RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 GFRALQ6UXV0 394 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 MRPL53Q96EL3 112 aaKnown RBP4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 NAV3Q8IVL0 2385 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 A0A1W2PRD5 423 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 A0A1W2PRF3 423 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 A0A1W2PRM7 423 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 PRSS46E5RG02 174 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 CRLF1O75462 422 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 CCL1P22362 96 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 NMUP48645 174 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 SEC11AP67812 179 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 HBG1P69891 147 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 HBG2P69892 147 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 H1FXQ92522 213 aaKnown RBP4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 ZFHX3Q15911 3703 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 COL5A1P20908 1838 aaPredicted RBP4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 CELSR2Q9HCU4 2923 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 TRGV10A0A0A0MS01 117 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 TRGV8A0A0C4DH27 118 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 SMIM27A0A1W2PRY6 76 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 NPIPB11E5RHQ5 1161 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 H0Y980 276 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 SPRY3O43610 288 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 CEACAM4O75871 244 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 GCSHP23434 173 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 BRWD1-AS2P59051 145 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 SRSF1Q07955 248 aaKnown RBP eCLIP4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 TRAPPC2LQ9UL33 140 aa4.65□□□□□ -1.66
SOX2-OT-218ENST00000498731 ITPR2Q14571 2701 aa4.65□□□□□ -1.67
SOX2-OT-218ENST00000498731 PTPRBP23467 1997 aa4.65□□□□□ -1.67
SOX2-OT-218ENST00000498731 IGKV3D-15A0A087WSY6 115 aa4.65□□□□□ -1.67
SOX2-OT-218ENST00000498731 SPRY2O43597 315 aa4.65□□□□□ -1.67
SOX2-OT-218ENST00000498731 ZNF134P52741 427 aa4.65□□□□□ -1.67
SOX2-OT-218ENST00000498731 FAM27E3Q08E93 113 aa4.65□□□□□ -1.67
SOX2-OT-218ENST00000498731 ZNF816Q0VGE8 651 aaPredicted RBP4.65□□□□□ -1.67
SOX2-OT-218ENST00000498731 Q6AWC8 147 aa4.65□□□□□ -1.67
SOX2-OT-218ENST00000498731 LINC00322Q6ZN03 302 aaPredicted RBP4.65□□□□□ -1.67
SOX2-OT-218ENST00000498731 GCSAMQ8N6F7 178 aa4.65□□□□□ -1.67
SOX2-OT-218ENST00000498731 OR5A1Q8NGJ0 315 aa4.65□□□□□ -1.67
SOX2-OT-218ENST00000498731 GTSF1Q8WW33 167 aa4.65□□□□□ -1.67
SOX2-OT-218ENST00000498731 CARD19Q96LW7 228 aa4.65□□□□□ -1.67
SOX2-OT-218ENST00000498731 FGF23Q9GZV9 251 aaPredicted RBP4.65□□□□□ -1.67
SOX2-OT-218ENST00000498731 ASH1LQ9NR48 2969 aaKnown RBP4.65□□□□□ -1.67
SOX2-OT-218ENST00000498731 H3BS24 57 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 IGLV3-1P01715 115 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 GNG3P63215 75 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 PRR30Q53SZ7 412 aaPredicted RBP4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 IBA57Q5T440 356 aaKnown RBP4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 ZNF562Q6V9R5 426 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 ABHD12Q8N2K0 398 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 RFESDQ8TAC1 157 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 C10orf35Q96D05 121 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 ZNF331Q9NQX6 463 aaPredicted RBP4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 NHP2Q9NX24 153 aaKnown RBP4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 TMSB15BA0A087X1C1 80 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 GGTLC3B5MD39 225 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 WNT9BO14905 357 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 HLA-DQA1P01909 254 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 MPV17P39210 176 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 RPL30P62888 115 aaKnown RBP4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 Q6ZQT7 251 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 FOXL2NBQ6ZUU3 175 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 MIR17HGQ75NE6 70 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 MOB3BQ86TA1 216 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 IL17DQ8TAD2 202 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 ZNF503Q96F45 646 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 PRELID3AQ96N28 172 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 MGST2Q99735 147 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 ABCA1O95477 2261 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 A0A096LNJ9 63 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 TRBV9A0A0B4J1U6 114 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 GNG4P50150 75 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 KLF5Q13887 457 aaPredicted RBP4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 MORN5Q5VZ52 161 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 ABHD14BQ96IU4 210 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 RTL8AQ9BWD3 113 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 FAM234AQ9H0X4 552 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 KCNIP1Q9NZI2 227 aa4.64□□□□□ -1.67
SOX2-OT-218ENST00000498731 TMEM8BA6NDV4 472 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 GCHFRP30047 84 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 RBM11P57052 281 aaKnown RBP4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 SSBP2P81877 361 aaPredicted RBP4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 RTL8BQ17RB0 113 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 LINC01545Q5VT33 79 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 BCL6BQ8N143 479 aaPredicted RBP4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 TIMM9Q9Y5J7 89 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 SETD2Q9BYW2 2564 aaPredicted RBP4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 IGHV3OR15-7A0A075B7D8 119 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 HIGD1CA8MV81 97 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 MGST3O14880 152 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 MT-ND6P03923 174 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 CECR9P0C854 216 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 FOXI1Q12951 378 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 SRSF9Q13242 221 aaKnown RBP eCLIP4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 PSG5Q15238 335 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 FAM201AQ5SY85 155 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 Q6ZT83 130 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 SEM1Q6ZVN7 128 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 ZCCHC24Q8N2G6 241 aaKnown RBP4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 KLF14Q8TD94 323 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms