RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 PSG3Q16557 428 aa7.95□□□□□ -1.14
CDK9-205ENST00000498339 Q6ZTI0 123 aa7.95□□□□□ -1.14
CDK9-205ENST00000498339 RPUSD4Q96CM3 377 aaKnown RBP7.95□□□□□ -1.14
CDK9-205ENST00000498339 VSIG2Q96IQ7 327 aa7.95□□□□□ -1.14
CDK9-205ENST00000498339 PARD6GQ9BYG4 376 aaPredicted RBP7.95□□□□□ -1.14
CDK9-205ENST00000498339 EXTL2Q9UBQ6 330 aa7.95□□□□□ -1.14
CDK9-205ENST00000498339 HIGD1AQ9Y241 93 aa7.95□□□□□ -1.14
CDK9-205ENST00000498339 KCNIP3Q9Y2W7 256 aa7.95□□□□□ -1.14
CDK9-205ENST00000498339 ICOSQ9Y6W8 199 aa7.95□□□□□ -1.14
CDK9-205ENST00000498339 A0A0B4J2A0 478 aa7.94□□□□□ -1.14
CDK9-205ENST00000498339 SMCO3A2RU48 225 aa7.94□□□□□ -1.14
CDK9-205ENST00000498339 NPIPB6E9PJ23 425 aa7.94□□□□□ -1.14
CDK9-205ENST00000498339 OR5G3P0C626 314 aa7.94□□□□□ -1.14
CDK9-205ENST00000498339 NCS1P62166 190 aa7.94□□□□□ -1.14
CDK9-205ENST00000498339 KIR3DS1Q14943 382 aa7.94□□□□□ -1.14
CDK9-205ENST00000498339 SERTAD4-AS1Q5TG53 156 aa7.94□□□□□ -1.14
CDK9-205ENST00000498339 GFI1BQ5VTD9 330 aa7.94□□□□□ -1.14
CDK9-205ENST00000498339 MZT2AQ6P582 158 aa7.94□□□□□ -1.14
CDK9-205ENST00000498339 LYZL2Q7Z4W2 148 aa7.94□□□□□ -1.14
CDK9-205ENST00000498339 SHPKQ9UHJ6 478 aa7.94□□□□□ -1.14
CDK9-205ENST00000498339 LY96Q9Y6Y9 160 aa7.94□□□□□ -1.14
CDK9-205ENST00000498339 PAX4O43316 350 aa7.93□□□□□ -1.14
CDK9-205ENST00000498339 PSCAO43653 123 aa7.93□□□□□ -1.14
CDK9-205ENST00000498339 PLA2G1BP04054 148 aaKnown RBP7.93□□□□□ -1.14
CDK9-205ENST00000498339 RPP30P78346 268 aaKnown RBP7.93□□□□□ -1.14
CDK9-205ENST00000498339 TMEM182Q6ZP80 229 aaPredicted RBP7.93□□□□□ -1.14
CDK9-205ENST00000498339 YIPF6Q96EC8 236 aa7.93□□□□□ -1.14
CDK9-205ENST00000498339 SHANK2-AS3Q9BTD1 123 aa7.93□□□□□ -1.14
CDK9-205ENST00000498339 TMEM70Q9BUB7 260 aa7.93□□□□□ -1.14
CDK9-205ENST00000498339 VCX3AQ9NNX9 186 aa7.93□□□□□ -1.14
CDK9-205ENST00000498339 MSRB1Q9NZV6 116 aa7.93□□□□□ -1.14
CDK9-205ENST00000498339 A0A087X0K7 114 aa7.92□□□□□ -1.14
CDK9-205ENST00000498339 TRGV1A0A0A0MS02 117 aa7.92□□□□□ -1.14
CDK9-205ENST00000498339 TRAV12-3A0A0B4J271 114 aa7.92□□□□□ -1.14
CDK9-205ENST00000498339 KRTAP29-1A8MX34 341 aaPredicted RBP7.92□□□□□ -1.14
CDK9-205ENST00000498339 IL5P05113 134 aa7.92□□□□□ -1.14
CDK9-205ENST00000498339 ANXA3P12429 323 aa7.92□□□□□ -1.14
CDK9-205ENST00000498339 ANXA7P20073 488 aaKnown RBP7.92□□□□□ -1.14
CDK9-205ENST00000498339 VBP1P61758 197 aa7.92□□□□□ -1.14
CDK9-205ENST00000498339 C15orf40Q8WUR7 153 aa7.92□□□□□ -1.14
CDK9-205ENST00000498339 AP3S1Q92572 193 aa7.92□□□□□ -1.14
CDK9-205ENST00000498339 LINC00467Q9BRT7 94 aa7.92□□□□□ -1.14
CDK9-205ENST00000498339 GPR132Q9UNW8 380 aa7.92□□□□□ -1.14
CDK9-205ENST00000498339 HYPMO75409 117 aa7.91□□□□□ -1.14
CDK9-205ENST00000498339 MED6O75586 246 aa7.91□□□□□ -1.14
CDK9-205ENST00000498339 IGHV3-53P01767 116 aa7.91□□□□□ -1.14
CDK9-205ENST00000498339 SNRPCP09234 159 aaKnown RBP7.91□□□□□ -1.14
CDK9-205ENST00000498339 LINC00869P0C866 280 aa7.91□□□□□ -1.14
CDK9-205ENST00000498339 SRPXP78539 464 aa7.91□□□□□ -1.14
CDK9-205ENST00000498339 CYP2G1PQ6ZSU1 146 aa7.91□□□□□ -1.14
CDK9-205ENST00000498339 ACOT7LQ6ZUV0 252 aa7.91□□□□□ -1.14
CDK9-205ENST00000498339 S100A7AQ86SG5 101 aa7.91□□□□□ -1.14
CDK9-205ENST00000498339 PRRT1Q99946 306 aa7.91□□□□□ -1.14
CDK9-205ENST00000498339 PLA2G2DQ9UNK4 145 aa7.91□□□□□ -1.14
CDK9-205ENST00000498339 FUT9Q9Y231 359 aa7.91□□□□□ -1.14
CDK9-205ENST00000498339 PMS2P5A8MQ11 134 aa7.9□□□□□ -1.14
CDK9-205ENST00000498339 H3BP45 60 aa7.9□□□□□ -1.14
CDK9-205ENST00000498339 WRBO00258 174 aa7.9□□□□□ -1.14
CDK9-205ENST00000498339 AKAIN1P0CW23 69 aa7.9□□□□□ -1.14
CDK9-205ENST00000498339 EVI2AP22794 236 aa7.9□□□□□ -1.14
CDK9-205ENST00000498339 LEPP41159 167 aa7.9□□□□□ -1.14
CDK9-205ENST00000498339 DAZ2Q13117 558 aaKnown RBP7.9□□□□□ -1.14
CDK9-205ENST00000498339 SPANXN5Q5MJ07 72 aa7.9□□□□□ -1.14
CDK9-205ENST00000498339 LCN15Q6UWW0 184 aa7.9□□□□□ -1.14
CDK9-205ENST00000498339 CLVS1Q8IUQ0 354 aaPredicted RBP7.9□□□□□ -1.14
CDK9-205ENST00000498339 ZNF680Q8NEM1 530 aa7.9□□□□□ -1.14
CDK9-205ENST00000498339 OR51S1Q8NGJ8 323 aa7.9□□□□□ -1.14
CDK9-205ENST00000498339 DEFB104AQ8WTQ1 72 aa7.9□□□□□ -1.14
CDK9-205ENST00000498339 CIB3Q96Q77 187 aaPredicted RBP7.9□□□□□ -1.14
CDK9-205ENST00000498339 PYGO2Q9BRQ0 406 aa7.9□□□□□ -1.14
CDK9-205ENST00000498339 GSN-AS1Q9NRJ2 163 aa7.9□□□□□ -1.14
CDK9-205ENST00000498339 ZNF324O75467 553 aaPredicted RBP7.89□□□□□ -1.15
CDK9-205ENST00000498339 CXCL2P19875 107 aa7.89□□□□□ -1.15
CDK9-205ENST00000498339 LYPD5Q6UWN5 251 aa7.89□□□□□ -1.15
CDK9-205ENST00000498339 WFDC10BQ8IUB3 73 aa7.89□□□□□ -1.15
CDK9-205ENST00000498339 LINC00528Q8N1L1 170 aa7.89□□□□□ -1.15
CDK9-205ENST00000498339 NTN5Q8WTR8 489 aaPredicted RBP7.89□□□□□ -1.15
CDK9-205ENST00000498339 SCGB3A2Q96PL1 93 aa7.89□□□□□ -1.15
CDK9-205ENST00000498339 SLC50A1Q9BRV3 221 aa7.89□□□□□ -1.15
CDK9-205ENST00000498339 ARL6Q9H0F7 186 aa7.89□□□□□ -1.15
CDK9-205ENST00000498339 DNAH8Q96JB1 4490 aa7.89□□□□□ -1.15
CDK9-205ENST00000498339 PRAC2D3DTV9 90 aa7.88□□□□□ -1.15
CDK9-205ENST00000498339 PRSS46E5RG02 174 aa7.88□□□□□ -1.15
CDK9-205ENST00000498339 RGS5O15539 181 aa7.88□□□□□ -1.15
CDK9-205ENST00000498339 SSBP1Q04837 148 aaKnown RBP7.88□□□□□ -1.15
CDK9-205ENST00000498339 MRPL23Q16540 153 aaKnown RBP7.88□□□□□ -1.15
CDK9-205ENST00000498339 NEGR1Q7Z3B1 354 aa7.88□□□□□ -1.15
CDK9-205ENST00000498339 ZBTB8BQ8NAP8 495 aaPredicted RBP7.88□□□□□ -1.15
CDK9-205ENST00000498339 FUNDC2Q9BWH2 189 aa7.88□□□□□ -1.15
CDK9-205ENST00000498339 ZNF331Q9NQX6 463 aaPredicted RBP7.88□□□□□ -1.15
CDK9-205ENST00000498339 MCUBQ9NWR8 336 aa7.88□□□□□ -1.15
CDK9-205ENST00000498339 PRO0255Q9UI72 69 aa7.88□□□□□ -1.15
CDK9-205ENST00000498339 SCP2D1Q9UJQ7 156 aa7.88□□□□□ -1.15
CDK9-205ENST00000498339 RNF24Q9Y225 148 aa7.88□□□□□ -1.15
CDK9-205ENST00000498339 PIGBOS1A0A0B4J2F0 54 aa7.87□□□□□ -1.15
CDK9-205ENST00000498339 LINC00854A0A1B0GVQ3 168 aa7.87□□□□□ -1.15
CDK9-205ENST00000498339 H3BTX0 84 aa7.87□□□□□ -1.15
CDK9-205ENST00000498339 SYNGR2O43760 224 aa7.87□□□□□ -1.15
CDK9-205ENST00000498339 CRYGDP07320 174 aa7.87□□□□□ -1.15
CDK9-205ENST00000498339 SRIP30626 198 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms