEC61A1-207ENST00000498837 STRAPQ9Y3F4 350 aaKnown RBP10.06□□□□□ -0.8
SEC61A1-207ENST00000498837 A0A096LPF7 62 aa10.05□□□□□ -0.8
SEC61A1-207ENST00000498837 PMS2P5A8MQ11 134 aa10.05□□□□□ -0.8
SEC61A1-207ENST00000498837 RLN2P04090 185 aa10.05□□□□□ -0.8
SEC61A1-207ENST00000498837 VAMP1P23763 118 aa10.05□□□□□ -0.8
SEC61A1-207ENST00000498837 Q5VSD8 79 aa10.05□□□□□ -0.8
SEC61A1-207ENST00000498837 GFI1BQ5VTD9 330 aa10.05□□□□□ -0.8
SEC61A1-207ENST00000498837 DYNC2LI1Q8TCX1 351 aa10.05□□□□□ -0.8
SEC61A1-207ENST00000498837 VSIG2Q96IQ7 327 aa10.05□□□□□ -0.8
SEC61A1-207ENST00000498837 TMPRSS5Q9H3S3 457 aa10.05□□□□□ -0.8
SEC61A1-207ENST00000498837 RABL2AQ9UBK7 228 aaPredicted RBP10.05□□□□□ -0.8
SEC61A1-207ENST00000498837 RABL2BQ9UNT1 228 aa10.05□□□□□ -0.8
SEC61A1-207ENST00000498837 TNFRSF18Q9Y5U5 241 aa10.05□□□□□ -0.8
SEC61A1-207ENST00000498837 PIGBOS1A0A0B4J2F0 54 aa10.04□□□□□ -0.8
SEC61A1-207ENST00000498837 SNURFLB1AK76 121 aa10.04□□□□□ -0.8
SEC61A1-207ENST00000498837 PRAC2D3DTV9 90 aa10.04□□□□□ -0.8
SEC61A1-207ENST00000498837 J3KRW8 73 aa10.04□□□□□ -0.8
SEC61A1-207ENST00000498837 HOXB5P09067 269 aa10.04□□□□□ -0.8
SEC61A1-207ENST00000498837 ANXA7P20073 488 aaKnown RBP10.04□□□□□ -0.8
SEC61A1-207ENST00000498837 TMBIM6P55061 237 aa10.04□□□□□ -0.8
SEC61A1-207ENST00000498837 Q6ZTI0 123 aa10.04□□□□□ -0.8
SEC61A1-207ENST00000498837 CCDC190Q86UF4 302 aa10.04□□□□□ -0.8
SEC61A1-207ENST00000498837 RAB2BQ8WUD1 216 aa10.04□□□□□ -0.8
SEC61A1-207ENST00000498837 ARL6Q9H0F7 186 aa10.04□□□□□ -0.8
SEC61A1-207ENST00000498837 ZNF331Q9NQX6 463 aaPredicted RBP10.04□□□□□ -0.8
SEC61A1-207ENST00000498837 SIVA1O15304 175 aa10.03□□□□□ -0.8
SEC61A1-207ENST00000498837 CCNKO75909 580 aa10.03□□□□□ -0.8
SEC61A1-207ENST00000498837 RSL24D1Q9UHA3 163 aaKnown RBP10.03□□□□□ -0.8
SEC61A1-207ENST00000498837 H3BTX0 84 aa10.02□□□□□ -0.81
SEC61A1-207ENST00000498837 SFT2D2O95562 160 aa10.02□□□□□ -0.81
SEC61A1-207ENST00000498837 KRTAP10-1P60331 282 aa10.02□□□□□ -0.81
SEC61A1-207ENST00000498837 RRAS2P62070 204 aaPredicted RBP10.02□□□□□ -0.81
SEC61A1-207ENST00000498837 SELENOTP62341 195 aa10.02□□□□□ -0.81
SEC61A1-207ENST00000498837 PPP1R1AQ13522 171 aa10.02□□□□□ -0.81
SEC61A1-207ENST00000498837 ZBTB8BQ8NAP8 495 aaPredicted RBP10.02□□□□□ -0.81
SEC61A1-207ENST00000498837 FRZBQ92765 325 aa10.02□□□□□ -0.81
SEC61A1-207ENST00000498837 SOSTQ9BQB4 213 aa10.02□□□□□ -0.81
SEC61A1-207ENST00000498837 BCL7BQ9BQE9 202 aa10.02□□□□□ -0.81
SEC61A1-207ENST00000498837 ARV1Q9H2C2 271 aa10.02□□□□□ -0.81
SEC61A1-207ENST00000498837 PTTG2Q9NZH5 202 aa10.02□□□□□ -0.81
SEC61A1-207ENST00000498837 CCDC59Q9P031 241 aaKnown RBP10.02□□□□□ -0.81
SEC61A1-207ENST00000498837 TRAV12-3A0A0B4J271 114 aa10.01□□□□□ -0.81
SEC61A1-207ENST00000498837 LINC00854A0A1B0GVQ3 168 aa10.01□□□□□ -0.81
SEC61A1-207ENST00000498837 SLC17A3O00476 420 aa10.01□□□□□ -0.81
SEC61A1-207ENST00000498837 EREGO14944 169 aa10.01□□□□□ -0.81
SEC61A1-207ENST00000498837 SMR3BP02814 79 aaPredicted RBP10.01□□□□□ -0.81
SEC61A1-207ENST00000498837 DNAH10OSP0CZ25 163 aa10.01□□□□□ -0.81
SEC61A1-207ENST00000498837 ERVFC1-1P60608 527 aa10.01□□□□□ -0.81
SEC61A1-207ENST00000498837 POLR2GP62487 172 aaKnown RBP eCLIP10.01□□□□□ -0.81
SEC61A1-207ENST00000498837 ID3Q02535 119 aa10.01□□□□□ -0.81
SEC61A1-207ENST00000498837 LCN15Q6UWW0 184 aa10.01□□□□□ -0.81
SEC61A1-207ENST00000498837 SLC50A1Q9BRV3 221 aa10.01□□□□□ -0.81
SEC61A1-207ENST00000498837 SLIRPQ9GZT3 109 aaKnown RBP10.01□□□□□ -0.81
SEC61A1-207ENST00000498837 PSENENQ9NZ42 101 aa10.01□□□□□ -0.81
SEC61A1-207ENST00000498837 H3BMQ9 156 aa10□□□□□ -0.81
SEC61A1-207ENST00000498837 CT45A10P0DMU9 189 aa10□□□□□ -0.81
SEC61A1-207ENST00000498837 CXCL2P19875 107 aa10□□□□□ -0.81
SEC61A1-207ENST00000498837 DAZ2Q13117 558 aaKnown RBP10□□□□□ -0.81
SEC61A1-207ENST00000498837 CDPF1Q6NVV7 123 aa10□□□□□ -0.81
SEC61A1-207ENST00000498837 LINC00305Q7Z4B0 112 aa10□□□□□ -0.81
SEC61A1-207ENST00000498837 S100A7AQ86SG5 101 aa10□□□□□ -0.81
SEC61A1-207ENST00000498837 NPVFQ9HCQ7 196 aa10□□□□□ -0.81
SEC61A1-207ENST00000498837 MDFICQ9P1T7 246 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms