RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 INSIG2Q9Y5U4 225 aa13□□□□□ -0.33
COL6A1-206ENST00000498614 LRBAP50851 2863 aa12.99□□□□□ -0.33
COL6A1-206ENST00000498614 A0A087X0K7 114 aa12.99□□□□□ -0.33
COL6A1-206ENST00000498614 IGHV1-3A0A0C4DH29 117 aa12.99□□□□□ -0.33
COL6A1-206ENST00000498614 OR5AL1P0C617 328 aa12.99□□□□□ -0.33
COL6A1-206ENST00000498614 PSG1P11464 419 aa12.99□□□□□ -0.33
COL6A1-206ENST00000498614 COL8A1P27658 744 aa12.99□□□□□ -0.33
COL6A1-206ENST00000498614 FOXE3Q13461 319 aa12.99□□□□□ -0.33
COL6A1-206ENST00000498614 ETFRF1Q6IPR1 90 aa12.99□□□□□ -0.33
COL6A1-206ENST00000498614 SPTAN1Q13813 2472 aaKnown RBP12.99□□□□□ -0.33
COL6A1-206ENST00000498614 HAX1O00165 279 aa12.99□□□□□ -0.33
COL6A1-206ENST00000498614 SIGLEC9Q9Y336 463 aa12.99□□□□□ -0.33
COL6A1-206ENST00000498614 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.98□□□□□ -0.33
COL6A1-206ENST00000498614 BUB1B-PAK6H3BSN5 160 aa12.98□□□□□ -0.33
COL6A1-206ENST00000498614 CRYGBP07316 175 aa12.98□□□□□ -0.33
COL6A1-206ENST00000498614 AMMECR1LQ6DCA0 310 aa12.98□□□□□ -0.33
COL6A1-206ENST00000498614 C12orf54Q6X4T0 127 aa12.98□□□□□ -0.33
COL6A1-206ENST00000498614 PRNTQ86SH4 94 aa12.98□□□□□ -0.33
COL6A1-206ENST00000498614 IGLV2-11P01706 119 aa12.98□□□□□ -0.33
COL6A1-206ENST00000498614 PVRIGQ6DKI7 326 aa12.98□□□□□ -0.33
COL6A1-206ENST00000498614 EXOC3-AS1Q8N2X6 119 aa12.98□□□□□ -0.33
COL6A1-206ENST00000498614 C8orf46Q8TAG6 207 aa12.98□□□□□ -0.33
COL6A1-206ENST00000498614 TNFRSF14Q92956 283 aa12.98□□□□□ -0.33
COL6A1-206ENST00000498614 HSPB8Q9UJY1 196 aa12.98□□□□□ -0.33
COL6A1-206ENST00000498614 PPIAL4CA0A0B4J2A2 164 aa12.97□□□□□ -0.33
COL6A1-206ENST00000498614 FAM231BA6NCW3 169 aa12.97□□□□□ -0.33
COL6A1-206ENST00000498614 ZNF785A8K8V0 405 aa12.97□□□□□ -0.33
COL6A1-206ENST00000498614 PPIAL4GP0DN37 164 aa12.97□□□□□ -0.33
COL6A1-206ENST00000498614 PRB4P10163 310 aaPredicted RBP12.97□□□□□ -0.33
COL6A1-206ENST00000498614 HTR1DP28221 377 aa12.97□□□□□ -0.33
COL6A1-206ENST00000498614 LDLRAD2Q5SZI1 272 aa12.97□□□□□ -0.33
COL6A1-206ENST00000498614 GOLT1AQ6ZVE7 132 aa12.97□□□□□ -0.33
COL6A1-206ENST00000498614 TMEM116Q8NCL8 245 aa12.97□□□□□ -0.33
COL6A1-206ENST00000498614 NEU4Q8WWR8 484 aaPredicted RBP12.97□□□□□ -0.33
COL6A1-206ENST00000498614 ASCL2Q99929 193 aa12.97□□□□□ -0.33
COL6A1-206ENST00000498614 FBXL15Q9H469 300 aa12.97□□□□□ -0.33
COL6A1-206ENST00000498614 CST9LQ9H4G1 147 aa12.96□□□□□ -0.33
COL6A1-206ENST00000498614 OTORQ9NRC9 128 aa12.96□□□□□ -0.33
COL6A1-206ENST00000498614 MYO18BQ8IUG5 2567 aa12.96□□□□□ -0.33
COL6A1-206ENST00000498614 HLA-DRB1P01911 266 aa12.96□□□□□ -0.33
COL6A1-206ENST00000498614 LINC01545Q5VT33 79 aa12.96□□□□□ -0.33
COL6A1-206ENST00000498614 C16orf54Q6UWD8 224 aa12.96□□□□□ -0.33
COL6A1-206ENST00000498614 PPP1R27Q86WC6 154 aa12.96□□□□□ -0.33
COL6A1-206ENST00000498614 ZNF843Q8N446 348 aa12.96□□□□□ -0.33
COL6A1-206ENST00000498614 MS4A6AQ9H2W1 248 aa12.96□□□□□ -0.33
COL6A1-206ENST00000498614 HIGD1AQ9Y241 93 aa12.96□□□□□ -0.33
COL6A1-206ENST00000498614 TACC2O95359 2948 aa12.95□□□□□ -0.34
COL6A1-206ENST00000498614 LY6HO94772 140 aa12.95□□□□□ -0.34
COL6A1-206ENST00000498614 ARMS2P0C7Q2 107 aa12.95□□□□□ -0.34
COL6A1-206ENST00000498614 LYZP61626 148 aa12.95□□□□□ -0.34
COL6A1-206ENST00000498614 ARF6P62330 175 aa12.95□□□□□ -0.34
COL6A1-206ENST00000498614 PSG9Q00887 426 aa12.95□□□□□ -0.34
COL6A1-206ENST00000498614 COTL1Q14019 142 aa12.95□□□□□ -0.34
COL6A1-206ENST00000498614 RPEQ96AT9 228 aa12.95□□□□□ -0.34
COL6A1-206ENST00000498614 TEX22C9J3V5 150 aa12.95□□□□□ -0.34
COL6A1-206ENST00000498614 NCR2O95944 276 aa12.95□□□□□ -0.34
COL6A1-206ENST00000498614 PLP1P60201 277 aa12.95□□□□□ -0.34
COL6A1-206ENST00000498614 HIST1H1AQ02539 215 aaPredicted RBP12.95□□□□□ -0.34
COL6A1-206ENST00000498614 ZNF672Q499Z4 452 aaPredicted RBP12.95□□□□□ -0.34
COL6A1-206ENST00000498614 SRSF12Q8WXF0 261 aaKnown RBP12.95□□□□□ -0.34
COL6A1-206ENST00000498614 ONECUT1Q9UBC0 465 aa12.95□□□□□ -0.34
COL6A1-206ENST00000498614 SNAI2O43623 268 aa12.94□□□□□ -0.34
COL6A1-206ENST00000498614 CD5LO43866 347 aa12.94□□□□□ -0.34
COL6A1-206ENST00000498614 GPR183P32249 361 aa12.94□□□□□ -0.34
COL6A1-206ENST00000498614 C2orf91Q6ZV80 131 aa12.94□□□□□ -0.34
COL6A1-206ENST00000498614 ZC2HC1AQ96GY0 325 aa12.94□□□□□ -0.34
COL6A1-206ENST00000498614 F11RQ9Y624 299 aaKnown RBP12.94□□□□□ -0.34
COL6A1-206ENST00000498614 DCHS2Q6V1P9 2916 aa12.94□□□□□ -0.34
COL6A1-206ENST00000498614 UTP20O75691 2785 aaKnown RBP12.94□□□□□ -0.34
COL6A1-206ENST00000498614 KMT2BQ9UMN6 2715 aaPredicted RBP12.94□□□□□ -0.34
COL6A1-206ENST00000498614 PPBPP02775 128 aa12.94□□□□□ -0.34
COL6A1-206ENST00000498614 RPS20P60866 119 aaKnown RBP12.94□□□□□ -0.34
COL6A1-206ENST00000498614 OCIAD2Q56VL3 154 aa12.94□□□□□ -0.34
COL6A1-206ENST00000498614 TRAV8-6A0A0B4J262 113 aa12.93□□□□□ -0.34
COL6A1-206ENST00000498614 A0A1B0GUT8 65 aa12.93□□□□□ -0.34
COL6A1-206ENST00000498614 HOXB4P17483 251 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-206ENST00000498614 PLGLAQ15195 96 aa12.93□□□□□ -0.34
COL6A1-206ENST00000498614 IGFBPL1Q8WX77 278 aa12.93□□□□□ -0.34
COL6A1-206ENST00000498614 ZNF747Q9BV97 191 aa12.93□□□□□ -0.34
COL6A1-206ENST00000498614 SLC25A39Q9BZJ4 359 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-206ENST00000498614 COX8AP10176 69 aa12.93□□□□□ -0.34
COL6A1-206ENST00000498614 ARL6IP6Q8N6S5 226 aa12.93□□□□□ -0.34
COL6A1-206ENST00000498614 AP5S1Q9NUS5 200 aa12.93□□□□□ -0.34
COL6A1-206ENST00000498614 ABCA4P78363 2273 aa12.93□□□□□ -0.34
COL6A1-206ENST00000498614 C17orf77Q96MU5 243 aa12.92□□□□□ -0.34
COL6A1-206ENST00000498614 ABCA1O95477 2261 aa12.92□□□□□ -0.34
COL6A1-206ENST00000498614 USP9XQ93008 2570 aaPredicted RBP12.92□□□□□ -0.34
COL6A1-206ENST00000498614 IGLC1P0CG04 106 aa12.92□□□□□ -0.34
COL6A1-206ENST00000498614 FAM106CPP0CH98 169 aa12.92□□□□□ -0.34
COL6A1-206ENST00000498614 FAM106AQ4KMX7 169 aa12.92□□□□□ -0.34
COL6A1-206ENST00000498614 TMEM14CQ9P0S9 112 aa12.92□□□□□ -0.34
COL6A1-206ENST00000498614 ARHGAP32A7KAX9 2087 aa12.91□□□□□ -0.34
COL6A1-206ENST00000498614 ANKHD1Q8IWZ3 2542 aaKnown RBP12.91□□□□□ -0.34
COL6A1-206ENST00000498614 RIGQ13278 110 aa12.91□□□□□ -0.34
COL6A1-206ENST00000498614 VPS25Q9BRG1 176 aa12.91□□□□□ -0.34
COL6A1-206ENST00000498614 TIMM23O14925 209 aa12.91□□□□□ -0.34
COL6A1-206ENST00000498614 CRYBG3Q68DQ2 2970 aa12.9□□□□□ -0.34
COL6A1-206ENST00000498614 LOXL1Q08397 574 aaPredicted RBP12.9□□□□□ -0.34
COL6A1-206ENST00000498614 FA2HQ7L5A8 372 aa12.9□□□□□ -0.34
COL6A1-206ENST00000498614 BPIFA4PQ86YQ2 179 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms