RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 SAP30O75446 220 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 HSBP1O75506 76 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 TNFRSF6BO95407 300 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 LINC00869P0C866 280 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 CBLN1P23435 193 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 NPY1RP25929 384 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 KRTAP5-9P26371 169 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 GNG4P50150 75 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 TMEM50BP56557 158 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 RPL31P62899 125 aaKnown RBP3.89□□□□□ -1.79
CSMD3-208ENST00000497026 ZNF146Q15072 292 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 KISS1Q15726 138 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 LRRC75BQ2VPJ9 315 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 Q6ZVH6 145 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 TPRX1Q8N7U7 411 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 STXBP6Q8NFX7 210 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 OR4F17Q8NGA8 305 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 OR5D13Q8NGL4 314 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 FAM110DQ8TAY7 271 aaPredicted RBP3.89□□□□□ -1.79
CSMD3-208ENST00000497026 DERL1Q9BUN8 251 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 MS4A6AQ9H2W1 248 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 SLC25A22Q9H936 323 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 TP53TG3Q9ULZ0 132 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 LY96Q9Y6Y9 160 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 COL6A5A8TX70 2615 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 A0A1W2PRD5 423 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 A0A1W2PRF3 423 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 A0A1W2PRM7 423 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 C7orf71A4D174 169 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 C17orf98A8MV24 154 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 H0YJW9 148 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 H3BRM9 83 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 M0R2Z0 102 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 HMGB3O15347 200 aaKnown RBP3.88□□□□□ -1.79
CSMD3-208ENST00000497026 SLC25A17O43808 307 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 OR2H2O95918 312 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 IGHV4-59P01825 116 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 CRYGCP07315 174 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 AZU1P20160 251 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 NTF3P20783 257 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 HTR1DP28221 377 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 SAA4P35542 130 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 ARL3P36405 182 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 IER3P46695 156 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 REG1BP48304 166 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 SLC38A11Q08AI6 406 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 HSD52Q0P140 79 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 MPV17L2Q567V2 206 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 NMSQ5H8A3 153 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 UFSP1Q6NVU6 142 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 Q6P435 159 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 ASCL4Q6XD76 172 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 MOB1BQ7L9L4 216 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 NEGR1Q7Z3B1 354 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 TBC1D26Q86UD7 250 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 RTN4RL2Q86UN3 420 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 MKXQ8IYA7 352 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 Q8IYB0 196 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 COQ2Q96H96 371 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 TMEM147Q9BVK8 224 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 GNB4Q9HAV0 340 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 PSENENQ9NZ42 101 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 C1RLQ9NZP8 487 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 ZNRD1Q9P1U0 126 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 NAT8BQ9UHF3 227 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 RFNGQ9Y644 331 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 MXRA5Q9NR99 2828 aa3.88□□□□□ -1.79
CSMD3-208ENST00000497026 MUC21A0A0G2JKD1 596 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 MUC21A0A140T8X8 626 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 A0A1W2PP11 408 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 A0A1W2PS18 150 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 OR4C46A6NHA9 309 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 OR11H12B2RN74 326 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 C9JCJ5 164 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 FAM90A26D6RGX4 464 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 J3KRW8 73 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 SH2D1BO14796 132 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 RAB29O14966 203 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 NPFFO15130 113 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 CHST1O43916 411 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 PAGE4O60829 102 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 PPYP01298 95 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 STAG3L2P0CL84 134 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 HIST1H1EP10412 219 aaKnown RBP3.87□□□□□ -1.79
CSMD3-208ENST00000497026 UBE2E1P51965 193 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 CRYBA4P53673 196 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 EDDM3BP56851 147 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 MEF2CQ06413 473 aaPredicted RBP3.87□□□□□ -1.79
CSMD3-208ENST00000497026 SMAGPQ0VAQ4 97 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 EDDM3AQ14507 147 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 LTC4SQ16873 150 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 PIGYQ3MUY2 71 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 Q56UQ5 140 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 MUC21Q5SSG8 566 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 UTF1Q5T230 341 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 KRTAP5-4Q6L8H1 288 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 RASL11AQ6T310 242 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 Q6ZTC4 211 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 BPIFA4PQ86YQ2 179 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 DYNAPQ8N1N2 210 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms